Comparing WP_012709239.1 NCBI__GCF_000018545.1:WP_012709239.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
39% identity, 94% coverage: 18:380/387 of query aligns to 14:371/380 of P54955
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
38% identity, 94% coverage: 11:375/387 of query aligns to 41:413/440 of O04373
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
38% identity, 93% coverage: 13:373/387 of query aligns to 47:415/442 of P54968
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
36% identity, 92% coverage: 11:367/387 of query aligns to 13:370/389 of 4ewtA
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
33% identity, 87% coverage: 3:339/387 of query aligns to 8:344/398 of 6slfA
Sites not aligning to the query:
>WP_012709239.1 NCBI__GCF_000018545.1:WP_012709239.1
MPILNRAAELQNEVTEWRRHLHMNPELLFAVENTAAFVEKKLREFGVDEIVTGLGRTGVV
GLIRGNLGAGRTIGLRADMDALPITETSGKAWSSTTPGKMHACGHDGHTAMLLGAAKYLA
ETRNFSGNVAVIFQPAEEGGGGGNEMVKDGMMERFAIEEVYGMHNMPGMPVGHFGSRVGP
IMASTDEFTITVKGRGGHAAQPHKTIDPIAIGAQIVNALQTIASRTVDPLASIVVSVTKF
NAGFAHNVIPEQAVLAGTVRALTPQVRDTGEARIRQIAESIAGAYGATVDVWYGRNYPVT
VNHATETGHALAVAATVAGEGNVNAALDPMMGGEDFSYMLLARPGAFVFIGNGESAGLHH
PAYDFNDDVIPHGISYWVKLTETRLAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory