Comparing WP_012968330.1 NCBI__GCF_000025465.1:WP_012968330.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2xuaH Crystal structure of the enol-lactonase from burkholderia xenovorans lb400 (see paper)
47% identity, 97% coverage: 2:248/255 of query aligns to 10:259/261 of 2xuaH
4uhdA Structural studies of a thermophilic esterase from thermogutta terrifontis (acetate bound) (see paper)
29% identity, 93% coverage: 12:249/255 of query aligns to 25:268/274 of 4uhdA
4uhfA Structural studies of a thermophilic esterase from thermogutta terrifontis (l37a mutant with butyrate bound) (see paper)
29% identity, 93% coverage: 12:249/255 of query aligns to 25:268/278 of 4uhfA
4uheA Structural studies of a thermophilic esterase from thermogutta terrifontis (malate bound) (see paper)
29% identity, 93% coverage: 12:249/255 of query aligns to 25:268/272 of 4uheA
5cbkA Crystal structure of the strigolactone receptor shhtl5 from striga hermonthica (see paper)
23% identity, 92% coverage: 12:245/255 of query aligns to 16:261/271 of 5cbkA
Sites not aligning to the query:
6eb3B Structural and enzymatic characterization of an esterase from a metagenomic library
27% identity, 97% coverage: 1:248/255 of query aligns to 9:263/268 of 6eb3B
8dvcA Receptor shhtl5 from striga hermonthica in complex with strigolactone agonist gr24 (see paper)
23% identity, 92% coverage: 12:245/255 of query aligns to 14:259/268 of 8dvcA
6eb3C Structural and enzymatic characterization of an esterase from a metagenomic library
26% identity, 97% coverage: 1:248/255 of query aligns to 9:257/262 of 6eb3C
6eb3A Structural and enzymatic characterization of an esterase from a metagenomic library
26% identity, 97% coverage: 1:248/255 of query aligns to 9:260/265 of 6eb3A
5z7xA Crystal structure of striga hermonthica htl4 (shhtl4) (see paper)
22% identity, 89% coverage: 12:238/255 of query aligns to 17:255/270 of 5z7xA
5dnuA Crystal structure of striga kai2-like protein in complex with karrikin (see paper)
23% identity, 94% coverage: 12:251/255 of query aligns to 14:265/267 of 5dnuA
7c8lA Hybrid designing of potent inhibitors of striga strigolactone receptor shhtl7 (see paper)
21% identity, 89% coverage: 12:238/255 of query aligns to 14:252/268 of 7c8lA
5z7yA Crystal structure of striga hermonthica htl7 (shhtl7) (see paper)
21% identity, 89% coverage: 12:238/255 of query aligns to 15:253/267 of 5z7yA
7snuA Crystal structure of shhtl7 from striga hermonthica in complex with strigolactone antagonist rg6 (see paper)
21% identity, 89% coverage: 12:238/255 of query aligns to 17:255/270 of 7snuA
5z89A Structural basis for specific inhibition of highly sensitive shhtl7 receptor (see paper)
21% identity, 89% coverage: 12:238/255 of query aligns to 14:252/268 of 5z89A
6ap8A Crystal structure of rice d14 bound to 2-(2-methyl-3-nitroanilino) benzoic acid (see paper)
22% identity, 92% coverage: 11:244/255 of query aligns to 15:259/266 of 6ap8A
5dj5A Crystal structure of rice dwarf14 in complex with synthetic strigolactone gr24 (see paper)
22% identity, 92% coverage: 11:244/255 of query aligns to 15:259/266 of 5dj5A
4ihaA Crystal structure of rice dwarf14 (d14) in complex with a gr24 hydrolysis intermediate (see paper)
22% identity, 92% coverage: 11:244/255 of query aligns to 17:261/268 of 4ihaA
6brtA F-box protein cth with hydrolase (see paper)
22% identity, 92% coverage: 11:244/255 of query aligns to 34:278/285 of 6brtA
5zhtA Crystal structure of osd14 in complex with covalently bound kk073 (see paper)
22% identity, 92% coverage: 11:244/255 of query aligns to 14:258/265 of 5zhtA
>WP_012968330.1 NCBI__GCF_000025465.1:WP_012968330.1
MNLDYQLDGPEGAPVIVLSNSLGTTRAMWQPQIEALTAHFRVLRYDTHGHGNTTKNGKVT
LAQLGEDVIALLDHLNIDRAWFCGISMGGLTGLWLGRFAPERFYGLAVANTAARIGDQAS
WLSRARAVRQEGMAVVAAGAADRWFTHAFRQKAPEVVEALCHQLTHTDVEGYAACCEALA
AADLRGEVGQIPLPTLIIAGESDPVTTVSDASFLQQQIPASQVVVLAASHLSNIEAPKSF
TSALLSFFQGERHGG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory