SitesBLAST
Comparing WP_012568196.1 NCBI__GCF_000016185.1:WP_012568196.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
Q72J02 Sulfur carrier protein adenylyltransferase; E1-like protein TtuC; Sulfur carrier protein MoaD adenylyltransferase; Sulfur carrier protein ThiS adenylyltransferase; Sulfur carrier protein TtuB adenylyltransferase; tRNA two-thiouridine-synthesizing protein C; EC 2.7.7.80; EC 2.7.7.73; EC 2.7.7.- from Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) (see paper)
53% identity, 94% coverage: 7:266/276 of query aligns to 3:264/271 of Q72J02
- C192 (= C194) modified: Glycyl cysteine thioester (Cys-Gly) (interchain with G-Cter in TtuB); mutation to S: Not able to form a thioester complex with TtuB.
Sites not aligning to the query:
- 268 C→S: Still able to form a thioester complex with TtuB.
Q9VLJ8 Adenylyltransferase and sulfurtransferase MOCS3; Molybdenum cofactor synthesis protein 3; Ubiquitin activating enzyme 4; EC 2.7.7.80; EC 2.8.1.11 from Drosophila melanogaster (Fruit fly) (see paper)
43% identity, 95% coverage: 5:266/276 of query aligns to 62:321/453 of Q9VLJ8
- T62 (≠ S5) modified: Phosphothreonine
O95396 Adenylyltransferase and sulfurtransferase MOCS3; Molybdenum cofactor synthesis protein 3; Molybdopterin synthase sulfurylase; MPT synthase sulfurylase; EC 2.7.7.80; EC 2.8.1.11 from Homo sapiens (Human) (see 5 papers)
51% identity, 95% coverage: 1:263/276 of query aligns to 49:309/460 of O95396
- 158:238 (vs. 110:193, 56% identical) Interaction with NFS1
- C239 (= C194) mutation to A: Impairs sulfurtransferase activity.
Sites not aligning to the query:
- 316 modified: Disulfide link with 324; C→A: Does not affect sulfurtransferase activity.
- 324 modified: Disulfide link with 316; C→A: Does not affect sulfurtransferase activity.
- 365 C→A: Does not affect sulfurtransferase activity.
- 412 active site, Cysteine persulfide intermediate; for sulfurtransferase activity; modified: Cysteine persulfide; C→A: Abolishes sulfurtransferase activity.
- 413 K→R: Does not affect sulfurtransferase specificity and activity.
- 414 L→K: Does not affect sulfurtransferase specificity and activity.
- 415 G→A: Does not affect sulfurtransferase specificity and activity.
- 416 N→V: Does not affect sulfurtransferase specificity and activity.
- 417 D→R: Results in 470-fold increased activity.; D→T: Results in 90-fold increased activity.
- 458 P→G: Does not affect sulfurtransferase specificity and activity.
- 460 Y→A: Does not affect sulfurtransferase specificity and activity.
D4GSF3 SAMP-activating enzyme E1; Ubiquitin-like activating enzyme of archaea; Ubl-activating enzyme; EC 2.7.7.- from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
53% identity, 89% coverage: 11:255/276 of query aligns to 9:249/270 of D4GSF3
- C188 (= C194) mutation to S: Loss of activity since this mutant is not able to complement a ubaA deletion in trans to restore sampylation and tRNA thiolation.
O59954 Adenylyltransferase and sulfurtransferase uba4; Common component for nitrate reductase and xanthine dehydrogenase protein F; Ubiquitin-like protein activator 4; EC 2.7.7.80; EC 2.8.1.11 from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) (see paper)
43% identity, 91% coverage: 6:257/276 of query aligns to 60:321/482 of O59954
- G82 (= G28) mutation to D: In cnxF21ts and cnxF24ts; temperature-sensitive mutant. Impairs molybdopterin biosynthesis.
- G100 (= G46) mutation to S: In cnxF1285; impairs molybdopterin biosynthesis.
- R130 (= R76) mutation to Q: In cnxF200; impairs molybdopterin biosynthesis.
- C185 (≠ G131) mutation to Y: In cnxF472; impairs molybdopterin biosynthesis.
- E215 (≠ D161) mutation to K: In cnxF119; impairs molybdopterin biosynthesis.
- G264 (= G205) mutation to S: In cnxF142ts; temperature-sensitive mutant. Impairs molybdopterin biosynthesis.
P38820 Adenylyltransferase and sulfurtransferase UBA4; Needs CLA4 to survive protein 3; Ubiquitin-like protein activator 4; EC 2.7.7.-; EC 2.8.1.- from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 4 papers)
42% identity, 91% coverage: 6:257/276 of query aligns to 38:292/440 of P38820
- C225 (= C194) mutation C->A,S: Abolishes adenylyltransferase activity but not sulfurtransferase activity.
Sites not aligning to the query:
- 397 mutation C->A,S: Abolishes sulfurtransferase activity but not adenylyltransferase activity.
P12282 Molybdopterin-synthase adenylyltransferase; MoaD protein adenylase; Molybdopterin-converting factor subunit 1 adenylase; Sulfur carrier protein MoaD adenylyltransferase; EC 2.7.7.80 from Escherichia coli (strain K12) (see 2 papers)
43% identity, 91% coverage: 5:255/276 of query aligns to 2:248/249 of P12282
- R14 (= R17) mutation R->A,K: No effect.; mutation to A: No activity; when associated with A-73.
- C44 (≠ S47) mutation to A: No effect.
- R73 (= R76) mutation to A: No effect. No activity; when associated with A-14.; mutation to K: Substantially reduced activity.
- C128 (≠ G131) mutation to A: No effect.; mutation to Y: No activity.
- D130 (= D133) mutation to A: No activity.; mutation to E: Substantially reduced activity.
- C142 (= C145) mutation to A: No effect.
- C172 (= C177) mutation to A: No zinc bound and no enzyme activity.
- C175 (= C180) mutation to A: No zinc bound and no enzyme activity.
- C187 (= C194) mutation to A: No effect.
- C231 (≠ T238) mutation to A: No effect.
- C244 (= C251) mutation to A: No zinc bound and almost no enzyme activity.
- C247 (= C254) mutation to A: No zinc bound and almost no enzyme activity.
1jwbB Structure of the covalent acyl-adenylate form of the moeb-moad protein complex (see paper)
42% identity, 91% coverage: 5:255/276 of query aligns to 1:240/240 of 1jwbB
- active site: R13 (= R17), D129 (= D133)
- binding adenosine monophosphate: G37 (= G41), G39 (= G43), G40 (= G44), D61 (= D65), F62 (≠ H66), K85 (= K89), L108 (≠ R112), C127 (≠ G131), T128 (≠ S132), D129 (= D133), N130 (= N134), V133 (≠ T137)
- binding zinc ion: C171 (= C177), C236 (= C251), C239 (= C254)
1jw9B Structure of the native moeb-moad protein complex (see paper)
42% identity, 91% coverage: 5:255/276 of query aligns to 1:240/240 of 1jw9B
P30138 Sulfur carrier protein ThiS adenylyltransferase; EC 2.7.7.73 from Escherichia coli (strain K12) (see 3 papers)
41% identity, 92% coverage: 7:259/276 of query aligns to 1:251/251 of P30138
- C169 (= C177) binding Zn(2+)
- C172 (= C180) binding Zn(2+)
- W174 (≠ F182) mutation to A: No adenylation of ThiS.
- C184 (= C194) mutation to S: No cross-link formed with ThiS. No effect on ThiS thiocarboxylate formation in vitro. Does not support growth.
- C240 (= C251) binding Zn(2+)
- C243 (= C254) binding Zn(2+)
1zfnA Structural analysis of escherichia coli thif (see paper)
40% identity, 90% coverage: 7:255/276 of query aligns to 1:244/244 of 1zfnA
- active site: R11 (= R17), D127 (= D133)
- binding adenosine-5'-triphosphate: I34 (≠ V40), G35 (= G41), G37 (= G43), G38 (= G44), D59 (= D65), R70 (= R76), Q71 (= Q77), K83 (= K89), T126 (≠ S132), D127 (= D133), T131 (= T137)
- binding zinc ion: C169 (= C177), C172 (= C180), C240 (= C251), C243 (= C254)
1zud3 Structure of this-thif protein complex (see paper)
40% identity, 91% coverage: 7:256/276 of query aligns to 1:240/240 of 1zud3
1jwaB Structure of the atp-bound moeb-moad protein complex (see paper)
38% identity, 88% coverage: 5:247/276 of query aligns to 1:217/217 of 1jwaB
- active site: R13 (= R17), D129 (= D133)
- binding adenosine-5'-triphosphate: G39 (= G43), G40 (= G44), D61 (= D65), F62 (≠ H66), R72 (= R76), K85 (= K89), L108 (≠ R112), D129 (= D133), N130 (= N134), V133 (≠ T137)
6yubA Crystal structure of uba4 from chaetomium thermophilum (see paper)
40% identity, 78% coverage: 7:220/276 of query aligns to 6:214/423 of 6yubA
Sites not aligning to the query:
6yubB Crystal structure of uba4 from chaetomium thermophilum (see paper)
40% identity, 78% coverage: 7:220/276 of query aligns to 7:213/289 of 6yubB
Sites not aligning to the query:
O42939 Ubiquitin-activating enzyme E1-like; Pmt3-activating enzyme subunit 2 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
34% identity, 59% coverage: 34:195/276 of query aligns to 25:182/628 of O42939
Sites not aligning to the query:
- 559 modified: Phosphoserine
- 563 modified: Phosphoserine
Q7SXG4 SUMO-activating enzyme subunit 2; Ubiquitin-like 1-activating enzyme E1B; Ubiquitin-like modifier-activating enzyme 2; EC 2.3.2.- from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
32% identity, 60% coverage: 30:195/276 of query aligns to 14:175/650 of Q7SXG4
Sites not aligning to the query:
- 599 modified: Phosphoserine
3kydB Human sumo e1~sumo1-amp tetrahedral intermediate mimic (see paper)
32% identity, 62% coverage: 26:195/276 of query aligns to 1:171/477 of 3kydB
- active site: D114 (= D133), C170 (= C194), T171 (≠ S195)
- binding 5'-{[(3-aminopropyl)sulfonyl]amino}-5'-deoxyadenosine: I25 (≠ L45), D45 (= D65), L46 (≠ H66), K69 (= K89), S92 (≠ E111), I93 (≠ R112), L113 (≠ S132), D114 (= D133), N115 (= N134), C170 (= C194)
- binding zinc ion: C155 (= C177), C158 (= C180)
Sites not aligning to the query:
3kycB Human sumo e1 complex with a sumo1-amp mimic (see paper)
32% identity, 61% coverage: 27:195/276 of query aligns to 1:170/548 of 3kycB
- active site: D113 (= D133), C169 (= C194), T170 (≠ S195)
- binding 5'-deoxy-5'-(sulfamoylamino)adenosine: G22 (= G43), G23 (= G44), D44 (= D65), L45 (≠ H66), K68 (= K89), S91 (≠ E111), I92 (≠ R112), L112 (≠ S132), D113 (= D133), N114 (= N134)
- binding zinc ion: C154 (= C177), C157 (= C180)
Sites not aligning to the query:
Q9UBT2 SUMO-activating enzyme subunit 2; Anthracycline-associated resistance ARX; Ubiquitin-like 1-activating enzyme E1B; Ubiquitin-like modifier-activating enzyme 2; EC 2.3.2.- from Homo sapiens (Human) (see 8 papers)
32% identity, 62% coverage: 26:195/276 of query aligns to 4:174/640 of Q9UBT2
- G24 (= G41) to V: in ACCES; loss of function; does not rescue the abnormal phenotype in a zebrafish disease model; dbSNP:rs2075211884
- GAGGIG 24:29 (≠ GAGGLG 41:46) binding ATP
- D48 (= D65) binding ATP
- N56 (= N73) mutation to A: Abolishes ATP-dependent activation of SUMO proteins.
- NLNR 56:59 (≠ NLQR 73:76) binding ATP
- L57 (= L74) mutation to A: Strongly reduces ATP-dependent activation of SUMO proteins.
- R59 (= R76) mutation to A: Strongly reduces ATP-dependent activation of SUMO proteins.
- K72 (= K89) binding ATP; mutation to A: Abolishes ATP-dependent activation of SUMO proteins.
- SI 95:96 (≠ ER 111:112) binding ATP
- D117 (= D133) mutation to A: Abolishes ATP-dependent activation of SUMO proteins.
- DNRAAR 117:122 (≠ DNFATR 133:138) binding ATP
- R122 (= R138) to G: in ACCES; loss of function; does not rescue the abnormal phenotype in a zebrafish disease model; dbSNP:rs1599889628
- C173 (= C194) active site, Glycyl thioester intermediate; mutation to A: Loss of enzyme activity.
- T174 (≠ S195) mutation to A: Slightly reduced enzyme activity.
Sites not aligning to the query:
- 184 H→Q: No effect on enzyme activity.
- 235 I→A: Strongly reduced interaction with UBE2I; when associated with A-238.
- 238 I→A: Strongly reduced interaction with UBE2I; when associated with A-235.
- 307 L → R: in dbSNP:rs1043062
- 483 E → K: in ACCES; loss of function; does not rescue the abnormal phenotype in a zebrafish disease model; dbSNP:rs2075619600
- 484 mutation Missing: Strongly reduced interaction with UBE2I.
- 485 G→GGGG: Strongly reduced interaction with UBE2I.
Query Sequence
>WP_012568196.1 NCBI__GCF_000016185.1:WP_012568196.1
MTPASPLSDDQIERYARHIMLKEVGGRGQERLLASSVLVVGAGGLGSPLLLYLAAAGVGR
IGVIDHDSVDLSNLQRQVIHDGASVGRPKVESAAARIAALTPDVRVEAHAERLTPANVLG
LVSRYDVVADGSDNFATRFLLNDACFFAGKTLVSAAMLRFDAQLSVFKAHLGEPHPCYRC
IFREPPPPGTIPSCSEGGVLGALPGAMGSLQAIEVLKELLGIGESLSGRLLLVAALETSF
RTVRVRRDPGCPLCGGDPVYRDLSHHLPPQGQAAHG
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory