SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_012675618.1 NCBI__GCF_000021565.1:WP_012675618.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

P9WP33 Sulfur carrier protein CysO; 9.5 kDa culture filtrate antigen cfp10A from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
51% identity, 97% coverage: 1:91/94 of query aligns to 1:93/93 of P9WP33

query
sites
P9WP33
M
 
M
A
 
N
V
 
V
T
 
T
V
 
V
R
 
S
I
 
I
P
 
P
T
 
T
A
 
I
L
 
L
R
 
R
R
 
P
V
 
H
T
 
T
Q
 
G
G
 
G
Q
 
Q
G
 
K
E
 
S
V
 
V
Q
 
S
V
 
A
E
 
S
A
 
G
S
 
D
T
 
T
I
 
L
A
 
G
E
 
A
L
 
V
I
 
I
D
 
S
K
 
D
L
 
L
E
 
E
A
 
A
E
 
N
F
 
Y
P
 
S
G
 
G
I
 
I
K
 
S
E
 
E
R
 
R
L
 
L
V
 
M
E
 
D
P
 
P
N
 
S
-
 
S
-
 
P
G
 
G
E
 
K
I
 
L
R
 
H
K
 
R
F
 
F
V
 
V
N
 
N
F
 
I
F
 
Y
V
 
V
N
 
N
D
 
D
E
 
E
D
 
D
I
 
V
R
 
R
F
 
F
L
 
S
K
 
G
G
 
G
K
 
L
D
 
A
T
 
T
E
 
A
L
 
I
K
 
A
D
 
D
G
 
G
D
 
D
I
 
S
V
 
V
A
 
T
I
 
I
I
 
L
P
 
P
A
 
A
I
 
V
A
 
A
G
 
G
G
|
G

D4GVB0 Small archaeal modifier protein 3; SAMP3; Ubiquitin-like small archaeal modifier protein 3 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see 2 papers)
34% identity, 97% coverage: 1:91/94 of query aligns to 1:92/92 of D4GVB0

query
sites
D4GVB0
M
 
M
A
 
E
V
 
L
T
 
E
V
 
L
R
 
R
I
 
F
P
 
F
T
 
A
A
 
T
L
 
F
R
 
R
R
 
E
V
 
V
T
 
V
Q
 
-
G
 
G
Q
 
Q
G
 
K
E
 
S
V
 
I
Q
 
Y
V
 
W
-
 
R
-
 
V
-
 
D
E
 
D
A
 
D
S
 
A
T
 
T
I
 
V
A
 
G
E
 
D
L
 
V
I
 
L
D
 
R
K
 
S
L
 
L
E
 
E
A
 
A
E
 
E
F
 
Y
P
 
D
G
 
G
I
 
L
K
 
A
E
 
G
R
 
R
L
 
L
V
 
I
E
 
E
P
 
-
N
 
D
G
 
G
E
 
E
I
 
V
R
 
K
K
 
P
F
 
H
V
 
V
N
 
N
F
 
V
F
 
L
V
 
K
N
 
N
D
 
G
E
 
R
D
 
E
I
 
V
R
 
V
F
 
H
L
 
L
K
 
D
G
 
G
K
 
M
D
 
A
T
 
T
E
 
A
L
 
L
K
 
D
D
 
D
G
 
G
D
 
D
I
 
A
V
 
V
A
 
S
I
 
V
I
 
F
P
 
P
A
 
P
I
 
V
A
 
A
G
|
G
G
|
G

Query Sequence

>WP_012675618.1 NCBI__GCF_000021565.1:WP_012675618.1
MAVTVRIPTALRRVTQGQGEVQVEASTIAELIDKLEAEFPGIKERLVEPNGEIRKFVNFF
VNDEDIRFLKGKDTELKDGDIVAIIPAIAGGLEA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory