Comparing WP_012755619.1 NCBI__GCF_000023185.1:WP_012755619.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4pz0A The crystal structure of a solute binding protein from bacillus anthracis str. Ames in complex with quorum-sensing signal autoinducer-2 (ai-2)
27% identity, 86% coverage: 25:306/327 of query aligns to 6:290/321 of 4pz0A
1tjyA Crystal structure of salmonella typhimurium ai-2 receptor lsrb in complex with r-thmf (see paper)
27% identity, 90% coverage: 26:320/327 of query aligns to 3:312/316 of 1tjyA
4wzzA Crystal structure of an abc transporter solute binding protein (ipr025997) from clostridium phytofermentas (cphy_0583, target efi- 511148) with bound l-rhamnose
26% identity, 78% coverage: 31:284/327 of query aligns to 9:266/321 of 4wzzA
2ioyA Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
28% identity, 79% coverage: 29:287/327 of query aligns to 3:257/274 of 2ioyA
5hqjA Crystal structure of abc transporter solute binding protein b1g1h7 from burkholderia graminis c4d1m, target efi-511179, in complex with d-arabinose
31% identity, 83% coverage: 29:299/327 of query aligns to 9:279/289 of 5hqjA
3c6qC Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
27% identity, 73% coverage: 39:277/327 of query aligns to 13:248/305 of 3c6qC
Sites not aligning to the query:
3t95A Crystal structure of lsrb from yersinia pestis complexed with autoinducer-2 (see paper)
25% identity, 84% coverage: 26:300/327 of query aligns to 1:277/314 of 3t95A
2h3hA Crystal structure of the liganded form of thermotoga maritima glucose binding protein (see paper)
27% identity, 73% coverage: 39:277/327 of query aligns to 13:248/313 of 2h3hA
Sites not aligning to the query:
5dteB Crystal structure of an abc transporter periplasmic solute binding protein (ipr025997) from actinobacillus succinogenes 130z(asuc_0081, target efi-511065) with bound d-allose
26% identity, 80% coverage: 25:287/327 of query aligns to 1:268/287 of 5dteB
3ejwA Crystal structure of the sinorhizobium meliloti ai-2 receptor, smlsrb (see paper)
28% identity, 85% coverage: 28:306/327 of query aligns to 3:284/315 of 3ejwA
4ry9B Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
27% identity, 84% coverage: 26:301/327 of query aligns to 2:279/297 of 4ry9B
4ry9A Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
27% identity, 84% coverage: 26:301/327 of query aligns to 2:279/297 of 4ry9A
6dspA Lsrb from clostridium saccharobutylicum in complex with ai-2 (see paper)
24% identity, 85% coverage: 29:307/327 of query aligns to 3:294/326 of 6dspA
4wutA Crystal structure of an abc transporter solute binding protein (ipr025997) from agrobacterium vitis (avi_5133, target efi-511220) with bound d-fucose
29% identity, 80% coverage: 28:289/327 of query aligns to 2:266/290 of 4wutA
1dbpA Identical mutations at corresponding positions in two homologous proteins with non-identical effects (see paper)
24% identity, 80% coverage: 29:288/327 of query aligns to 4:258/271 of 1dbpA
4zjpA Structure of an abc-transporter solute binding protein (sbp_ipr025997) from actinobacillus succinogenes (asuc_0197, target efi-511067) with bound beta-d-ribopyranose
24% identity, 76% coverage: 39:287/327 of query aligns to 15:257/270 of 4zjpA
Sites not aligning to the query:
4rs3A Crystal structure of carbohydrate transporter a0qyb3 from mycobacterium smegmatis str. Mc2 155, target efi-510969, in complex with xylitol (see paper)
27% identity, 68% coverage: 68:288/327 of query aligns to 41:259/315 of 4rs3A