Comparing WP_012470645.1 NCBI__GCF_000020385.1:WP_012470645.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3eleA Crystal structure of amino transferase (rer070207001803) from eubacterium rectale at 2.10 a resolution
38% identity, 95% coverage: 12:389/397 of query aligns to 13:392/398 of 3eleA
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
35% identity, 88% coverage: 39:389/397 of query aligns to 36:381/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
35% identity, 88% coverage: 39:389/397 of query aligns to 36:381/382 of 1gc3A
Sites not aligning to the query:
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
35% identity, 88% coverage: 39:389/397 of query aligns to 36:381/382 of 1b5oA
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
35% identity, 88% coverage: 39:389/397 of query aligns to 36:381/385 of Q56232
Sites not aligning to the query:
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
35% identity, 88% coverage: 39:389/397 of query aligns to 36:381/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
35% identity, 88% coverage: 39:389/397 of query aligns to 36:381/382 of 1bjwA
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
33% identity, 96% coverage: 14:395/397 of query aligns to 11:387/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
33% identity, 96% coverage: 14:395/397 of query aligns to 11:387/388 of 1gd9A
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
30% identity, 90% coverage: 33:389/397 of query aligns to 36:378/384 of 1o4sB
1j32A Aspartate aminotransferase from phormidium lapideum
30% identity, 89% coverage: 35:389/397 of query aligns to 31:383/388 of 1j32A
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
30% identity, 90% coverage: 35:390/397 of query aligns to 32:396/400 of Q02635
Sites not aligning to the query:
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
30% identity, 90% coverage: 35:390/397 of query aligns to 31:395/399 of 6f77A
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
29% identity, 88% coverage: 42:390/397 of query aligns to 39:390/391 of 8wkjA
1xi9C Alanine aminotransferase from pyrococcus furiosus pfu-1397077-001
28% identity, 90% coverage: 35:392/397 of query aligns to 29:392/393 of 1xi9C
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
25% identity, 93% coverage: 20:390/397 of query aligns to 21:395/402 of P14909
Sites not aligning to the query:
1v2fA Crystal structure of t.Th hb8 glutamine aminotransferase complex with 3-phenylpropionate (see paper)
29% identity, 87% coverage: 27:373/397 of query aligns to 21:351/368 of 1v2fA
Sites not aligning to the query:
1v2eA Crystal structure of t.Th hb8 glutamine aminotransferase complex with a-keto-g-methylthiobutyrate (see paper)
29% identity, 87% coverage: 27:373/397 of query aligns to 21:351/368 of 1v2eA
Sites not aligning to the query:
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
28% identity, 88% coverage: 42:390/397 of query aligns to 49:403/410 of P58350
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
28% identity, 85% coverage: 42:380/397 of query aligns to 37:386/402 of 5wmiA
Sites not aligning to the query:
>WP_012470645.1 NCBI__GCF_000020385.1:WP_012470645.1
MAIANKIAGYISRSSWIRKMFEEGERLRQEFGADNVYDFTLGNPDVEPPQALHTALLQLA
QHPLPGMHRYMNNAGYPETRAAVARKLAADSGLEVTAAHVIMTCGAGGALNVVLKTILNP
GEEVIILAPYFVEYKFYIDNHGGVPVEVWTNRETFRLDLAAIEAAITTKTRAIIVNSPNN
PTGVIYTAEELAALGELVKRAQARTGHQVYVISDEPYARLSYDGAKVPNIFPLIESSVVV
TSHSKDLALPGERIGYLAANPRMATAMQFMEGAVFCNRTLGFVNAPALMQRLVADLQDVS
VDSSLYQDKRDLFYTTLTGLGFSMVKPDGAFYLFPKSPFADDVEFVKLAQKHHILLVPGS
GFGAPGYFRIAYCVDRGMIERSLPAWERLAVEAGLKK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory