Comparing WP_012758972.1 NCBI__GCF_000023185.1:WP_012758972.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
8qevA Crystal structure of ornithine transcarbamylase from arabidopsis thaliana (atotc) in complex with carbamoyl phosphate (see paper)
28% identity, 97% coverage: 6:284/289 of query aligns to 2:291/297 of 8qevA
8qeuA Crystal structure of ornithine transcarbamylase from arabidopsis thaliana (atotc) in complex with ornithine (see paper)
27% identity, 97% coverage: 6:284/289 of query aligns to 2:298/304 of 8qeuA
Q51742 Ornithine carbamoyltransferase, anabolic; OTCase; EC 2.1.3.3 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see 3 papers)
26% identity, 98% coverage: 6:287/289 of query aligns to 8:309/315 of Q51742
Sites not aligning to the query:
7np0A Crystal structure of mycobacterium tuberculosis argf in complex with (4-nitrophenyl)boronic acid.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:301/305 of 7np0A
7nnzB Crystal structure of mycobacterium tuberculosis argf in complex with 5-methyl-4-phenylthiazol-2-amine.
31% identity, 98% coverage: 6:287/289 of query aligns to 3:293/297 of 7nnzB
P9WIT9 Ornithine carbamoyltransferase; OTCase; EC 2.1.3.3 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
30% identity, 98% coverage: 4:287/289 of query aligns to 1:303/307 of P9WIT9
7novA Crystal structure of mycobacterium tuberculosis argf in complex with (4-methyl-3-nitrophenyl)boronic acid.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:298/302 of 7novA
2i6uA Crystal structure of ornithine carbamoyltransferase complexed with carbamoyl phosphate and l-norvaline from mycobacterium tuberculosis (rv1656) at 2.2 a (see paper)
30% identity, 98% coverage: 6:287/289 of query aligns to 3:303/307 of 2i6uA
7nouA Crystal structure of mycobacterium tuberculosis argf in complex with (3,5-dichlorophenyl)boronic acid.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:304/308 of 7nouA
7nosA Crystal structure of mycobacterium tuberculosis argf in complex with 4-bromo-6-(trifluoromethyl)-1h-benzo[d]imidazole.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:304/308 of 7nosA
7norA Crystal structure of mycobacterium tuberculosis argf in complex with 2-fluoro-4-hydroxybenzonitrile.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:304/308 of 7norA
7nnyA Crystal structure of mycobacterium tuberculosis argf in complex with naphthalen-1-ol.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:304/308 of 7nnyA
7nnwA Crystal structure of mycobacterium tuberculosis argf in complex with methyl 4-hydroxy-3-iodobenzoate.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:304/308 of 7nnwA
7nnvA Crystal structure of mycobacterium tuberculosis argf in complex with carbamoyl phosphate.
30% identity, 98% coverage: 6:287/289 of query aligns to 4:304/308 of 7nnvA
4nf2A Crystal structure of anabolic ornithine carbamoyltransferase from bacillus anthracis in complex with carbamoyl phosphate and l- norvaline
25% identity, 97% coverage: 5:284/289 of query aligns to 7:301/307 of 4nf2A
Q81M99 Ornithine carbamoyltransferase; OTCase; EC 2.1.3.3 from Bacillus anthracis
25% identity, 97% coverage: 5:284/289 of query aligns to 11:305/316 of Q81M99
Q837U7 Putrescine carbamoyltransferase; PTC; PTCase; Agmatine catabolism protein B; Putrescine transcarbamoylase; Putrescine transcarbamylase; EC 2.1.3.6 from Enterococcus faecalis (strain ATCC 700802 / V583) (see paper)
22% identity, 90% coverage: 4:262/289 of query aligns to 1:283/339 of Q837U7
4a8hA Crystal structure of putrescine transcarbamylase from enterococcus faecalis with n-(phosphonoacetyl)-putrescine (see paper)
22% identity, 90% coverage: 4:262/289 of query aligns to 1:283/340 of 4a8hA
Sites not aligning to the query:
4am8A Crystal structure of the r54g mutant of putrescine transcarbamylase from enterococcus faecalis bound to a curing guanidinium ion
22% identity, 90% coverage: 4:262/289 of query aligns to 1:283/336 of 4am8A
Sites not aligning to the query:
4am8D Crystal structure of the r54g mutant of putrescine transcarbamylase from enterococcus faecalis bound to a curing guanidinium ion
22% identity, 90% coverage: 4:262/289 of query aligns to 1:283/349 of 4am8D
Sites not aligning to the query:
>WP_012758972.1 NCBI__GCF_000023185.1:WP_012758972.1
MTDLARNFLEFHDIPEAGLRSIIGRAGELAKAWDERTMPQSLAGKRVALIVDDGGWRNTT
AFDLGIQAMGGICVHVPIGFNAREETGDLSGYLGNWFDMLVIRTKEFATLKAVAAASPVP
VINARTRSNHPCETLGDLAYINSRRGLIDGLKVVGVAADANILRSWAEASIALPIEVVQV
YPEHWHISDAALLNGRFRVSTDMGELSNADVVTTDSWPGDAASDALAGYRIGADVLDRLR
EDAIFLPCPPVRRGQEVTAEAMAHPLCQSRVAKAFLLHAQNALMEWVAT
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory