SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_012972225.1 NCBI__GCF_000025485.1:WP_012972225.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

U3KRF2 3-dehydroquinate synthase, chloroplastic; EC 4.2.3.4 from Actinidia chinensis var. chinensis (Chinese soft-hair kiwi) (see paper)
57% identity, 99% coverage: 4:354/355 of query aligns to 84:439/445 of U3KRF2

query
sites
U3KRF2

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N122 (= N42) binding NAD(+)
DGE 153:155 (= DGE 69:71) binding NAD(+)
K158 (= K74) binding NAD(+)
GGVIGD 186:191 (= GGVIGD 102:107) binding NAD(+)
TT 211:212 (= TT 127:128) binding NAD(+)
K224 (= K140) binding NAD(+)
K233 (= K149) binding NAD(+)
TLNT 251:254 (≠ TLVT 167:170) binding NAD(+)
K308 (= K224) binding NAD(+)

3zokA Structure of 3-dehydroquinate synthase from actinidia chinensis in complex with NAD (see paper)
57% identity, 99% coverage: 4:354/355 of query aligns to 4:359/365 of 3zokA

query
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3zokA

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active site: R122 (= R118), K144 (= K140), E186 (= E182), K228 (= K224), E238 (= E234), R242 (= R238), N246 (= N242), H249 (= H245), H253 (= H249), H266 (= H262)
binding glycine: K144 (= K140), K228 (= K224), R242 (= R238)
binding nicotinamide-adenine-dinucleotide: T44 (= T44), V45 (= V45), D73 (= D69), E75 (= E71), K78 (= K74), G106 (= G102), G107 (= G103), V108 (= V104), D111 (= D107), T131 (= T127), T132 (= T128), M134 (≠ L130), D138 (= D134), S139 (= S135), K144 (= K140), K153 (= K149), T174 (= T170), L175 (= L171), E179 (= E175), H266 (= H262)

5eksA Structure of 3-dehydroquinate synthase from acinetobacter baumannii in complex with NAD
60% identity, 97% coverage: 1:346/355 of query aligns to 2:341/355 of 5eksA

query
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5eksA

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active site: R120 (= R118), K142 (= K140), E184 (= E182), K226 (= K224), R237 (= R238), N241 (= N242), H244 (= H245), H248 (= H249), H261 (= H262)
binding magnesium ion: E184 (= E182), H244 (= H245), H261 (= H262)
binding nicotinamide-adenine-dinucleotide: N42 (= N42), V45 (= V45), D71 (= D69), E73 (= E71), K76 (= K74), G104 (= G102), G105 (= G103), V106 (= V104), D109 (= D107), T129 (= T127), T130 (= T128), D136 (= D134), S137 (= S135), K142 (= K140), T172 (= T170), L173 (= L171), E177 (= E175)

Q9KNV2 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
57% identity, 96% coverage: 1:341/355 of query aligns to 1:342/361 of Q9KNV2

query
sites
Q9KNV2

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C

V

T

V

L

V

I

I

A

A

L

L

G

G

G

G

G
|
G

V
|
V

I
|
I

G
|
G

D
|
D

M

L

T

V

G

G

F

F

A

A

A

A

A

A

C

C

Y

Y

Q

Q

R

R

G

G

V

V

D

D

F

F

I

I

Q

Q

V

I

P

P

T
|
T

T
|
T

L

L

L

L

A

S

Q

Q

V

V

D

D

S

S

S

S

V

V

G

G

G

G

K
|
K

T

T

G

A

L

V

N

N

H

H

P

P

A

L

G

G

K
|
K

N
|
N

M

M

I

I

G

G

A

A

F

F

H

Y

Q

Q

P

P

R

K

A

A

V

V

I

V

A

I

D

D

T

T

D

D

T
x
C

L
|
L

V
x
T

T
|
T

L

L

P

P

Q

A

R

R

E

E

L

F

S

A

A

A

G

G

M

M

A

A

E

E

V

V

L

I

K

K

Y

Y

G

G

F

I

I

I

R

Y

D

D

A

S

A

A

F

F

L

F

D

D

W

W

L

L

E

E

C

A

H

Q

M

M

T

E

E

A

L

L

M

Y

S

A

R

L

D

D

P

E

E

Q

A

A

L

L

A

T

H

Y

A

A

I

I

W

A

R

R

S

C

C

C

E

Q

V

I

K

K

A

A

Q

E

I

V

V

V

A

A

E

Q

D

D

E

E

F

K

E

E

S

S

G

G

S

I

R

R

A

A

L

L

L

L

N

N

L

L

G

G

H

H

T

T

F

F

G

G

H

H

A

A

I

I

E

E

A

A

G

H

V

M

G

G

Y

Y

G

G

E

N

W

W

L

L

H

H

G

G

E

E

A

A

V

V

G

S

A

A

G

G

I

T

C

V

L

M

A

A

A

A

V

K

L

T

S

A

A

Q

R

L

L

Q

G

G

W

L

L

I

T

D

E

A

A

S

E

Q

L

F

K

E

R

R

T

I

R

L

R

A

L

I

I

L

A

K

G

K

A

A

G

H

L

L

P

P

T

V

G

R

R

T

P

P

A

E

E

N

L

M

S

T

P

F

E

A

R

D

M

F

L

M

E

Q

L

H

M

M

A

M

V

R

D

D

K

K

K

K

V

V

L

L

A

A

G

G

Q

E

L

L

R

R

L

L

V

V

L

L

L

P

R

T

Q

S

L

I

G

G

E

T

A

S

V

A

V

V

N41 (= N42) binding NAD(+)
DGEQYK 70:75 (≠ DGEVYK 69:74) binding NAD(+)
GVIGD 104:108 (= GVIGD 103:107) binding NAD(+)
TT 128:129 (= TT 127:128) binding NAD(+)
K141 (= K140) binding NAD(+)
KN 150:151 (= KN 149:150) binding NAD(+)
CLTT 168:171 (≠ TLVT 167:170) binding NAD(+)

3okfA 2.5 angstrom resolution crystal structure of 3-dehydroquinate synthase (arob) from vibrio cholerae
56% identity, 96% coverage: 1:341/355 of query aligns to 2:341/360 of 3okfA

query
sites
3okfA

M

M

R

E

T

R

L

I

N

T

V

V

D

N

L

L

G

G

A

E

R

R

S

S

Y

Y

P

P

I

I

H

S

I

I

G

G

S

A

G

G

L

L

L

F

A

A

D

N

G

-

D

-

L

-

Y

-

R

-

P

P

H

A

L

L

R

L

S

S

L

L

-

S

-

A

-

K

-

Q

Q

K

V

V

M

V

I

I

V

V

T

T

N
|
N

E

H

T

T

V

V

A

A

P

P

L
|
L

Y

Y

L

A

E

P

P

A

V

I

R

I

Q

S

A

L

L

L

D

D

-

H

-

I

G

G

L

C

Q

Q

V

H

R

A

E

L

V

L

I

E

L

L

P

P

D
|
D

G

G

E
|
E

V

Q

Y

Y

K
|
K

T

T

L

L

E

E

V

T

W

F

N

N

R

T

I

V

F

M

D

S

A

F

L

L

L

L

A

E

E

H

R

N

F

Y

A

S

R

R

D

D

C

V

T

V

L

V

I

I

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

L

T

V

G

G

F

F

A

A

A

A

A

A

C

C

Y

Y

Q

Q

R
|
R

G

G

V

V

D

D

F

F

I

I

Q

Q

V

I

P

P

T
|
T

T
|
T

L

L

L
|
L

A

S

Q

Q

V

V

D
|
D

S

S

S

S

V

V

G

G

G

G

K
|
K

T

T

G

A

L

V

N

N

H

H

P

P

A

L

G

G

K

K

N

N

M

M

I

I

G

G

A

A

F

F

H

Y

Q

Q

P

P

R

K

A

A

V

V

I

V

A

I

D

D

T

T

D

D

T

C

L

L

V

T

T
|
T

L
|
L

P

P

Q

A

R

R

E
|
E

L

F

S

A

A

A

G

G

M

M

A

A

E
|
E

V

V

L

I

K

K

Y

Y

G

G

F

I

I

I

R

Y

D

D

A

S

A

A

F

F

L

F

D

D

W

W

L

L

E

E

C

A

H

Q

M

M

T

E

E

A

L

L

M

Y

S

A

R

L

D

D

P

E

E

Q

A

A

L

L

A

T

H

Y

A

A

I

I

W

A

R

R

S

C

C

C

E

Q

V

I

K
|
K

A

A

Q

E

I

V

V

V

A

A

E

Q

D

D

E

-

F

-

E

E

S

K

G

G

S

I

R
|
R

A

A

L

L

L

L

N
|
N

L

L

G

G

H
|
H

T

T

F

F

G

G

H
|
H

A

A

I

I

E

E

A

A

G

H

V

M

G

G

Y

Y

G

G

E

N

W

W

L

L

H
|
H

G

G

E

E

A

A

V

V

G

S

A

A

G

G

I

T

C

V

L

M

A

A

A

A

V

K

L

T

S

A

A

Q

R

L

L

Q

G

G

W

L

L

I

T

D

E

A

A

S

E

Q

L

F

K

E

R

R

T

I

R

L

R

A

L

I

I

L

A

K

G

K

A

A

G

H

L

L

P

P

T

V

G

R

R

T

P

P

A

E

E

N

L

M

S

T

P

F

E

A

R

D

M

F

L

M

E

Q

L

H

M

M

A

M

V

R

D

D

K

K

K

K

V

V

L

L

A

A

G

G

Q

E

L

L

R

R

L

L

V

V

L

L

L

P

R

T

Q

S

L

I

G

G

E

T

A

S

V

A

V

V

active site: R120 (= R118), K142 (= K140), E184 (= E182), K226 (= K224), R238 (= R238), N242 (= N242), H245 (= H245), H249 (= H249), H262 (= H262)
binding nicotinamide-adenine-dinucleotide: N42 (= N42), L48 (= L48), D71 (= D69), E73 (= E71), K76 (= K74), G104 (= G102), G105 (= G103), V106 (= V104), D109 (= D107), T129 (= T127), T130 (= T128), L132 (= L130), D136 (= D134), T172 (= T170), L173 (= L171), E177 (= E175)

6llaB Crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+ and NAD (see paper)
56% identity, 97% coverage: 1:346/355 of query aligns to 2:350/363 of 6llaB

query
sites
6llaB

M

M

R

E

T

K

L

V

N

T

V

V

D

T

L

L

G

D

A

E

R

R

S

S

Y

Y

P

P

I

I

H

N

I

I

G

A

S

P

G

S

L

L

L

Y

A

Q

D

Q

G

Q

D

D

L

A

Y

F

R

W

P

P

H

L

L

T

R

A

S

G

L

Q

Q

R

V

A

M

M

I

I

V

V

T

T

N

N

E

E

T

T

V
x
L

A

A

P

P

L

L

Y

Y

L

L

E

H

P

K

V

I

R

Q

Q

T

A

V

L

L

D

E

-

V

-

S

G

G

L

V

Q

K

V

V

R

D

E

S

V

I

I

I

L

L

P

P

D
|
D

G

G

E
|
E

V

Q

Y

Y

K
|
K

T

S

L

L

E

F

V

I

W

M

N

N

R

D

I

V

F

F

D

T

A

A

L

L

L

L

A

E

E

K

R

H

F

H

A

N

R

R

D

D

C

T

T

T

L

L

I

I

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

L

T

T

G

G

F

F

A

A

A

A

A

A

C

S

Y

Y

Q

Q

R
|
R

G

G

V

V

D

R

F

F

I

I

Q

Q

V

V

P

P

T
|
T

T
|
T

L

L

L
|
L

A

S

Q

Q

V

V

D
|
D

S

S

S

S

V

V

G

G

G

G

K
|
K

T

T

G

A

L

V

N

N

H

H

P

P

A

L

G

G

K

K

N

N

M

M

I

I

G

G

A

A

F

F

H

Y

Q

Q

P

P

R

A

A

S

V

V

I

V

A

I

D

D

T

L

D

D

T

C

L

L

V

K

T
|
T

L
|
L

P

P

Q

K

R

R

E
|
E

L

L

S

S

A

S

G

G

M

L

A

A

E
|
E

V

V

L

I

K

K

Y

Y

G

G

F

I

I

I

R

L

D

D

A

G

A

E

F

F

L

F

D

S

W

W

L

L

E

E

C

E

H

N

M

I

T

D

E

A

L

L

M

M

S

A

R

L

D

D

P

N

E

Q

A

A

L

M

A

A

H

Y

A

C

I

I

W

R

R

R

S

C

C

C

E

E

V

L

K
|
K

A

A

Q

Q

I

V

V

V

A

A

E

A

D

D

E

E

F

K

E
|
E

-

T

S

S

G

G

S

L

R
|
R

A

A

L

L

L

L

N
|
N

L

L

G

G

H
|
H

T

T

F

F

G

G

H
|
H

A

A

I

I

E

E

A

A

G

E

V

M

G

G

Y

Y

G

G

E

V

W

W

L

L

H
|
H

G

G

E

E

A

A

V

V

G

A

A

A

G

G

I

M

C

V

L

M

A

A

A

A

V

K

L

T

S

A

A

E

R

L

L

I

G

G

W

Q

L

F

T

T

E

P

A

E

E

Q

L

T

K

D

R

R

T

V

R

I

R

A

L

L

I

L

A

K

G

R

A

A

G

E

L

L

P

P

T

V

G

T

R

G

P

P

A

A

E

K

L

M

S

Q

P

P

E

D

R

D

M

Y

L

L

E

P

L

H

M

M

A

M

V

R

D

D

K

K

K

K

V

V

L

M

A

G

G

G

Q

K

L

L

R

H

L

L

V

I

L

L

L

P

R

T

Q

T

L

I

G

G

E

H

A

S

V

E

V

M

T

R

S

S

E

D

F

V

D

D

active site: R121 (= R118), K143 (= K140), E185 (= E182), K227 (= K224), E237 (= E234), R242 (= R238), N246 (= N242), H249 (= H245), H253 (= H249), H266 (= H262)
binding magnesium ion: E185 (= E182), H249 (= H245), H266 (= H262)
binding nicotinamide-adenine-dinucleotide: L46 (≠ V45), D72 (= D69), E74 (= E71), K77 (= K74), G105 (= G102), G106 (= G103), V107 (= V104), D110 (= D107), T130 (= T127), T131 (= T128), L133 (= L130), D137 (= D134), K143 (= K140), T173 (= T170), L174 (= L171), E178 (= E175)

6lk2A Crystal structure of providencia alcalifaciens 3-dehydroquinate synthase (dhqs) in complex with mg2+, NAD and chlorogenic acid (see paper)
55% identity, 97% coverage: 1:346/355 of query aligns to 2:346/357 of 6lk2A

query
sites
6lk2A

M

M

R

E

T

K

L

V

N

T

V

V

D

T

L

L

G

D

A

E

R

R

S

S

Y

Y

P

P

I

I

H

N

I

I

G

A

S

P

G

S

L

L

L

Y

A

Q

D

Q

G

Q

D

D

L

A

Y

F

R

W

P

P

H

L

L

T

R

A

S

G

L

Q

Q

R

V

A

M

M

I

I

V

V

T

T

N

N

E

E

T

T

V
x
L

A

A

P

P

L

L

Y

Y

L

L

E

H

P

K

V

I

R

Q

Q

T

A

V

L

L

D

E

-

V

-

S

G

G

L

V

Q

K

V

V

R

D

E

S

V

I

I

I

L

L

P

P

D
|
D

G

G

E
|
E

V

Q

Y

Y

K
|
K

T

S

L

L

E

F

V

I

W

M

N

N

R

D

I

V

F

F

D

T

A

A

L

L

L

L

A

E

E

K

R

H

F

H

A

N

R

R

D

D

C

T

T

T

L

L

I

I

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

L

T

T

G

G

F

F

A

A

A

A

A

A

C

S

Y

Y

Q

Q

R
|
R

G

G

V

V

D

R

F

F

I

I

Q

Q

V

V

P

P

T
|
T

T
|
T

L

L

L
|
L

A

S

Q

Q

V

V

D
|
D

S
|
S

S

S

V

V

G

G

G

G

K
|
K

T

T

G

A

L

V

N

N

H

H

P

P

A

L

G

G

K

K

N

N

M

M

I

I

G

G

A

A

F

F

H

Y

Q

Q

P

P

R

A

A

S

V

V

I

V

A

I

D

D

T

L

D

D

T
x
C

L

L

V

K

T
|
T

L
|
L

P
|
P

Q

K

R

R

E
|
E

L

L

S

S

A

S

G

G

M

L

A

A

E
|
E

V

V

L

I

K

K

Y

Y

G

G

F

I

I

I

R

L

D

D

A

G

A

E

F

F

L

F

D

S

W

W

L

L

E

E

C

E

H

N

M

I

T

D

E

A

L

L

M

M

S

A

R

L

D

D

P

N

E

Q

A

A

L

M

A

A

H

Y

A

C

I

I

W

R

R

R

S

C

C

C

E

E

V

L

K
|
K

A

A

Q

Q

I

V

V

V

A

A

E

A

D

D

E

E

F

-

E

-

S

-

G

G

S

L

R
|
R

A

A

L

L

L

L

N
|
N

L

L

G

G

H
|
H

T
|
T

F

F

G

G

H
|
H

A

A

I

I

E

E

A

A

G

E

V

M

G

G

Y

Y

G

G

E

V

W

W

L

L

H
|
H

G

G

E

E

A

A

V

V

G

A

A

A

G

G

I

M

C

V

L

M

A

A

A

A

V

K

L

T

S

A

A

E

R

L

L

I

G

G

W

Q

L

F

T

T

E

P

A

E

E

Q

L

T

K

D

R

R

T

V

R

I

R

A

L

L

I

L

A

K

G

R

A

A

G

E

L

L

P

P

T

V

G

T

R

G

P

P

A

A

E

K

L

M

S

Q

P

P

E

D

R

D

M

Y

L

L

E

P

L

H

M

M

A

M

V

R

D

D

K

K

K

K

V

V

L

M

A

G

G

G

Q

K

L

L

R

H

L

L

V

I

L

L

L

P

R

T

Q

T

L

I

G

G

E

H

A

S

V

E

V

M

T

R

S

S

E

D

F

V

D

D

active site: R121 (= R118), K143 (= K140), E185 (= E182), K227 (= K224), R238 (= R238), N242 (= N242), H245 (= H245), H249 (= H249), H262 (= H262)
binding (1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid: D137 (= D134), E185 (= E182), K227 (= K224), R238 (= R238), N242 (= N242), H245 (= H245), T246 (= T246), H249 (= H249), H262 (= H262)
binding magnesium ion: E185 (= E182), H245 (= H245), H262 (= H262)
binding nicotinamide-adenine-dinucleotide: L46 (≠ V45), D72 (= D69), E74 (= E71), K77 (= K74), G105 (= G102), G106 (= G103), V107 (= V104), D110 (= D107), T130 (= T127), T131 (= T128), L133 (= L130), D137 (= D134), S138 (= S135), C170 (≠ T167), T173 (= T170), L174 (= L171), P175 (= P172), E178 (= E175)

Q5NFS1 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
47% identity, 97% coverage: 12:354/355 of query aligns to 14:355/359 of Q5NFS1

query
sites
Q5NFS1

S

S

Y

Y

P

N

I

I

H

I

I

V

G

D

S

S

G

V

L

L

L

-

A

-

D

D

G

F

D

S

L

H

Y

I

R

L

P

E

H

Y

L

V

R

T

S

N

L

K

Q

Q

V

V

M

L

I

V

V

V

T

T

N
|
N

E

T

T

T

V

V

A

A

P

K

L

L

Y

Y

L

L

E

T

P

K

V

F

R

L

Q

A

A

A

L

L

-

V

D

D

G

D

L

L

Q

D

V

V

R

R

E

T

V

C

I

I

L

L

P

E

D
|
D

G
|
G

E
|
E

V
x
Q

Y
|
Y

K
|
K

T

S

L

Q

E

Q

V

S

W

L

N

D

R

K

I

I

F

L

D

S

A

T

L

L

L

L

A

E

E

N

R

H

F

F

A

T

R

R

D

N

C

S

T

T

-

V

L

L

I

V

A

A

L

L

G

G

G

G

G
|
G

V
|
V

I
|
I

G
|
G

D
|
D

M

I

T

T

G

G

F

F

A

A

A

A

A

A

C

I

Y

Y

Q

Q

R

R

G

G

V

I

D

D

F

F

I

I

Q

Q

V

I

P

P

T
|
T

T
|
T

L

L

L

L

A

S

Q

Q

V

V

D

D

S

S

S

S

V

V

G

G

G

G

K
|
K

T

T

G

A

L

I

N

N

H

H

P

Q

A

L

G

G

K

K

N

N

M

M

I

I

G

G

A

A

F

F

H

Y

Q

Q

P

P

R

K

A

V

V

V

I

Y

A

T

D

S

T

I

D

E

T
x
F

L
x
Y

V
x
K

T
|
T

L

L

P

P

Q

Q

R

R

E

E

L

Y

S

I

A

A

G

G

M

M

A

A

E

E

V

V

L

V

K

K

Y

Y

G

A

F

F

I

I

R

S

D

K

A

D

A

F

F

Y

L

L

D

-

W

W

L

L

E

D

C

S

H

N

M

R

T

D

E

K

L

I

M

L

S

A

R

K

D

D

P

S

E

V

A

T

L

L

A

I

H

E

A

M

I

V

W

K

R

R

S

S

C

C

E

Q

V

I

K

K

A

A

Q

Q

I

V

V

V

A

A

E

M

D

D

E

E

F

K

E

E

-

L

S

T

G

G

S

A

R

R

A

A

L

I

L

L

N

N

L

F

G

G

H

H

T

T

F

F

G

G

H

H

A

A

I

I

E

E

A

K

G

C

V

Q

G

N

Y

Y

G

R

E

G

W

L

L

K

H

H

G

G

E

E

A

A

V

V

G

G

A

V

G

G

I

M

C

A

L

Q

A

A

A

I

V

D

L

F

S

S

A

H

R

Y

L

L

G

G

W

L

L

I

T

S

E

Q

A

Q

E

Q

L

A

K

K

R

D

T

F

R

N

R

D

L

F

I

I

A

V

G

S

A

F

G

G

L

I

P

S

T

I

G

D

R

F

P

P

A

N

E

D

L

I

S

C

P

Q

E

K

R

E

M

F

L

L

E

E

L

A

M

M

A

L

V

L

D

D

K

K

K

K

V

N

L

S

A

N

G

K

Q

E

L

L

R

K

L

F

V

I

L

L

L

I

R

E

Q

N

L

I

G

G

E

S

A

L

V

S

V

L

T

Q

S

K

E

Q

F

-

D

S

R

K

D

N

E

E

L

L

N

E

H

Q

I

F

L

L

N42 (= N42) binding NAD(+)
DGEQYK 70:75 (≠ DGEVYK 69:74) binding NAD(+)
GVIGD 105:109 (= GVIGD 103:107) binding NAD(+)
TT 129:130 (= TT 127:128) binding NAD(+)
K142 (= K140) binding NAD(+)
FYKT 169:172 (≠ TLVT 167:170) binding NAD(+)

5hvnA 3.0 angstrom crystal structure of 3-dehydroquinate synthase (arob) from francisella tularensis in complex with NAD.
46% identity, 97% coverage: 12:354/355 of query aligns to 17:350/354 of 5hvnA

query
sites
5hvnA

S

S

Y

Y

P

N

I

I

H

I

I

V

G

D

S

S

G

V

L

L

L

-

A

-

D

D

G

F

D

S

L

H

Y

I

R

L

P

E

H

Y

L

V

R

T

S

N

L

K

Q

Q

V

V

M

L

I

V

V

V

T

T

N
|
N

E

T

T

T

V

V

A

A

P

K

L
|
L

Y

Y

L

L

E

T

P

K

V

F

R

L

Q

A

A

A

L

L

-

V

D

D

G

D

L

L

Q

D

V

V

R

R

E

T

V

C

I

I

L

L

P

E

D
|
D

G

G

E
|
E

V

Q

Y

Y

K
|
K

T

S

L

Q

E

Q

V

S

W

L

N

D

R

K

I

I

F

L

D

S

A

T

L

L

L

L

A

E

E

N

R

H

F

F

A

T

R

R

D

N

C

S

T

T

-

V

L

L

I

V

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

I

T

T

G

G

F

F

A

A

A

A

A

A

C

I

Y

Y

Q

Q

R
|
R

G

G

V

I

D

D

F

F

I

I

Q

Q

V

I

P

P

T
|
T

T
|
T

L

L

L
|
L

A

S

Q

Q

V

V

D
|
D

S

S

S

S

V

V

G

G

G

G

K
|
K

T

T

G

A

L

I

N

N

H

H

P

Q

A

L

G

G

K

K

N

N

M

M

I

I

G

G

A

A

F

F

H

Y

Q

Q

P

P

R

K

A

V

V

V

I

Y

A

T

D

S

T

I

D

E

T
x
F

L

Y

V

K

T
|
T

L
|
L

P

P

Q

Q

R

R

E
|
E

L

Y

S

I

A

A

G

G

M

M

A

A

E
|
E

V

V

L

V

K

K

Y

Y

G

A

F

F

I

I

R

S

D

K

A

D

A

F

F

Y

L

L

D

-

W

W

L

L

E

D

C

S

H

N

M

R

T

D

E

K

L

I

M

L

S

A

R

K

D

D

P

S

E

V

A

T

L

L

A

I

H

E

A

M

I

V

W

K

R

R

S

S

C

C

E

Q

V

I

K
|
K

A

A

Q

Q

I

V

V

V

A

A

E

M

D

D

E

-

F

-

E

-

S

T

G

G

S

A

R
|
R

A

A

L

I

L

L

N
|
N

L

F

G

G

H
|
H

T

T

F

F

G

G

H
|
H

A

A

I

I

E

E

A

K

G

C

V

Q

G

N

Y

Y

G

R

E

G

W

L

L

K

H
|
H

G

G

E

E

A

A

V

V

G

G

A

V

G

G

I

M

C

A

L

Q

A

A

A

I

V

D

L

F

S

S

A

H

R

Y

L

L

G

G

W

L

L

I

T

S

E

Q

A

Q

E

Q

L

A

K

K

R

D

T

F

R

N

R

D

L

F

I

I

A

V

G

S

A

F

G

G

L

I

P

S

T

I

G

D

R

F

P

P

A

N

E

D

L

I

S

C

P

Q

E

K

R

E

M

F

L

L

E

E

L

A

M

M

A

L

V

L

D

D

K

N

K

K

V

-

L

-

A

-

G

-

Q

E

L

L

R

K

L

F

V

I

L

L

L

I

R

E

Q

N

L

I

G

G

E

S

A

L

V

S

V

L

T

Q

S

K

E

Q

F

-

D

S

R

K

D

N

E

E

L

L

N

E

H

Q

I

F

L

L

active site: R123 (= R118), K145 (= K140), E187 (= E182), K228 (= K224), R239 (= R238), N243 (= N242), H246 (= H245), H250 (= H249), H263 (= H262)
binding nicotinamide-adenine-dinucleotide: N45 (= N42), L51 (= L48), D73 (= D69), E75 (= E71), K78 (= K74), G107 (= G102), G108 (= G103), V109 (= V104), D112 (= D107), T132 (= T127), T133 (= T128), L135 (= L130), D139 (= D134), K145 (= K140), F172 (≠ T167), T175 (= T170), L176 (= L171), E180 (= E175)

P56081 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) (see paper)
38% identity, 100% coverage: 1:354/355 of query aligns to 1:339/343 of P56081

query
sites
P56081

M

M

R

Q

T

E

L

I

N

L

V

I

D

P

L

L

G

K

A

E

R

K

S

N

Y

Y

P

K

I

V

H

F

I

L

G

G

S

E

G

-

L

-

L

-

A

-

D

-

G

-

D

-

L

-

Y

-

R

L

P

P

H

E

L

I

R

K

S

L

L

K

Q

Q

-

K

V

A

M

L

I

I

V

I

T

S

N

D

E

S

T

I

V

V

A

A

P

G

L

L

Y

H

L

L

E

P

P

Y

V

L

R

L

Q

E

A

R

L

L

D

K

G

A

L

L

Q

E

V

V

R

R

E

V

V

C

I

V

L

I

P

E

D
x
S

G
|
G

E
|
E

V
x
K

Y
|
Y

K
|
K

T

N

L

F

E

H

V

S

W

L

N

E

R

R

I

I

F

L

D

N

A

N

L

A

L

F

A

E

E

M

R

Q

F

L

A

N

R

R

D

H

C

S

T

L

L

M

I

I

A

A

L

L

G

G

G

G

G
|
G

V
|
V

I

I

G

S

D

D

M

M

T

V

G

G

F

F

A

A

A

S

A

S

C

I

Y

Y

Q

F

R

R

G

G

V

I

D

D

F

F

I

I

Q

N

V

I

P

P

T
|
T

T
|
T

L

L

L

L

A

A

Q

Q

V

V

D

D

S

A

S

S

V

V

G

G

G

G

K

K

T

T

G

G

L

I

N

N

H

T

P

P

A

Y

G

G

K

K

N
|
N

M

L

I

I

G

G

A

S

F

F

H

H

Q

Q

P

P

R

K

A

A

V

V

I

Y

A

M

D

D

T

L

D

A

T
x
F

L
|
L

V
x
K

T
|
T

L

L

P

E

Q

K

R

R

E

E

L

F

S

Q

A

A

G

G

M

V

A

A

E

E

V

I

L

I

K

K

Y

M

G

A

F

V

I

C

R

F

D

D

A

K

A

N

F

L

L

V

D

E

W

R

L

L

E

E

C

-

H

-

M

-

T

-

E

-

L

-

M

-

S

T

R

K

D

D

-

L

P

K

E

D

A

C

L

L

A

E

H

E

A

V

I

I

W

F

R

Q

S

S

C

V

E

N

V

I

K

K

A

A

Q

Q

I

V

V

V

A

V

E

Q

D

D

E

E

F

K

E

E

S

Q

G

N

S

I

R

R

A

A

L

G

L

L

N

N

L

Y

G

G

H

H

T

T

F

F

G

G

H

H

A

A

I

I

E

E

A

K

G

E

V

T

G

D

Y

Y

G

E

E

R

W

F

L

L

H

H

G

G

E

E

A

A

V

I

G

A

A

I

G

G

I

M

C

R

L

M

A

A

A

N

V

D

L

L

S

A

A

L

R

S

L

L

G

G

W

M

L

L

T

T

E

L

A

K

E

E

L

Y

K

E

R

R

T

I

R

E

R

N

L

L

I

L

A

K

G

K

A

F

G

D

L

L

P

I

T

F

G

H

R

Y

P

K

A

I

E

-

L

L

S

D

P

L

E

Q

R

K

M

F

L

Y

E

E

L

R

M

L

A

F

V

L

D

D

K

K

K

K

V

S

L

E

A

N

G

K

Q

T

L

I

R

K

L

F

V

I

L

L

L

P

R

K

Q

G

L

V

G

G

E

A

A

F

V

E

V

V

T

A

S

S

E

H

F

I

D

P

R

K

D

E

E

T

L

I

N

I

H

K

I

V

L

L

SGEKYK 61:66 (≠ DGEVYK 69:74) binding NAD(+)
GV 95:96 (= GV 103:104) binding NAD(+)
TT 119:120 (= TT 127:128) binding NAD(+)
N142 (= N150) binding NAD(+)
FLKT 159:162 (≠ TLVT 167:170) binding NAD(+)

P9WPX9 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
45% identity, 80% coverage: 54:338/355 of query aligns to 58:340/362 of P9WPX9

query
sites
P9WPX9

R

R

Q

L

A

A

L

G

D

K

G

G

L

V

Q

D

V

A

R

H

E

R

V

I

I

E

L

I

P

P

D
|
D

G
x
A

E
|
E

V
x
A

Y
x
G

K
|
K

T

D

L

L

E

P

V

V

W

V

N

G

R

F

I

I

F

W

D

E

A

V

L

L

L

G

A

R

E

I

R

G

F

I

A

G

R

R

D

K

C

D

T

A

L

L

I

V

A

S

L

L

G

G

G

G

G
|
G

V
x
A

I
x
A

G
x
T

D
|
D

M

V

T

A

G

G

F

F

A

A

A

A

A

A

C

T

Y

W

Q

L

R

R

G

G

V

V

D

S

F

I

I

V

Q

H

V

L

P

P

T
|
T

T
|
T

L

L

L

L

A

G

Q

M

V

V

D

D

S

A

S

A

V

V

G

G

G

G

K
|
K

T

T

G

G

L

I

N

N

H

T

P

D

A

A

G

G

K

K

N

N

M

L

I

V

G

G

A

A

F

F

H

H

Q

Q

P

P

R

L

A

A

V

V

I

L

A

V

D

D

T

L

D

A

T
|
T

L
|
L

V
x
Q

T
|
T

L

L

P

P

Q

R

R

D

E

E

L

M

S

I

A

C

G

G

M

M

A

A

E

E

V

V

L

V

K

K

Y

A

G

G

F

F

I

I

R

A

D

D

A

P

A

V

F

I

L

L

D

D

W

L

L

I

E

E

C

A

H

D

M

P

T

Q

E

A

L

A

M

L

S

D

R

P

D

A

P

G

E

D

A

V

L

L

A

P

H

E

A

L

I

I

W

R

R

R

S

A

C

I

E

T

V

V

K

K

A

A

Q

E

I

V

V

V

A

A

E

A

D

D

E

E

F

K

E

E

S

S

G

E

S

L

R

R

A

E

L

I

L

L

N

N

L

Y

G

G

H

H

T

T

F

L

G

G

H

H

A

A

I

I

E

E

A

R

G

R

V

E

G

R

Y

Y

G

-

E

R

W

W

L

R

H

H

G

G

E

A

A

A

V

V

G

S

A

V

G

G

I

L

C

V

L

F

A

A

A

A

V

E

L

L

S

A

A

R

R

L

L

A

G

G

W

R

L

L

T

D

E

D

A

A

E

T

L

A

K

Q

R

R

T

H

R

R

R

T

L

I

I

L

A

S

G

S

A

L

G

G

L

L

P

P

T

V

G

S

R

Y

P

D

A

P

E

D

L

A

S

L

P

P

E

Q

R

-

M

L

L

L

E

E

L

I

M

M

A

A

V

G

D

D

K

K

K

K

V

T

L

R

A

A

G

G

Q

V

L

L

R

R

L

F

V

V

L

V

L

L

R

D

Q

G

L

L

G

A

E

K

DAEAGK 73:78 (≠ DGEVYK 69:74) binding NAD(+)
GAATD 107:111 (≠ GVIGD 103:107) binding NAD(+)
TT 131:132 (= TT 127:128) binding NAD(+)
K144 (= K140) binding NAD(+)
TLQT 171:174 (≠ TLVT 167:170) binding NAD(+)

Sites not aligning to the query:

45 binding NAD(+)

3clhA Crystal structure of 3-dehydroquinate synthase (dhqs)from helicobacter pylori (see paper)
44% identity, 73% coverage: 36:295/355 of query aligns to 25:269/308 of 3clhA

query
sites
3clhA

Q

K

V

A

M

L

I

I

V

I

T

S

N

D

E

S

T
x
I

V
|
V

A

A

P

G

L

L

Y
x
H

L

L

E

P

P

Y

V

L

R

L

Q

E

A

R

L

L

D

K

G

A

L

L

Q

E

V

V

R

R

E

V

V

C

I

V

L

I

P

E

D
x
S

G

G

E
|
E

V

K

Y

Y

K
|
K

T

N

L

F

E

H

V

S

W

L

N

E

R

R

I

I

F

L

D

N

A

N

L

A

L

F

A

E

E

M

R

Q

F

L

A

N

R

R

D

H

C

S

T

L

L

M

I

I

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

S

D
|
D

M

M

T

V

G

G

F

F

A

A

A

S

A

S

C

I

Y

Y

Q

F

R
|
R

G

G

V

I

D

D

F

F

I

I

Q

N

V

I

P

P

T
|
T

T
|
T

L

L

L
|
L

A

A

Q

Q

V

V

D
|
D

S
x
A

S

S

V

V

G

G

G

G

K
|
K

T

T

G

G

L

I

N

N

H

T

P

P

A

Y

G

G

K

K

N
|
N

M

L

I

I

G

G

A

S

F

F

H

H

Q

Q

P

P

R

K

A

A

V

V

I

Y

A

M

D

D

T

L

D

A

T

F

L

L

V

K

T
|
T

L
|
L

P

E

Q

K

R

R

E
|
E

L

F

S

Q

A

A

G

G

M

V

A

A

E
|
E

V

I

L

I

K

K

Y

M

G

A

F

V

I

C

R

F

D

D

A

K

A

N

F

L

L

V

D

E

W

R

L

L

E

E

C

-

H

-

M

-

T

-

E

-

L

-

M

-

S

T

R

K

D

D

-

L

P

K

E

D

A

C

L

L

A

E

H

E

A

V

I

I

W

F

R

Q

S

S

C

V

E

N

V

I

K
|
K

A

A

Q

Q

I

V

V

V

A

-

E

-

D

-

E

-

F

-

E

-

S

-

G

-

S

-

R
|
R

A

A

L

G

L

L

N
|
N

L

Y

G

G

H
|
H

T

T

F

F

G

G

H
|
H

A

A

I

I

E

E

A

K

G

E

V

T

G

D

Y

Y

G

E

E

R

W

F

L

L

H
|
H

G

G

E

E

A

A

V

I

G

A

A

I

G

G

I

M

C

R

L

M

A

A

A

N

V

D

L

L

S

A

A

L

R

S

L

L

G

G

W

M

L

L

T

T

E

L

A

K

E

E

L

Y

K

E

R

R

T

I

R

E

R

N

L

L

I

L

active site: R107 (= R118), K129 (= K140), E171 (= E182), K207 (= K224), R212 (= R238), N216 (= N242), H219 (= H245), H223 (= H249), H236 (= H262)
binding nicotinamide-adenine-dinucleotide: I33 (≠ T44), V34 (= V45), H38 (≠ Y49), S58 (≠ D69), E60 (= E71), K63 (= K74), G91 (= G102), G92 (= G103), V93 (= V104), D96 (= D107), T116 (= T127), T117 (= T128), L119 (= L130), D123 (= D134), A124 (≠ S135), K129 (= K140), N139 (= N150), T159 (= T170), L160 (= L171), E164 (= E175)

3qbeA Crystal structure of the 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis
44% identity, 80% coverage: 54:338/355 of query aligns to 53:331/352 of 3qbeA

query
sites
3qbeA

R

R

Q

L

A

A

L

G

D

K

G

G

L

V

Q

D

V

A

R

H

E

R

V

I

I

E

L

I

P

P

D

D

G

A

E

E

V

A

Y

G

K

K

T

D

L

L

E

P

V

V

W

V

N

G

R

F

I

I

F

W

D

E

A

V

L

L

L

G

A

R

E

I

R

G

F

I

A

G

R

R

D

K

C

D

T

A

L

L

I

V

A

S

L

L

G

G

G

G

G

G

V

A

I

A

G

T

D

D

M

V

T

A

G

G

F

F

A

A

A

A

A

A

C

T

Y

W

Q

L

R
|
R

G

G

V

V

D

S

F

I

I

V

Q

H

V

L

P

P

T

T

T

T

L

L

L

L

A

G

Q

M

V

V

D

D

S

A

S

A

V

V

G

G

G

G

K
|
K

T

T

G

G

L

I

N

N

H

T

P

D

A

A

G

G

K

K

N

N

M

L

I

V

G

G

A

A

F

F

H

H

Q

Q

P

P

R

L

A

A

V

V

I

L

A

V

D

D

T

L

D

A

T

T

L

L

V

Q

T

T

L

L

P

P

Q

R

R

D

E

E

L

M

S

I

A

C

G

G

M

M

A

A

E
|
E

V

V

L

V

K

K

Y

A

G

G

F

F

I

I

R

A

D

D

A

P

A

V

F

I

L

L

D

D

W

L

L

I

E

E

C

A

H

D

M

P

T

Q

E

A

L

A

M

L

S

D

R

P

D

A

P

G

E

D

A

V

L

L

A

P

H

E

A

L

I

I

W

R

R

R

S

A

C

I

E

T

V

V

K
|
K

A

A

Q

E

I

V

V

V

A

A

E

A

D

S

E

E

F

L

E

-

S

-

G

-

S

-

R
|
R

A

E

L

I

L

L

N
|
N

L

Y

G

G

H
|
H

T

T

F

L

G

G

H
|
H

A

A

I

I

E

E

A

R

G

R

V

E

G

R

Y

Y

G

-

E

R

W

W

L

R

H
|
H

G

G

E

A

A

A

V

V

G

S

A

V

G

G

I

L

C

V

L

F

A

A

A

A

V

E

L

L

S

A

A

R

R

L

L

A

G

G

W

R

L

L

T

D

E

D

A

A

E

T

L

A

K

Q

R

R

T

H

R

R

R

T

L

I

I

L

A

S

G

S

A

L

G

G

L

L

P

P

T

V

G

S

R

Y

P

D

A

P

E

D

L

A

S

L

P

P

E

Q

R

-

M

L

L

L

E

E

L

I

M

M

A

A

V

G

D

D

K

K

K

K

V

T

L

R

A

A

G

G

Q

V

L

L

R

R

L

F

V

V

L

V

L

L

R

D

Q

G

L

L

G

A

E

K

active site: R117 (= R118), K139 (= K140), E181 (= E182), K223 (= K224), R233 (= R238), N237 (= N242), H240 (= H245), H244 (= H249), H256 (= H262)
binding zinc ion: E181 (= E182), H240 (= H245), H256 (= H262)

Q6GGU4 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Staphylococcus aureus (strain MRSA252) (see paper)
36% identity, 94% coverage: 10:341/355 of query aligns to 9:334/354 of Q6GGU4

query
sites
Q6GGU4

A

S

R

N

S

N

Y

Y

P

P

I

I

H

F

I

V

G

E

S

H

G

G

L

A

L

I

A

D

D

H

G

I

D

S

L

T

Y

Y

R

I

P

D

H

Q

L

F

R

D

S

-

L

-

Q

Q

V

S

M

F

I

I

V

L

T

I

N
x
D

E

E

T

H

V

V

A

N

P

Q

L
x
Y

Y

F

L

A

E

D

P

K

V

F

R

N

Q

D

A

I

L

L

D

S

G

Y

L

E

Q

N

V

V

R

H

E

K

V

V

I

I

L

I

P

P

D

A

G

G

E
|
E

V
x
K

Y
x
T

K
|
K

T

T

L

F

E

E

V

Q

W

Y

N

Q

R

E

I

T

F

L

D

E

A

Y

L

I

L

L

A

S

E

H

R

H

F

V

A

T

R

R

D

N

C

T

T

A

L

I

I

I

A

A

L

V

G

G

G

G

G
|
G

V
x
A

I
x
T

G
|
G

D
|
D

M

F

T

A

G

G

F

F

A

V

A

A

A

A

C

T

Y

L

Q

L

R

R

G

G

V

V

D

H

F

F

I

I

Q

Q

V

V

P

P

T
|
T

T
|
T

L

I

L

L

A

A

Q

H

V

-

D

D

S

S

S

S

V

V

G

G

G

G

K
|
K

T

V

G

G

L

I

N

N

H

S

P

K

A

Q

G

G

K
|
K

N

N

M

L

I

I

G

G

A

A

F

F

H

Y

Q

R

P

P

R

T

A

A

V

V

I

I

A

Y

D

D

T

L

D

D

T
x
F

L
|
L

V
x
K

T
|
T

L

L

P

P

Q

F

R

E

E

Q

L

I

S

L

A

S

G

G

M

Y

A

A

E
|
E

V

V

L

Y

K

K

Y

H

G

A

F

L

I

L

R

N

D

G

A

E

A

S

F

A

L

T

D

Q

W

D

L

I

E

E

C

Q

H

H

M

F

T

K

E

D

L

R

-

E

M

I

S

L

R

Q

D

S

P

L

E

K

A

G

L

M

A

D

H

K

A

Y

I

I

W

A

R

K

S

G

C

I

E

E

V

T

K

K

A

L

Q

D

I

I

V

V

A

V

E

A

D

D

E

E

F

K

E

E

S

Q

G

G

S

V

R

R

A

K

L

F

L

L

N

N

L

L

G

G

H
|
H

T

T

F

F

G

G

H

H

A

A

I

V

E

E

A

Y

G

-

V

-

G

-

Y

Y

G

H

E

K

W

I

L

P

H
|
H

G

G

E

H

A

A

V

V

G

M

A

V

G

G

I

I

C

I

L

Y

A

Q

A

F

V

I

L

V

S

A

A

N

R

A

L

L

G

-

W

F

L

D

T

S

E

K

A

H

E

D

L

I

K

N

R

H

T

Y

R

I

R

Q

L

Y

I

L

A

I

G

Q

A

L

G

G

L

Y

P

P

T

L

G

D

R

M

P

I

A

T

E

D

L

L

S

D

P

F

E

E

R

T

M

L

L

Y

E

Q

L

Y

M

M

A

L

V

S

D

D

K

K

K

K

V

N

L

D

A

K

G

Q

Q

G

L

V

R

Q

L

M

V

V

L

L

L

I

R

R

Q

Q

L

F

G

G

E

D

A

I

V

V

V

V

D39 (≠ N42) binding NAD(+)
Y45 (≠ L48) binding NAD(+)
EKTK 68:71 (≠ EVYK 71:74) binding NAD(+)
GATGD 100:104 (≠ GVIGD 103:107) binding NAD(+)
TT 124:125 (= TT 127:128) binding NAD(+)
K136 (= K140) binding NAD(+)
K145 (= K149) binding NAD(+)
FLKT 163:166 (≠ TLVT 167:170) binding NAD(+)
E178 (= E182) binding Zn(2+)
H242 (= H245) binding Zn(2+)
H256 (= H262) binding Zn(2+)

6hqvA Pentafunctional arom complex from chaetomium thermophilum (see paper)
40% identity, 86% coverage: 32:338/355 of query aligns to 32:366/1555 of 6hqvA

query
sites
6hqvA

L

L

R

P

S

S

L

S

Q

T

V

Y

M

V

I

L

V

I

T

T

N
x
D

E

T

T
x
N

V
x
L

A

Y

P

T

L

T

Y

Y

L

V

E

P

P

P

V

F

R

Q

Q

A

A

V

L

F

D

E

G

A

L

A

Q

A

V

P

R

R

E

D

V

V

I

R

L

L

-

L

-

T

-

Y

-

A

-

I

P

P

D

P

G

G

E
|
E

V

Y

Y

S

K
|
K

T

S

L

R

E

E

V

T

W

K

N

A

R

E

I

I

F

E

D

D

A

W

L

M

L

L

A

S

E

H

R

A

F

C

A

T

R

R

D

D

C

T

T

V

L

I

I

I

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

M

T

I

G

G

F

Y

A

V

A

A

A

A

C

T

Y

F

Q

M

R
|
R

G

G

V

V

D

R

F

F

I

V

Q

Q

V

V

P

P

T
|
T

T
|
T

L

L

L
|
L

A

A

Q

M

V

V

D
|
D

S
|
S

S

S

V

I

G

G

G

G

K
|
K

T

T

G

A

L

I

N

D

H

T

P

P

A

M

G

G

K
|
K

N

N

M

L

I

I

G

G

A

A

F

F

H

W

Q

Q

P

P

R

R

A

R

V

I

I

Y

A

I

D

D

T

L

D

A

T

F

L

L

V

E

T
|
T

L
|
L

P
|
P

Q

V

R

R

E
|
E

L

F

S

I

A

N

G

G

M

M

A

A

E
|
E

V

V

L

I

K

K

Y

T

G

A

F

A

I

I

R

W

D

N

A

E

A

T

F

E

L

F

D

T

W

A

L

L

E

E

C

E

H

N

M

A

T

A

E

A

L

I

M

L

-

E

-

A

-

V

-

R

-

S

-

K

S

A

R

S

D

S

P

P

E

A

A

A

-

R

-

L

-

A

-

P

L

I

A

R

H

H

A

I

I

L

W

K

R

R

-

I

-

V

-

L

-

G

S

S

C

A

E

R

V

V

K
|
K

A

A

Q

E

I

V

V

V

A

S

E

A

D

D

E

E

F

R

E
|
E

S

G

G

G

S

L

R
|
R

A

N

L

L

L

L

N
|
N

L

F

G

G

H
|
H

T

S

F

I

G

G

H
|
H

A

A

I

Y

E

E

A

A

G

-

V

I

G

L

Y

A

G

P

E

Q

W

V

L

L

H
|
H

G

G

E

E

A

C

V

V

G

A

A

I

G

G

I

M

C

V

L

K

A

E

A

A

V

E

L

L

S

A

A

R

R

Y

L

L

G

G

W

V

L

L

T

R

E

P

A

S

E

A

L

V

K

A

R

R

T

L

R

T

R

K

L

L

I

I

A

A

G

S

A

Y

G

D

L

L

P

P

T

T

G

S

-

V

-

H

-

D

-

K

R

R

P

I

A

A

E

K

L

L

S

S

P

A

E

G

R

K

-

E

-

C

-

P

-

V

-

D

-

V

M

L

L

L

E

Q

L

K

M

M

A

A

V

V

D

D

K

K

K

K

V

N

L

E

A

G

G

R

Q

K

L

K

R

K

L

I

V

V

L

L

L

L

R

S

Q

A

L

I

G

G

E

K

active site: R123 (= R118), K145 (= K140), E187 (= E182), K243 (= K224), E253 (= E234), R257 (= R238), N261 (= N242), H264 (= H245), H268 (= H249), H280 (= H262)
binding glutamic acid: D139 (= D134), K145 (= K140), E187 (= E182), K243 (= K224), R257 (= R238), H264 (= H245), H280 (= H262)
binding nicotinamide-adenine-dinucleotide: D42 (≠ N42), N44 (≠ T44), L45 (≠ V45), E76 (= E71), K79 (= K74), G107 (= G102), G108 (= G103), V109 (= V104), D112 (= D107), T132 (= T127), T133 (= T128), L135 (= L130), D139 (= D134), S140 (= S135), K145 (= K140), K154 (= K149), T175 (= T170), L176 (= L171), P177 (= P172), E180 (= E175), H280 (= H262)
binding zinc ion: E187 (= E182), H264 (= H245), H280 (= H262)

Sites not aligning to the query:

binding (4S,5R)-4,5-dihydroxy-3-oxocyclohex-1-ene-1-carboxylic acid: 1060, 1062, 1181, 1224, 1232, 1242, 1243
binding (3r,4s,5r)-3,4,5-trihydroxycyclohex-1-ene-1-carboxylic acid: 413, 562, 563, 874, 923, 924, 979, 1277, 1279, 1323, 1327, 1348, 1368, 1526

1xagA Crystal structure of staphlyococcus aureus 3-dehydroquinate synthase (dhqs) in complex with zn2+, NAD+ and carbaphosphonate (see paper)
36% identity, 97% coverage: 10:352/355 of query aligns to 9:344/353 of 1xagA

query
sites
1xagA

A

S

R

N

S

N

Y

Y

P

P

I

I

H

Y

I

V

G

E

S

H

G

G

L

A

L

I

A

K

D

Y

G

I

D

G

L

T

Y

Y

R

L

P

N

H

Q

L

F

R

D

S

-

L

-

Q

Q

V

S

M

F

I

L

V

L

T

I

N
x
D

E

E

T
x
Y

V
|
V

A

N

P

Q

L
x
Y

Y

F

L

A

E

N

P

K

V

F

R

D

Q

D

A

I

L

L

D

S

G

Y

L

E

Q

N

V

V

R

H

E

K

V

V

I

I

L

I

P

P

D

A

G

G

E
|
E

V

K

Y

T

K
|
K

T

T

L

F

E

E

V

Q

W

Y

N

Q

R

E

I

T

F

L

D

E

A

Y

L

I

L

L

A

S

E

H

R

H

F

V

A

T

R

R

D

N

C

T

T

A

L

I

I

I

A

A

L

V

G

G

G
|
G

G
|
G

V
x
A

I

T

G

G

D
|
D

M

F

T

A

G

G

F

F

A

V

A

A

A

A

C

T

Y

L

Q

L

R
|
R

G

G

V

V

D

H

F

F

I

I

Q

Q

V

V

P

P

T
|
T

T
|
T

L

I

L
|
L

A

A

Q

H

V

-

D
|
D

S
|
S

S

S

V

V

G

G

G

G

K
|
K

T

V

G

G

L

I

N

N

H

S

P

K

A

Q

G

G

K
|
K

N
|
N

M

L

I

I

G

G

A

A

F

F

H

Y

Q

R

P

P

R

T

A

A

V

V

I

I

A

Y

D

D

T

L

D

D

T

F

L

L

V

K

T
|
T

L
|
L

P

P

Q

F

R

K

E
x
Q

L

I

S

L

A

S

G

G

M

Y

A

A

E
|
E

V

V

L

Y

K

K

Y

H

G

A

F

L

I

L

R

N

D

G

A

E

A

S

F

A

L

T

D

Q

W

D

L

I

E

E

C

Q

H

H

M

F

T

K

E

D

L

R

-

E

M

I

S

L

R

Q

D

S

P

L

E

N

A

G

L

M

A

D

H

K

A

Y

I

I

W

A

R

K

S

G

C

I

E

E

V

T

K
|
K

A

L

Q

D

I

I

V

V

A

V

E

A

D

D

E

E

F

K

E
|
E

S

Q

G

G

S

V

R
|
R

A

K

L

F

L
|
L

N
|
N

L

L

G

G

H
|
H

T

T

F

F

G

G

H
|
H

A

A

I

V

E

E

A

Y

G

-

V

-

G

-

Y

Y

G

H

E

K

W

I

L

P

H
|
H

G

G

E

H

A

A

V

V

G

M

A

V

G

G

I

I

C

I

L

Y

A

Q

A

F

V

I

L

V

S

A

A

N

R

A

L

L

G

-

W

F

L

D

T

S

E

K

A

H

E

D

L

I

K

S

R

H

T

Y

R

I

R

Q

L

Y

I

L

A

I

G

Q

A

L

G

G

L

Y

P

P

T

L

G

D

R

M

P

I

A

T

E

D

L

L

S

D

P

F

E

E

R

T

M

L

L

Y

E

Q

L

Y

M

M

A

L

V

S

D

D

K
|
K

K

K

V

N

L

D

A

K

G

Q

Q

G

L

V

R

Q

L

M

V

V

L

L

L

M

R

R

Q

Q

L

F

G

G

E

D

A

I

V

V

V

V

T

-

S

Q

E

H

F

V

D

D

R

Q

D

L

E

T

L

L

N

Q

H

H

active site: R115 (= R118), K136 (= K140), E178 (= E182), K221 (= K224), E231 (= E234), R235 (= R238), N239 (= N242), H242 (= H245), H246 (= H249), H256 (= H262)
binding [1r-(1alpha,3beta,4alpha,5beta)]-5-(phosphonomethyl)-1,3,4-trihydroxycyclohexane-1-carboxylic acid: K136 (= K140), N146 (= N150), E178 (= E182), K221 (= K224), R235 (= R238), L238 (= L241), N239 (= N242), H242 (= H245), H246 (= H249), K314 (= K321)
binding nicotinamide-adenine-dinucleotide: D39 (≠ N42), Y41 (≠ T44), V42 (= V45), Y45 (≠ L48), E68 (= E71), K71 (= K74), G99 (= G102), G100 (= G103), A101 (≠ V104), D104 (= D107), T124 (= T127), T125 (= T128), L127 (= L130), D130 (= D134), S131 (= S135), K136 (= K140), K145 (= K149), T166 (= T170), L167 (= L171), Q171 (≠ E175), H256 (= H262)
binding zinc ion: E178 (= E182), H242 (= H245), H256 (= H262)

3qbdA 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis in complex with NAD
42% identity, 80% coverage: 54:338/355 of query aligns to 53:323/344 of 3qbdA

query
sites
3qbdA

R

R

Q

L

A

A

L

G

D

K

G

G

L

V

Q

D

V

A

R

H

E

R

V

I

I

E

L

I

P

P

D
|
D

G
x
A

E
|
E

V

A

Y

G

K
|
K

T

D

L

L

E

P

V

V

W

V

N

G

R

F

I

I

F

W

D

E

A

V

L

L

L

G

A

R

E

I

R

G

F

I

A

G

R

R

D

K

C

D

T

A

L

L

I

V

A

S

L

L

G

G

G
|
G

G
|
G

V
x
A

I

A

G

T

D
|
D

M

V

T

A

G

G

F

F

A

A

A

A

A

A

C

T

Y

W

Q

L

R
|
R

G

G

V

V

D

S

F

I

I

V

Q

H

V

L

P

P

T
|
T

T
|
T

L

L

L
|
L

A

G

Q

M

V

V

D

D

S
x
A

S

A

V

V

G

G

G

G

K
|
K

T

T

G

G

L

I

N

N

H

T

P

D

A

A

G

G

K

K

N

N

M

L

I

V

G

G

A

A

F

F

H

H

Q

Q

P

P

R

L

A

A

V

V

I

L

A

V

D

D

T

L

D

A

T

T

L

L

V

Q

T
|
T

L
|
L

P

P

Q

R

R

D

E

E

L

M

S

I

A

C

G

G

M

M

A

A

E
|
E

V

V

L

V

K

K

Y

A

G

G

F

F

I

I

R

A

D

D

A

P

A

V

F

I

L

L

D

D

W

L

L

I

E

E

C

A

H

D

M

P

T

Q

E

A

L

A

M

L

S

D

R

P

D

A

P

G

E

D

A

V

L

L

A

P

H

E

A

L

I

I

W

R

R

R

S

A

C

I

E

T

V

V

K
|
K

A

A

Q

E

I

V

V

V

A

A

E

A

D

E

E

-

F

-

E

-

S

-

G

-

S

L

R
|
R

A

E

L

I

L

L

N
|
N

L

Y

G

G

H
|
H

T

T

F

L

G

G

H
|
H

A

A

I

I

E

E

A

R

G

R

V

E

G

R

Y

Y

G

-

E

R

W

W

L

R

H
|
H

G

G

E

A

A

A

V

V

G

S

A

V

G

G

I

L

C

V

L

F

A

A

A

A

V

E

L

L

S

A

A

R

R

L

L

A

G

G

W

R

L

L

T

D

E

D

A

A

E

T

L

A

K

Q

R

R

T

H

R

R

R

T

L

I

I

L

A

S

G

S

A

L

G

G

L

L

P

P

T

V

G

S

R

Y

P

D

A

P

E

D

L

A

S

L

P

P

E

Q

R

-

M

L

L

L

E

E

L

I

M

M

A

-

V

-

D

-

K

-

K

-

V

-

L

-

A

A

G

G

Q

V

L

L

R

R

L

F

V

V

L

V

L

L

R

D

Q

G

L

L

G

A

E

K

active site: R117 (= R118), K139 (= K140), E181 (= E182), K223 (= K224), R232 (= R238), N236 (= N242), H239 (= H245), H243 (= H249), H255 (= H262)
binding nicotinamide-adenine-dinucleotide: D68 (= D69), A69 (≠ G70), E70 (= E71), K73 (= K74), G101 (= G102), G102 (= G103), A103 (≠ V104), D106 (= D107), T126 (= T127), T127 (= T128), L129 (= L130), A134 (≠ S135), T169 (= T170), L170 (= L171)

Sites not aligning to the query:

binding nicotinamide-adenine-dinucleotide: 40

6c5cA Crystal structure of the 3-dehydroquinate synthase (dhqs) domain of aro1 from candida albicans sc5314 in complex with nadh (see paper)
42% identity, 76% coverage: 70:339/355 of query aligns to 82:367/385 of 6c5cA

query
sites
6c5cA

G

G

E
|
E

V

N

Y

N

K
|
K

T

N

L

R

E

A

V

T

W

K

N

A

R

A

I

V

F

E

D

D

A

F

L

L

L

L

A

Q

E

Q

R

G

F

C

A

T

R

R

D

D

C

T

T

V

L

I

I

L

A

A

L

V

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

M

T

I

G

G

F

F

A

V

A

A

A

A

C

T

Y

F

Q

M

R
|
R

G

G

V

V

D

R

F

V

I

V

Q

Q

V

V

P

P

T
|
T

T
|
T

L

L

L

L

A

A

Q

M

V

V

D
|
D

S
|
S

S

S

V

V

G

G

G

G

K
|
K

T

T

G

A

L

I

N

D

H

T

P

P

A

L

G

G

K

K

N

N

M

F

I

I

G

G

A

A

F

F

H

H

Q

Q

P

P

R

E

A

Y

V

V

I

F

A

C

D

D

T

V

D

S

T
x
F

L

L

V

E

T
|
T

L
|
L

P

P

Q

A

R

R

E
x
Q

L

F

S

I

A

N

G

G

M

M

A

A

E
|
E

V

V

L

V

K

K

Y

T

G

A

F

A

I

I

R

W

D

N

A

E

A

E

F

E

L

F

D

T

W

R

L

L

E

E

C

N

H

F

M

S

T

K

E

K

L

F

M

L

-

S

-

V

-

V

-

T

S

S

R

K

D

K

P

P

E

D

-

L

-

Q

-

S

-

I

-

K

-

A

A

E

L

L

A

V

H

K

A

T

I

V

W

L

R

E

S

S

C

V

E

R

V

V

K
|
K

A

A

Q

G

I

V

V

V

A

S

E

S

D

D

E

-

F

-

E
|
E

S

A

G

G

S

L

R
|
R

A

N

L

L

L

L

N
|
N

L

F

G

G

H
|
H

T

T

F

I

G

G

H
|
H

A

A

I

I

E

E

A

A

G

-

V

V

G

L

Y

T

G

P

E

E

W

A

L

L

H
|
H

G

G

E

E

A

C

V

V

G

S

A

I

G

G

I

M

C

I

L

K

A

E

A

A

V

E

L

L

S

S

A

R

R

Y

L

L

G

G

W

I

L

L

T

P

E

P

A

V

E

A

L

V

K

A

R

R

T

L

R

S

R

K

L

C

I

L

A

V

G

A

A

Y

G

G

L

L

P

P

T

V

G

S

R

I

P

D

-

D

-

K

-

E

-

F

-

L

A

K

E

K

L

V

S

G

P

P

E

K

R

R

-

H

-

Y

-

V

-

E

-

I

-

D

-

I

M

L

L

L

E

K

L

K

M

M

A

A

V

I

D

D

K

K

K

K

V

-

L

-

A

-

G

N

Q

D

L

I

R

R

L

C

V

V

L

L

L

L

R

E

Q

K

L

I

G

G

E

K

A

C

active site: R130 (= R118), K152 (= K140), E194 (= E182), K246 (= K224), E254 (= E234), R258 (= R238), N262 (= N242), H265 (= H245), H269 (= H249), H281 (= H262)
binding nicotinamide-adenine-dinucleotide: E83 (= E71), K86 (= K74), G114 (= G102), G115 (= G103), V116 (= V104), D119 (= D107), T139 (= T127), T140 (= T128), D146 (= D134), S147 (= S135), F179 (≠ T167), T182 (= T170), L183 (= L171), Q187 (≠ E175)

Sites not aligning to the query:

binding nicotinamide-adenine-dinucleotide: 45, 47, 48

1dqsA Crystal structure of dehydroquinate synthase (dhqs) complexed with carbaphosphonate, NAD+ and zn2+ (see paper)
42% identity, 76% coverage: 68:337/355 of query aligns to 75:362/381 of 1dqsA

query
sites
1dqsA

P

P

D

P

G

G

E
|
E

V

V

Y

S

K
|
K

T

S

L

R

E

Q

V

T

W

K

N

A

R

D

I

I

F

E

D

D

A

W

L

M

L

L

A

S

E

Q

R

N

-

P

-

P

F

C

A

G

R

R

D

D

C

T

T

V

L

V

I

I

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

L

T

T

G

G

F

F

A

V

A

A

A

S

C

T

Y

Y

Q

M

R
|
R

G

G

V

V

D

R

F

Y

I

V

Q

Q

V

V

P

P

T
|
T

T
|
T

L

L

L
|
L

A

A

Q

M

V

V

D
|
D

S
|
S

S

S

V

I

G

G

G

G

K
|
K

T

T

G

A

L

I

N

D

H

T

P

P

A

L

G

G

K
|
K

N
|
N

M

L

I

I

G

G

A

A

F

I

H

W

Q

Q

P

P

R

T

A

K

V

I

I

Y

A

I

D

D

T

L

D

E

T

F

L

L

V

E

T
|
T

L

L

P
|
P

Q

V

R

R

E
|
E

L

F

S

I

A

N

G

G

M

M

A

A

E
|
E

V

V

L

I

K

K

Y

T

G

A

F

A

I

I

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S

D

S

A

E

A

E

F

E

L

F

D

T

W

A

L

L

E

E

C

E

H

N

M

A

T

E

E

T

L

I

M

L

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K

R

A

-

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R

-

R

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R

-

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-

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E

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K

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A

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D

E

E

F

R

E
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E

S

G

G

G

S

L

R
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R

A

N

L

L

L
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L

N
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N

L

W

G

G

H
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H

T

S

F

I

G

G

H
|
H

A

A

I

I

E

E

A

A

G

-

V

I

G

L

Y

T

G

P

E

Q

W

I

L

L

H
|
H

G

G

E

E

A

C

V

V

G

A

A

I

G

G

I

M

C

V

L

K

A

E

A

A

V

E

L

L

S

A

A

R

R

H

L

L

G

G

W

I

L

L

T

K

E

G

A

V

E

A

L

V

K

S

R

R

T

I

R

V

R

K

L

C

I

L

A

A

G

A

A

Y

G

G

L

L

P

P

T

T

G

S

-

L

R

K

P

D

A

A

E

R

L

I

-

R

-

K

-

L

-

T

-

A

-

G

-

K

-

H

-

C

S

S

P

V

E

D

R

Q

M

L

L

M

E

F

L

N

M

M

A

A

V

L

D

D

K
|
K

K

K

V

N

L

D

A

G

G

P

Q

K

L

K

R

K

L

I

V

V

L

L

L

L

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Q

A

L

I

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G

active site: R127 (= R118), K149 (= K140), E191 (= E182), K240 (= K224), E250 (= E234), R254 (= R238), N258 (= N242), H261 (= H245), H265 (= H249), H277 (= H262)
binding [1r-(1alpha,3beta,4alpha,5beta)]-5-(phosphonomethyl)-1,3,4-trihydroxycyclohexane-1-carboxylic acid: D143 (= D134), K149 (= K140), N159 (= N150), E191 (= E182), K240 (= K224), R254 (= R238), L257 (= L241), N258 (= N242), H261 (= H245), H265 (= H249), H277 (= H262), K346 (= K321)
binding nicotinamide-adenine-dinucleotide: E78 (= E71), K81 (= K74), G111 (= G102), G112 (= G103), V113 (= V104), D116 (= D107), T136 (= T127), T137 (= T128), L139 (= L130), D143 (= D134), S144 (= S135), K158 (= K149), T179 (= T170), P181 (= P172), E184 (= E175), H277 (= H262)
binding zinc ion: E191 (= E182), H261 (= H245), H277 (= H262)

Sites not aligning to the query:

binding nicotinamide-adenine-dinucleotide: 41, 43, 44

P07547 Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) (see 2 papers)
37% identity, 89% coverage: 21:337/355 of query aligns to 15:372/1583 of P07547

query
sites
P07547

L

I

L

I

A

A

D

D

G

F

D

G

L

L

Y

W

R

R

P

N

H

Y

L

V

-

A

-

K

-

D

-

L

-

I

-

S

-

D

-

C

R

S

S

S

L

T

Q

T

V

Y

M

V

I

L

V

V

T

T

N
x
D

E
x
T

T
x
N

V

I

A

G

P

S

L

I

Y

Y

L

T

-

P

-

S

-

F

-

E

E

E

P

A

V

F

R

R

Q

K

A

A

L

A

D

A

G

E

L

I

Q

T

V

P

R

S

E

P

V

R

I

L

L

L

-

I

-

Y

-

N

-

A

P

P

D

P

G

G

E
|
E

V
|
V

Y
x
S

K
|
K

T

S

L

R

E

Q

V

T

W

K

N

A

R

D

I

I

F

E

D

D

A

W

L

M

L

L

A

S

E

Q

R

N

-

P

-

P

F

C

A

G

R

R

D

D

C

T

T

V

L

V

I

I

A

A

L

L

G

G

G
|
G

G
|
G

V
|
V

I

I

G

G

D
|
D

M

L

T

T

G

G

F

F

A

V

A

A

A

S

C

T

Y

Y

Q

M

R

R

G

G

V

V

D

R

F

Y

I

V

Q

Q

V

V

P

P

T
|
T

T
|
T

L

L

L

L

A

A

Q

M

V

V

D

D

S

S

S

S

V

I

G

G

G

G

K

K

T

T

G

A

L

I

N

D

H

T

P

P

A

L

G

G

K
|
K

N

N

M

L

I

I

G

G

A

A

F

I

H

W

Q

Q

P

P

R

T

A

K

V

I

I

Y

A

I

D

D

T

L

D

E

T
x
F

L
|
L

V
x
E

T
|
T

L

L

P

P

Q

V

R

R

E

E

L

F

S

I

A
x
N

G

G

M

M

A

A

E
|
E

V

V

L

I

K

K

Y

T

G

A

F

A

I

I

R

S

D

S

A

E

A

E

F

E

L

F

D

T

W

A

L

L

E

E

C

E

H

N

M

A

T

E

E

T

L

I

M

L

S

K

-

A

-

V

-

R

R

R

D

E

-

V

-

R

-

P

-

G

-

E

-

H

-

R

-

F

-

E

-

G

-

I

P

E

E

E

A

I

L

L

A

K

H

A

A

R

I

I

W

L

R

A

S

S

C

A

E

R

V

H

K

K

A

A

Q

Y

I

V

V

V

A

S

E

A

D

D

E

E

F

R

E

E

S

G

G

G

S

L

R

R

A

N

L

L

L

L

N

N

L

W

G

G

H
|
H

T

S

F

I

G

G

H

H

A

A

I

I

E

E

A

A

G

-

V

I

G

L

Y

T

G

P

E

Q

W

I

L

L

H
|
H

G

G

E

E

A

C

V

V

G

A

A

I

G

G

I

M

C

V

L

K

A

E

A

A

V

E

L

L

S

A

A

R

R

H

L

L

G

G

W

I

L

L

T

K

E

G

A

V

E

A

L

V

K

S

R

R

T

I

R

V

R

K

L

C

I

L

A

A

G

A

A

Y

G

G

L

L

P

P

T

T

G

S

-

L

R

K

P

D

A

A

E

R

L

I

-

R

-

K

-

L

-

T

-

A

-

G

-

K

-

H

-

C

S

S

P

V

E

D

R

Q

M

L

L

M

E

F

L

N

M

M

A

A

V

L

D

D

K

K

K

K

V

N

L

D

A

G

G

P

Q

K

L

K

R

K

L

I

V

V

L

L

L

L

R

S

Q

A

L

I

G

G

DTN 44:46 (≠ NET 42:44) binding NAD(+)
EVSK 81:84 (≠ EVYK 71:74) binding NAD(+)
GGV 114:116 (= GGV 102:104) binding NAD(+)
D119 (= D107) binding NAD(+)
TT 139:140 (= TT 127:128) binding NAD(+)
K161 (= K149) binding NAD(+)
FLET 179:182 (≠ TLVT 167:170) binding NAD(+)
N190 (≠ A178) binding NAD(+)
E194 (= E182) binding Zn(2+)
H271 (= H245) binding Zn(2+)
H287 (= H262) binding Zn(2+)

Query Sequence

>WP_012972225.1 NCBI__GCF_000025485.1:WP_012972225.1
MRTLNVDLGARSYPIHIGSGLLADGDLYRPHLRSLQVMIVTNETVAPLYLEPVRQALDGL
QVREVILPDGEVYKTLEVWNRIFDALLAERFARDCTLIALGGGVIGDMTGFAAACYQRGV
DFIQVPTTLLAQVDSSVGGKTGLNHPAGKNMIGAFHQPRAVIADTDTLVTLPQRELSAGM
AEVLKYGFIRDAAFLDWLECHMTELMSRDPEALAHAIWRSCEVKAQIVAEDEFESGSRAL
LNLGHTFGHAIEAGVGYGEWLHGEAVGAGICLAAVLSARLGWLTEAELKRTRRLIAGAGL
PTGRPAELSPERMLELMAVDKKVLAGQLRLVLLRQLGEAVVTSEFDRDELNHILA

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory