Comparing WP_012853222.1 NCBI__GCF_000024385.1:WP_012853222.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
1ox5A Towards understanding the mechanism of the complex cyclization reaction catalyzed by imidazole glycerophosphate synthase (see paper)
36% identity, 98% coverage: 3:208/210 of query aligns to 5:213/532 of 1ox5A
Sites not aligning to the query:
P33734 Imidazole glycerol phosphate synthase hisHF; IGP synthase; IGPS; ImGP synthase; EC 4.3.2.10; EC 3.5.1.2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
36% identity, 98% coverage: 3:208/210 of query aligns to 2:210/552 of P33734
Sites not aligning to the query:
1ox4B Towards understanding the mechanism of the complex cyclization reaction catalyzed by imidazole glycerophosphate synthase (see paper)
36% identity, 98% coverage: 3:208/210 of query aligns to 5:213/538 of 1ox4B
Sites not aligning to the query:
7ac8B Molecular basis for the unique allosteric activation mechanism of the heterodimeric imidazole glycerol phosphate synthase complex. (see paper)
32% identity, 96% coverage: 7:208/210 of query aligns to 7:197/202 of 7ac8B
2ywcA Crystal structure of gmp synthetase from thermus thermophilus in complex with xmp
34% identity, 66% coverage: 70:208/210 of query aligns to 66:182/475 of 2ywcA
Sites not aligning to the query:
>WP_012853222.1 NCBI__GCF_000024385.1:WP_012853222.1
MKPSVVVLDYGSGNLRSAERAVARAGAQVTVTSDYETALEADGLVVPGVGAFAACMQGLN
AIRGRQLIGRRLAGGRPVLGICVGMQILFEKGVEHGVTTEGCAEWPGTVERLHAPVLPHM
GWNTVRAPEGSVLFRGLDADTRFYFVHSYAVRRWEMPAGSRLTPPLVTWAEHGEPFVAAV
ENGALCATQFHPEKSGDAGAQLLRNWLSTL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory