SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_012566209.1 NCBI__GCF_000016185.1:WP_012566209.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

P18079 5-aminolevulinate synthase; 5-aminolevulinic acid synthase; Delta-ALA synthase; Delta-aminolevulinate synthase; EC 2.3.1.37 from Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) (see paper)
58% identity, 100% coverage: 1:404/405 of query aligns to 1:405/409 of P18079

query
sites
P18079

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R21 (= R21) binding substrate
S137 (= S138) binding substrate
K156 (= K157) binding substrate
S189 (= S190) binding in other chain
H217 (= H218) binding in other chain
T245 (= T246) binding in other chain
K248 (= K249) active site
S277 (≠ T278) binding pyridoxal 5'-phosphate
T278 (= T279) binding pyridoxal 5'-phosphate
T365 (= T364) binding substrate

2bwoB 5-aminolevulinate synthase from rhodobacter capsulatus in complex with succinyl-coa (see paper)
58% identity, 98% coverage: 1:398/405 of query aligns to 1:399/399 of 2bwoB

query
sites
2bwoB

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active site: N54 (= N55), H142 (= H143), E185 (= E186), S189 (= S190), D214 (= D215), H217 (= H218), K248 (= K249)
binding pyridoxal-5'-phosphate: S114 (= S115), A115 (≠ G116), Y116 (= Y117), H142 (= H143), E185 (= E186), S189 (= S190), D214 (= D215), V216 (= V217), H217 (= H218), T245 (= T246), K248 (= K249)
binding succinyl-coenzyme a: R21 (= R21), T83 (= T84), N85 (= N86), S137 (= S138), S139 (≠ A140), H142 (= H143), I146 (= I147), K150 (≠ R151), K156 (= K157), I158 (= I159), F276 (= F277), F363 (≠ Y362), P364 (= P363), T365 (= T364)

2bwpA 5-aminolevulinate synthase from rhodobacter capsulatus in complex with glycine (see paper)
58% identity, 98% coverage: 1:397/405 of query aligns to 1:398/398 of 2bwpA

query
sites
2bwpA

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active site: N54 (= N55), H142 (= H143), E185 (= E186), S189 (= S190), D214 (= D215), H217 (= H218), K248 (= K249)
binding n-glycine-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-yl-methane]: N54 (= N55), A115 (≠ G116), Y116 (= Y117), H142 (= H143), E185 (= E186), D214 (= D215), V216 (= V217), H217 (= H218), T245 (= T246), K248 (= K249), S277 (≠ T278), T278 (= T279)

P08680 5-aminolevulinate synthase, erythroid-specific, mitochondrial; ALAS-E; 5-aminolevulinic acid synthase 2; Delta-ALA synthase 2; Delta-aminolevulinate synthase 2; EC 2.3.1.37 from Mus musculus (Mouse) (see 2 papers)
55% identity, 98% coverage: 3:399/405 of query aligns to 145:543/587 of P08680

query
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P08680

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K391 (= K249) modified: N6-(pyridoxal phosphate)lysine; mutation K->A,H: Abolishes enzyme activity.

Sites not aligning to the query:

1:49 modified: transit peptide, Mitochondrion

P22557 5-aminolevulinate synthase, erythroid-specific, mitochondrial; ALAS-E; 5-aminolevulinic acid synthase 2; Delta-ALA synthase 2; Delta-aminolevulinate synthase 2; EC 2.3.1.37 from Homo sapiens (Human) (see 11 papers)
54% identity, 98% coverage: 1:397/405 of query aligns to 143:541/587 of P22557

query
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P22557

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K156 (≠ L14) to E: in SIDBA1; significantly reduced activity
R170 (= R28) to H: in SIDBA1; significantly increased thermosensitivity
R204 (≠ Q62) to Q: in SIDBA1; 15% to 35% activity of wild-type; dbSNP:rs1338391423
R218 (≠ K76) to H: in SIDBA1; significantly increased thermosensitivity; dbSNP:rs185504937
E242 (= E100) to K: in SIDBA1; significantly reduced activity
C258 (≠ G116) binding in other chain
F259 (≠ Y117) binding in other chain
D263 (≠ E121) to N: in SIDBA1; significantly reduced activity
P339 (= P197) to L: in SIDBA1; significantly reduced activity
H360 (= H218) binding in other chain
R375 (= R233) to C: in SIDBA1; significantly reduced activity
T388 (= T246) binding in other chain
K391 (= K249) modified: N6-(pyridoxal phosphate)lysine
R411 (= R269) to C: in SIDBA1; 12% to 25% activity of wild-type; dbSNP:rs137852305; to H: in SIDBA1; significantly reduced activity
T420 (= T278) binding pyridoxal 5'-phosphate
T421 (= T279) binding pyridoxal 5'-phosphate
R452 (≠ E308) to G: in SIDBA1; does not affect activity
R511 (= R367) mutation to E: 2-fold increased enzyme activity with a lower specificity for glycine and higher for succinyl-CoA.
P520 (= P376) to L: in SIDBA1; likely benign; associated in cis with H-560 in a patient; dbSNP:rs201062903

Sites not aligning to the query:

1:49 modified: transit peptide, Mitochondrion
560 R → H: in SIDBA1; associated in cis with L-520 in a patient; dbSNP:rs892041887
572 R → H: in SIDBA1; does not affect activity
586 Y → F: rare variant found in a congenital erythropoietic porphyria patient that also carries UROS mutations R-73 and Q-248; increased enzyme activity; dbSNP:rs139596860

5qrdB Pandda analysis group deposition -- crystal structure of human alas2a in complex with z1328968520
53% identity, 100% coverage: 1:403/405 of query aligns to 7:410/428 of 5qrdB

query
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5qrdB

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L

V

A

W

W

S

T

R

A

-

V

-

G

-

L

-

P

L

L

E

Q

I

C

R

R

binding pyridoxal-5'-phosphate: S116 (= S115), C117 (≠ G116), F118 (≠ Y117), N121 (= N120), H144 (= H143), E187 (= E186), D216 (= D215), V218 (= V217), H219 (= H218), T247 (= T246), K250 (= K249), T279 (= T278), T280 (= T279)

Sites not aligning to the query:

binding 4-[(2-methylsulfonylimidazol-1-yl)methyl]-1,3-thiazole: 423, 424

5qrbB Pandda analysis group deposition -- crystal structure of human alas2a in complex with z2856434868
53% identity, 100% coverage: 1:403/405 of query aligns to 7:410/428 of 5qrbB

query
sites
5qrbB

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R
x
W

V

A

G

D

E
x
A

F

Y

P

P

V
x
F

A

A

S

Q

F

H

F

F

P

-

E

-

P

-

E

-

A

-

T

S

P

S

R

K

D
|
D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T
|
T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

R

A

-

V

-

G

-

L

-

P

L

L

E

Q

I

C

R

R

binding 1-ethyl-N-(2-fluorophenyl)piperidin-4-amine: W35 (≠ R29), A38 (≠ E32), F41 (≠ V35), D49 (= D48)
binding pyridoxal-5'-phosphate: S116 (= S115), C117 (≠ G116), F118 (≠ Y117), H144 (= H143), E187 (= E186), S191 (= S190), D216 (= D215), V218 (= V217), H219 (= H218), T247 (= T246), K250 (= K249), T279 (= T278), T280 (= T279)

5qr8B Pandda analysis group deposition -- crystal structure of human alas2a in complex with z57258487
53% identity, 100% coverage: 1:403/405 of query aligns to 7:410/428 of 5qr8B

query
sites
5qr8B

M
x
F

D
x
S

Y

Y

E
x
D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R

W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

-

E

-

P

-

E

-

A

-

T

S

P

S

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S

S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T
|
T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

R

A

-

V

-

G

-

L

-

P

L

L

E

Q

I

C

R

R

binding N-{[4-(dimethylamino)phenyl]methyl}-4H-1,2,4-triazol-4-amine: F7 (≠ M1), S8 (≠ D2), D10 (≠ E4)
binding pyridoxal-5'-phosphate: C117 (≠ G116), F118 (≠ Y117), H144 (= H143), E187 (= E186), S191 (= S190), D216 (= D215), V218 (= V217), H219 (= H218), T247 (= T246), K250 (= K249), T279 (= T278), T280 (= T279)

Sites not aligning to the query:

binding N-{[4-(dimethylamino)phenyl]methyl}-4H-1,2,4-triazol-4-amine: 6

5qr7B Pandda analysis group deposition -- crystal structure of human alas2a in complex with z57299529
53% identity, 100% coverage: 1:403/405 of query aligns to 7:410/428 of 5qr7B

query
sites
5qr7B

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R
x
W

V

A

G

D

E
x
A

F

Y

P

P

V
x
F

A

A

S

Q

F

H

F

F

P

-

E

-

P

-

E

-

A

-

T

S

P

S

R

K

D
|
D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S

S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S

S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E
x
H

K

Q

H

Y

G

G

A

A

M
x
L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H
|
H

R

K

L

I

T
x
D

V

I

I

I

E

S

G

G

T

T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S
x
T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

R

A

-

V

-

G

-

L

-

P

L

L

E

Q

I

C

R

R

binding ~{N}-(2-phenylethyl)-1~{H}-benzimidazol-2-amine: W35 (≠ R29), A38 (≠ E32), F41 (≠ V35), D49 (= D48), H207 (≠ E206), L212 (≠ M211), H239 (= H238), D242 (≠ T241), T262 (≠ S261)
binding pyridoxal-5'-phosphate: C117 (≠ G116), F118 (≠ Y117), H144 (= H143), E187 (= E186), D216 (= D215), V218 (= V217), H219 (= H218), K250 (= K249), T279 (= T278), T280 (= T279)

5qr5B Pandda analysis group deposition -- crystal structure of human alas2a in complex with z2241115980
53% identity, 100% coverage: 1:403/405 of query aligns to 7:410/428 of 5qr5B

query
sites
5qr5B

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R
x
W

V

A

G

D

E

A

F

Y

P

P

V
x
F

A

A

S

Q

F

H

F

F

P

-

E

-

P

-

E

-

A

-

T

S

P

S

R

K

D
|
D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

A

N
|
N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T

T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

R

A

-

V

-

G

-

L

-

P

L

L

E

Q

I

C

R

R

binding 1-[(furan-2-yl)methyl]-4-(methylsulfonyl)piperazine: W35 (≠ R29), F41 (≠ V35), D49 (= D48)
binding pyridoxal-5'-phosphate: S116 (= S115), C117 (≠ G116), F118 (≠ Y117), N121 (= N120), H144 (= H143), E187 (= E186), S191 (= S190), D216 (= D215), V218 (= V217), H219 (= H218), K250 (= K249), T279 (= T278), T280 (= T279)

5qr4B Pandda analysis group deposition -- crystal structure of human alas2a in complex with z2856434826
53% identity, 100% coverage: 1:403/405 of query aligns to 7:410/428 of 5qr4B

query
sites
5qr4B

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R
x
W

V

A

G
x
D

E
x
A

F

Y

P

P

V
x
F

A

A

S

Q

F

H

F

F

P

-

E

-

P

-

E

-

A

-

T

S

P

S

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S

S

G
x
C

Y
x
F

I

V

S

A

N
|
N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T
|
T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

R

A

-

V

-

G

-

L

-

P

L

L

E

Q

I

C

R

R

binding [4-(propan-2-yl)piperazin-1-yl](thiophen-2-yl)methanone: W35 (≠ R29), D37 (≠ G31), A38 (≠ E32), F41 (≠ V35)
binding pyridoxal-5'-phosphate: C117 (≠ G116), F118 (≠ Y117), N121 (= N120), H144 (= H143), E187 (= E186), S191 (= S190), D216 (= D215), V218 (= V217), H219 (= H218), T247 (= T246), K250 (= K249), T279 (= T278), T280 (= T279)

5qqzB Pandda analysis group deposition -- crystal structure of human alas2a in complex with z1675346324
53% identity, 100% coverage: 1:403/405 of query aligns to 7:410/428 of 5qqzB

query
sites
5qqzB

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R
x
W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

-

E

-

P

-

E

-

A

-

T

S

P

S

R

K

D
|
D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S

S

G
x
C

Y
x
F

I

V

S

A

N
|
N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S

S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T

T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

R

A

-

V

-

G

-

L

-

P

L

L

E

Q

I

C

R

R

binding trans-3-[(2,6-dimethylpyrimidin-4-yl)(methyl)amino]cyclobutan-1-ol: W35 (≠ R29), D49 (= D48)
binding pyridoxal-5'-phosphate: C117 (≠ G116), F118 (≠ Y117), N121 (= N120), H144 (= H143), E187 (= E186), D216 (= D215), V218 (= V217), H219 (= H218), K250 (= K249), T279 (= T278), T280 (= T279)

5qqrB Pandda analysis group deposition -- crystal structure of human alas2a in complex with z1171217421
54% identity, 98% coverage: 1:397/405 of query aligns to 7:400/429 of 5qqrB

query
sites
5qqrB

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

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L

V

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N

R

R

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W

V

A

G

D

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A

F

Y

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P

V

F

A

A

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Q

F

H

F

F

P

-

E

-

P

-

E

-

A

-

T

S

P

S

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

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Q

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H

H

P

P

V

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V

V

I

L

G

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S

A

M

T

I

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A

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L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

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C

D

D

V

V

A

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H

K

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H

Y

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G

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A

M

L

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T

Y

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L

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|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

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I

A

G

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R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T
|
T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

binding pyridoxal-5'-phosphate: S116 (= S115), C117 (≠ G116), F118 (≠ Y117), H144 (= H143), E187 (= E186), S191 (= S190), D216 (= D215), V218 (= V217), H219 (= H218), T247 (= T246), K250 (= K249), T279 (= T278), T280 (= T279)

Sites not aligning to the query:

binding 1-[(2-methyl-1,3-thiazol-5-yl)methyl]piperazine: 407, 408, 409

6hrhA Structure of human erythroid-specific 5'-aminolevulinate synthase, alas2
54% identity, 98% coverage: 1:397/405 of query aligns to 7:399/429 of 6hrhA

query
sites
6hrhA

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

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S

D

Q

K

I

I

D

M

G

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L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R

W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

S

E

-

P

-

E

-

A

-

T

-

P

-

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

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Y

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N

K

P

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K

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P

K

K

L

I

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V

A

A

F

F

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|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

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P

I

L

A

E

E

E

I

L

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C

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D

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V

A

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K

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H

Y

G

G

A

A

M

L

T

T

Y

F

L

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D
|
D

E

E

V

V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

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S

G

G

T
|
T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

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A

D

L

L

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V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

binding pyridoxal-5'-phosphate: S115 (= S115), C116 (≠ G116), F117 (≠ Y117), H143 (= H143), E186 (= E186), S190 (= S190), D215 (= D215), H218 (= H218), T246 (= T246), K249 (= K249), T278 (= T278), T279 (= T279)

5qreA Pandda analysis group deposition -- crystal structure of human alas2a in complex with z117233350
54% identity, 98% coverage: 1:397/405 of query aligns to 7:399/429 of 5qreA

query
sites
5qreA

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R

W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

S

E

-

P

-

E

-

A

-

T

-

P

-

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S

S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T
|
T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

binding pyridoxal-5'-phosphate: C116 (≠ G116), F117 (≠ Y117), H143 (= H143), E186 (= E186), S190 (= S190), D215 (= D215), V217 (= V217), H218 (= H218), T246 (= T246), K249 (= K249), T278 (= T278), T279 (= T279)

Sites not aligning to the query:

binding 3-ethyl-5-methyl-N-(5-methyl-1,2-oxazol-3-yl)-1,2-oxazole-4-carboxamide: 424, 425

5qrcA Pandda analysis group deposition -- crystal structure of human alas2a in complex with z31721798
54% identity, 98% coverage: 1:397/405 of query aligns to 7:399/429 of 5qrcA

query
sites
5qrcA

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R

W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

S

E

-

P

-

E

-

A

-

T

-

P

-

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R
x
K

L
x
I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T

T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F
x
Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

binding 3-cyclohexyl-1-(morpholin-4-yl)propan-1-one: K129 (≠ R129), I130 (≠ L130), Y271 (≠ F271)
binding pyridoxal-5'-phosphate: S115 (= S115), C116 (≠ G116), F117 (≠ Y117), H143 (= H143), E186 (= E186), S190 (= S190), D215 (= D215), V217 (= V217), H218 (= H218), K249 (= K249), T278 (= T278), T279 (= T279)

5qraA Pandda analysis group deposition -- crystal structure of human alas2a in complex with z1101755952
54% identity, 98% coverage: 1:397/405 of query aligns to 7:399/429 of 5qraA

query
sites
5qraA

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R

W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

S

E

-

P

-

E

-

A

-

T

-

P

-

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R
x
K

L
x
I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E

H

K

Q

H

Y

G

G

A

A

M

L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T

D

V

I

I

I

E

S

G

G

T
|
T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F
x
Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

binding [(4R)-4-methyl-2,3,4,5-tetrahydro-1H-azepin-1-yl](1,3-thiazol-4-yl)methanone: K129 (≠ R129), I130 (≠ L130), Y271 (≠ F271)
binding pyridoxal-5'-phosphate: S115 (= S115), C116 (≠ G116), F117 (≠ Y117), H143 (= H143), E186 (= E186), S190 (= S190), D215 (= D215), V217 (= V217), H218 (= H218), T246 (= T246), K249 (= K249), T278 (= T278), T279 (= T279)

5qr9A Pandda analysis group deposition -- crystal structure of human alas2a in complex with z31478129
54% identity, 98% coverage: 1:397/405 of query aligns to 7:399/429 of 5qr9A

query
sites
5qr9A

M

F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R

W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

S

E

-

P

-

E

-

A

-

T

-

P

-

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

A

N

N

E

D

A

S

T

T

L

L

S

F

T

T

L

L

P

A

R

K

L

I

L

L

P

P

D

G

C

C

V

E

I

I

F

Y

S

S

D

D

A

A

L

G

N

N

H
|
H

A

A

S

S

M

M

I

I

E

Q

G

G

I

I

R

R

H

N

S

S

G

G

A

A

E

A

K

K

H

F

I

V

F

F

R

R

H

H

N

N

D

D

P

P

E

D

H

H

L

L

D

K

Q

K

L

L

A

E

R

K

Y

S

P

N

K

P

E

K

R

I

P

P

K

K

L

I

V

V

A

A

F

F

E
|
E

S

T

V

V

Y

H

S
|
S

M

M

D

D

G

G

D

A

I

I

A

C

P

P

I

L

A

E

E

E

I

L

C

C

D

D

V

V

A

S

E
x
H

K

Q

H

Y

G

G

A

A

M
x
L

T

T

Y

F

L

V

D
|
D

E

E

V
|
V

H
|
H

A

A

V

V

G

G

M

L

Y

Y

G

G

Q

S

R

R

G

G

A

A

G

G

V

I

A

G

E

E

R

R

D

D

G

G

V

I

M

M

H

H

R

K

L

I

T
x
D

V

I

I

I

E

S

G

G

T

T

L

L

G

G

K
|
K

A

A

I

F

G

G

V

C

M

V

G

G

Y

Y

I

I

T

A

G

S

S

T

S

R

A

D

L

L

V

V

D

D

C

M

V

V

R

R

S

S

F

Y

A

A

S

A

S

G

F

F

I

I

F

F

T
|
T

S

S

L

L

A

P

P

P

V

M

L

V

A

L

A

S

G

G

A

A

A

L

A

E

S

S

V

V

R

R

F

L

L

L

K

K

-

G

-

E

E

E

H

G

N

Q

E

A

L

L

R

R

E

R

R

A

H

H

Q

Q

E

R

R

N

A

V

A

K

T

H

L

M

K

R

R

Q

R

L

L

L

S

M

Q

D

A

R

G

G

L

L

P

P

V

V

L

I

P

P

S

C

V

P

S

S

H

H

I

I

V

I

P

P

V

I

L

R

V

V

G

G

D

N

A

A

R

A

L

L

C

N

K

S

Q

K

A

L

S

C

D

D

D

L

L

L

R

S

L

K

H

H

S

G

I

I

Y

Y

V

V

Q

Q

P

A

I

I

N

N

Y

Y

P

P

T

T

V

V

P

P

R

R

G

G

T

E

E

E

R

L

L

L

R

R

I

L

T

A

P

P

T

S

P

P

F

H

H

H

D

S

D

P

A

Q

K

M

M

M

D

E

H

D

F

F

V

V

D

E

A

K

L

L

D

L

V

A

W

W

S

T

binding ethyl benzylcarbamate: H206 (≠ E206), L211 (≠ M211), D241 (≠ T241)
binding pyridoxal-5'-phosphate: S115 (= S115), C116 (≠ G116), F117 (≠ Y117), H143 (= H143), E186 (= E186), S190 (= S190), D215 (= D215), V217 (= V217), H218 (= H218), K249 (= K249), T278 (= T278), T279 (= T279)

5qr3A Pandda analysis group deposition -- crystal structure of human alas2a in complex with z915492990
54% identity, 98% coverage: 1:397/405 of query aligns to 7:399/429 of 5qr3A

query
sites
5qr3A

M
x
F

D

S

Y

Y

E

D

S

Q

F

F

K

R

S

D

Q

K

I

I

D

M

G

E

L

K

K

K

R

Q

E

D

G

H

R

T

Y

Y

R

R

V

V

F

F

A

K

D

T

L

V

E

N

R

R

R

W

V

A

G

D

E

A

F

Y

P

P

V

F

A

A

S

Q

F

H

F

F

P

S

E

-

P

-

E

-

A

-

T

-

P

-

R

K

D

D

V

V

T

S

V

V

W

W

C

C

S

S

N

N

D

D

Y

Y

L

L

G

G

M

M

G

S

Q

R

H

H

P

P

V

Q

V

V

I

L

G

Q

S

A

M

T

I

Q

D

E

A

T

L

L

H

Q

K

R

C

H

G

G

A

V

G

G

A

A

G

G

T

T

R

R

N

N

I

I

S

S

G

G

T

T

N

S

H

K

Y

F

H

H

V

V

L

E

L

L

E

E

Q

Q

E

E

L

L

A

A

D

E

L

L

H

H

G

Q

K

K

E

D

S

S

A

A

L

L

F

F

T

S

S
|
S

G
x
C

Y
x
F

I

V

S

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binding 1-methyl-N-[(thiophen-2-yl)methyl]-1H-pyrazole-5-carboxamide: F7 (≠ M1)
binding pyridoxal-5'-phosphate: S115 (= S115), C116 (≠ G116), F117 (≠ Y117), H143 (= H143), E186 (= E186), S190 (= S190), D215 (= D215), V217 (= V217), H218 (= H218), K249 (= K249), T278 (= T278), T279 (= T279)

Sites not aligning to the query:

binding 1-methyl-N-[(thiophen-2-yl)methyl]-1H-pyrazole-5-carboxamide: 6

5qr1A Pandda analysis group deposition -- crystal structure of human alas2a in complex with z396380540
54% identity, 98% coverage: 1:397/405 of query aligns to 7:399/429 of 5qr1A

query
sites
5qr1A

M

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binding ~{N}-(cyclobutylmethyl)-1,5-dimethyl-pyrazole-4-carboxamide: I130 (≠ L130), Y271 (≠ F271)
binding pyridoxal-5'-phosphate: S115 (= S115), C116 (≠ G116), F117 (≠ Y117), H143 (= H143), E186 (= E186), S190 (= S190), D215 (= D215), V217 (= V217), H218 (= H218), T246 (= T246), K249 (= K249), T278 (= T278), T279 (= T279)

Query Sequence

>WP_012566209.1 NCBI__GCF_000016185.1:WP_012566209.1
MDYESFFKSQIDGLKREGRYRVFADLERRVGEFPVASFFPEPEATPRDVTVWCSNDYLGM
GQHPVVIGSMIDALHKCGAGAGGTRNISGTNHYHVLLEQELADLHGKESALLFTSGYISN
EATLSTLPRLLPDCVIFSDALNHASMIEGIRHSGAEKHIFRHNDPEHLDQLLARYPKERP
KLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGMYGQRGAGVAERDGVMHRL
TVIEGTLGKAIGVMGGYITGSSALVDCVRSFASSFIFTTSLAPVLAAGAAASVRFLKEHN
ELRERHQERAATLKRRLSQAGLPVLPSVSHIVPVLVGDARLCKQASDDLLRLHSIYVQPI
NYPTVPRGTERLRITPTPFHDDAKMDHFVDALLDVWSRLEIRRAA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory