Comparing WP_012674812.1 NCBI__GCF_000021545.1:WP_012674812.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
Q9FFF4 Acetolactate synthase small subunit 2, chloroplastic; ALS-interacting protein 3; Acetohydroxy-acid synthase small subunit 2; Protein valine-tolerant 1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
46% identity, 94% coverage: 11:187/188 of query aligns to 68:240/477 of Q9FFF4
Sites not aligning to the query:
Q93YZ7 Acetolactate synthase small subunit 1, chloroplastic; ALS-interacting protein 1; Acetohydroxyacid synthase small subunit 1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
47% identity, 87% coverage: 13:175/188 of query aligns to 80:239/491 of Q93YZ7
Sites not aligning to the query:
A0QUX7 Acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
45% identity, 82% coverage: 20:174/188 of query aligns to 8:161/170 of A0QUX7
6vz8F Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
48% identity, 85% coverage: 16:175/188 of query aligns to 1:157/159 of 6vz8F
2pc6A Crystal structure of putative acetolactate synthase- small subunit from nitrosomonas europaea (see paper)
41% identity, 83% coverage: 19:174/188 of query aligns to 3:157/164 of 2pc6A
P9WKJ3 Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
44% identity, 82% coverage: 20:174/188 of query aligns to 6:159/168 of P9WKJ3
6vz8G Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
45% identity, 84% coverage: 20:176/188 of query aligns to 4:159/159 of 6vz8G
O60086 Probable acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
32% identity, 87% coverage: 19:181/188 of query aligns to 70:271/289 of O60086
Sites not aligning to the query:
6u9dL Saccharomyces cerevisiae acetohydroxyacid synthase (see paper)
30% identity, 90% coverage: 5:174/188 of query aligns to 22:240/255 of 6u9dL
6wo1B Hybrid acetohydroxyacid synthase complex structure with cryptococcus neoformans ahas catalytic subunit and saccharomyces cerevisiae ahas regulatory subunit (see paper)
32% identity, 83% coverage: 19:174/188 of query aligns to 4:195/197 of 6wo1B
5yumA Crystallographic structures of ilvn.Val/ile complexes:conformational selectivity for feedback inhibition of ahass (see paper)
30% identity, 38% coverage: 21:91/188 of query aligns to 5:74/91 of 5yumA
5yppE Crystal structure of ilvn.Val-1a (see paper)
30% identity, 38% coverage: 21:91/188 of query aligns to 5:74/91 of 5yppE
>WP_012674812.1 NCBI__GCF_000021545.1:WP_012674812.1
MSEIKVIKERPQPEKKIGRHVITVKVQHNFGVLARITGLFAGRGYNIESLTVGRTHEPHI
ARITIVVEGDERVIEQIIKQLRKLIETLRVRDITDIPHIERELALIKIHTENDRTRDEIM
RLVNIFRAKVVDVSTDTYTVEITGDEDKIEAFISLIKPFGIKEMARTGTLAMVRESATSK
ILPGERFD
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory