Comparing WP_012851086.1 NCBI__GCF_000024385.1:WP_012851086.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
Q9Y041 Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Caenorhabditis elegans (see paper)
25% identity, 94% coverage: 24:397/397 of query aligns to 41:430/437 of Q9Y041
Q93099 Homogentisate 1,2-dioxygenase; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Homo sapiens (Human) (see 13 papers)
26% identity, 94% coverage: 24:397/397 of query aligns to 38:431/445 of Q93099
4aq6D Substrate bound homogentisate 1,2-dioxygenase (see paper)
25% identity, 94% coverage: 24:396/397 of query aligns to 35:418/427 of 4aq6D
Q88E47 Homogentisate 1,2-dioxygenase; HGDO; Homogentisate oxygenase; Homogentisic acid oxidase; Homogentisicase; EC 1.13.11.5 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
25% identity, 94% coverage: 24:396/397 of query aligns to 41:424/433 of Q88E47
3zdsF Structure of homogentisate 1,2-dioxygenase in complex with reaction intermediates of homogentisate with oxygen. (see paper)
25% identity, 94% coverage: 24:396/397 of query aligns to 34:417/426 of 3zdsF
3zdsC Structure of homogentisate 1,2-dioxygenase in complex with reaction intermediates of homogentisate with oxygen. (see paper)
25% identity, 94% coverage: 24:396/397 of query aligns to 34:417/426 of 3zdsC
3zdsA Structure of homogentisate 1,2-dioxygenase in complex with reaction intermediates of homogentisate with oxygen. (see paper)
25% identity, 94% coverage: 24:396/397 of query aligns to 33:416/425 of 3zdsA
>WP_012851086.1 NCBI__GCF_000024385.1:WP_012851086.1
MPYYRVVGEIPRKRHVQFRRPDGGLYAEELMGEEGFSSHSSLLYHRHAPTAILKSEEMPE
GAGEGPLEPNHPLRPRAYRTQDLPVGGDLLLGRQLLAGNEDVRISFAAVDPASGPGELYR
NSVGDEVVYVQTGAARLESTYGALEVTSGDYVVIPTGTIHRWVPTGEETLRALVIEARGH
VRPPRRYLSQYGQFLEHAPYSERDLRAPTEPLLADGEEVPVIVRTRAGLSRLTYLHHPFD
VVGWDGYLYPYAFNIADFEPVVKSIHAPPPVHQTFEGPNFVICSFCPRPLDFHEQAVPIP
YNHHNVDSDELMFYVGGDYSARRGTGIGIGSISLHPAGFTHGPAPGAVEAVIEAMRAGHT
ATSETAVMVDTFRPLLLGPAAARCEDPEYAWSWARLS
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory