SitesBLAST
Comparing WP_012976370.1 NCBI__GCF_000010725.1:WP_012976370.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1t9dA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 8:564/596 of 1t9dA
- active site: Y29 (≠ V22), G31 (= G24), G32 (≠ D25), A33 (≠ T26), I34 (≠ N27), E55 (= E49), T78 (≠ P72), F117 (≠ L111), Q118 (≠ T112), E119 (= E113), K167 (≠ E161), R227 (≠ E225), M263 (≠ D260), V290 (vs. gap), V406 (≠ A402), L431 (≠ F428), G432 (= G429), M434 (≠ L431), D459 (= D456), N486 (= N483), E488 (≠ T485), Q489 (≠ F486), M491 (≠ W488), V492 (≠ I489), W495 (≠ L492), L517 (≠ I514), G522 (= G519), L523 (≠ V520), K556 (≠ S554)
- binding methyl 2-[({[(4-methoxy-6-methyl-1,3,5-triazin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: G32 (≠ D25), A33 (≠ T26), V107 (≠ I101), P108 (= P102), F117 (≠ L111), K167 (≠ E161), M263 (≠ D260), D288 (vs. gap), R289 (vs. gap), W495 (≠ L492)
- binding flavin-adenine dinucleotide: R157 (≠ K151), G216 (= G214), A217 (≠ G215), G218 (= G216), N221 (≠ R219), T243 (= T240), L244 (≠ M241), Q245 (≠ T242), M260 (≠ V257), L261 (≠ I258), H264 (≠ N261), G283 (= G281), A284 (≠ S282), R285 (≠ K283), D287 (vs. gap), R289 (vs. gap), V290 (vs. gap), E316 (≠ D307), V317 (≠ I308), N321 (≠ I312), G334 (= G325), D335 (= D326), A336 (= A327), Q410 (≠ T406), M411 (≠ P407), G429 (≠ R426), G430 (≠ A427)
- binding magnesium ion: D459 (= D456), N486 (= N483), E488 (≠ T485)
- binding 2,5-dimethyl-pyrimidin-4-ylamine: E55 (= E49), P81 (≠ A75), Q118 (≠ T112), G432 (= G429), M434 (≠ L431), M464 (= M461)
1t9aA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, tribenuron methyl (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 9:565/597 of 1t9aA
- active site: Y30 (≠ V22), G32 (= G24), G33 (≠ D25), A34 (≠ T26), I35 (≠ N27), E56 (= E49), T79 (≠ P72), F118 (≠ L111), Q119 (≠ T112), E120 (= E113), K168 (≠ E161), R228 (≠ E225), M264 (≠ D260), V291 (vs. gap), V407 (≠ A402), L432 (≠ F428), G433 (= G429), M435 (≠ L431), D460 (= D456), N487 (= N483), E489 (≠ T485), Q490 (≠ F486), M492 (≠ W488), V493 (≠ I489), W496 (≠ L492), L518 (≠ I514), G523 (= G519), L524 (≠ V520), K557 (≠ S554)
- binding methyl 2-[4-methoxy-6-methyl-1,3,5-trazin-2-yl(methyl)carbamoylsulfamoyl]benzoate: G33 (≠ D25), V108 (≠ I101), P109 (= P102), F118 (≠ L111), K168 (≠ E161), M264 (≠ D260), D289 (vs. gap), R290 (vs. gap), M492 (≠ W488), V493 (≠ I489), W496 (≠ L492)
- binding flavin-adenine dinucleotide: R158 (≠ K151), G217 (= G214), A218 (≠ G215), G219 (= G216), N222 (≠ R219), T244 (= T240), L245 (≠ M241), Q246 (≠ T242), L262 (≠ I258), M264 (≠ D260), H265 (≠ N261), G284 (= G281), A285 (≠ S282), R286 (≠ K283), D288 (vs. gap), R290 (vs. gap), V291 (vs. gap), E317 (≠ D307), V318 (≠ I308), N322 (≠ I312), G335 (= G325), D336 (= D326), A337 (= A327), Q411 (≠ T406), M412 (≠ P407), G430 (≠ R426), G431 (≠ A427)
- binding magnesium ion: D460 (= D456), N487 (= N483), E489 (≠ T485)
- binding propyl trihydrogen diphosphate: V407 (≠ A402), G408 (= G403), Q409 (≠ T404), H410 (≠ P405), M435 (≠ L431), G459 (= G455), D460 (= D456), A461 (≠ G457), S462 (= S458), N487 (= N483), E489 (≠ T485), Q490 (≠ F486), G491 (= G487), M492 (≠ W488)
- binding 5-{[ethyl(methyl)amino]methyl}-2-methyl-5,6-dihydropyrimidin-4-amine: G433 (= G429), M435 (≠ L431), M465 (= M461)
1t9cA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, sulfometuron methyl (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 8:564/596 of 1t9cA
- active site: Y29 (≠ V22), G31 (= G24), G32 (≠ D25), A33 (≠ T26), I34 (≠ N27), E55 (= E49), T78 (≠ P72), F117 (≠ L111), Q118 (≠ T112), E119 (= E113), K167 (≠ E161), R227 (≠ E225), M263 (≠ D260), V290 (vs. gap), V406 (≠ A402), L431 (≠ F428), G432 (= G429), M434 (≠ L431), D459 (= D456), N486 (= N483), E488 (≠ T485), Q489 (≠ F486), M491 (≠ W488), V492 (≠ I489), W495 (≠ L492), L517 (≠ I514), G522 (= G519), L523 (≠ V520), K556 (≠ S554)
- binding methyl 2-[({[(4,6-dimethylpyrimidin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: G32 (≠ D25), V107 (≠ I101), P108 (= P102), F117 (≠ L111), K167 (≠ E161), D288 (vs. gap), R289 (vs. gap), W495 (≠ L492)
- binding flavin-adenine dinucleotide: R157 (≠ K151), G216 (= G214), A217 (≠ G215), G218 (= G216), N221 (≠ R219), T243 (= T240), L244 (≠ M241), Q245 (≠ T242), L261 (≠ I258), M263 (≠ D260), H264 (≠ N261), G283 (= G281), A284 (≠ S282), R285 (≠ K283), D287 (vs. gap), R289 (vs. gap), V290 (vs. gap), E316 (≠ D307), V317 (≠ I308), N321 (≠ I312), G334 (= G325), D335 (= D326), A336 (= A327), M411 (≠ P407), G429 (≠ R426), G430 (≠ A427)
- binding magnesium ion: D459 (= D456), N486 (= N483), E488 (≠ T485)
5wkcA Saccharomyces cerevisiae acetohydroxyacid synthase in complex with the herbicide penoxsulam (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 8:559/591 of 5wkcA
- active site: Y29 (≠ V22), G31 (= G24), G32 (≠ D25), A33 (≠ T26), I34 (≠ N27), E55 (= E49), T78 (≠ P72), F117 (≠ L111), Q118 (≠ T112), E119 (= E113), K167 (≠ E161), R222 (≠ E225), M258 (≠ D260), V285 (vs. gap), V401 (≠ A402), L426 (≠ F428), G427 (= G429), M429 (≠ L431), D454 (= D456), N481 (= N483), E483 (≠ T485), Q484 (≠ F486), M486 (≠ W488), V487 (≠ I489), W490 (≠ L492), L512 (≠ I514), G517 (= G519), L518 (≠ V520), K551 (≠ S554)
- binding 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{S})-1-(dioxidanyl)-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate: V401 (≠ A402), G402 (= G403), Q403 (≠ T404), H404 (≠ P405), G427 (= G429), M429 (≠ L431), G453 (= G455), D454 (= D456), A455 (≠ G457), S456 (= S458), M459 (= M461), N481 (= N483), E483 (≠ T485), Q484 (≠ F486), G485 (= G487), M486 (≠ W488), V487 (≠ I489)
- binding ethaneperoxoic acid: G32 (≠ D25), Q118 (≠ T112)
- binding flavin-adenine dinucleotide: R157 (≠ K151), G211 (= G214), A212 (≠ G215), G213 (= G216), N216 (≠ R219), T238 (= T240), L239 (≠ M241), Q240 (≠ T242), L256 (≠ I258), M258 (≠ D260), G278 (= G281), A279 (≠ S282), R280 (≠ K283), R284 (vs. gap), V285 (vs. gap), E311 (≠ D307), V312 (≠ I308), N316 (≠ I312), D330 (= D326), A331 (= A327), M406 (≠ P407), G424 (≠ R426)
- binding magnesium ion: D454 (= D456), N481 (= N483), E483 (≠ T485)
- binding 2-(2,2-difluoroethoxy)-N-(5,8-dimethoxy[1,2,4]triazolo[1,5-c]pyrimidin-2-yl)-6-(trifluoromethyl)benzenesulfonamide: G32 (≠ D25), A33 (≠ T26), V107 (≠ I101), F117 (≠ L111), K167 (≠ E161), M258 (≠ D260), R284 (vs. gap), M486 (≠ W488), W490 (≠ L492)
- binding (3z)-4-{[(4-amino-2-methylpyrimidin-5-yl)methyl]amino}-3-mercaptopent-3-en-1-yl trihydrogen diphosphate: P30 (= P23), E55 (= E49)
1t9bB Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 8:563/595 of 1t9bB
- active site: Y29 (≠ V22), G31 (= G24), G32 (≠ D25), A33 (≠ T26), I34 (≠ N27), E55 (= E49), T78 (≠ P72), F117 (≠ L111), Q118 (≠ T112), E119 (= E113), K167 (≠ E161), R226 (≠ E225), M262 (≠ D260), V289 (vs. gap), V405 (≠ A402), L430 (≠ F428), G431 (= G429), M433 (≠ L431), D458 (= D456), N485 (= N483), E487 (≠ T485), Q488 (≠ F486), M490 (≠ W488), V491 (≠ I489), W494 (≠ L492), L516 (≠ I514), G521 (= G519), L522 (≠ V520), K555 (≠ S554)
- binding 1-(2-chlorophenylsulfonyl)-3-(4-methoxy-6-methyl-l,3,5-triazin-2-yl)urea: V107 (≠ I101), P108 (= P102), D287 (vs. gap), R288 (vs. gap), M490 (≠ W488), W494 (≠ L492)
- binding flavin-adenine dinucleotide: R157 (≠ K151), G215 (= G214), A216 (≠ G215), G217 (= G216), N220 (≠ R219), T242 (= T240), L243 (≠ M241), Q244 (≠ T242), M259 (≠ V257), L260 (≠ I258), M262 (≠ D260), H263 (≠ N261), G282 (= G281), A283 (≠ S282), R284 (≠ K283), D286 (vs. gap), R288 (vs. gap), V289 (vs. gap), E315 (≠ D307), V316 (≠ I308), N320 (≠ I312), G333 (= G325), D334 (= D326), A335 (= A327), Q409 (≠ T406), M410 (≠ P407), G428 (≠ R426), G429 (≠ A427)
- binding magnesium ion: D458 (= D456), N485 (= N483), E487 (≠ T485)
1n0hA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorimuron ethyl (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 10:567/599 of 1n0hA
- active site: Y31 (≠ V22), G33 (= G24), G34 (≠ D25), A35 (≠ T26), I36 (≠ N27), E57 (= E49), T80 (≠ P72), F119 (≠ L111), Q120 (≠ T112), E121 (= E113), K169 (≠ E161), R230 (≠ E225), M266 (≠ D260), V293 (vs. gap), V409 (≠ A402), L434 (≠ F428), G435 (= G429), M437 (≠ L431), D462 (= D456), N489 (= N483), E491 (≠ T485), Q492 (≠ F486), M494 (≠ W488), V495 (≠ I489), W498 (≠ L492), L520 (≠ I514), G525 (= G519), L526 (≠ V520), K559 (≠ S554)
- binding 4-{[(4'-amino-2'-methylpyrimidin-5'-yl)methyl]amino}pent-3-enyl diphosphate: V409 (≠ A402), G410 (= G403), Q411 (≠ T404), H412 (≠ P405), G435 (= G429), M437 (≠ L431), G461 (= G455), D462 (= D456), A463 (≠ G457), S464 (= S458), M467 (= M461), N489 (= N483), E491 (≠ T485), Q492 (≠ F486), G493 (= G487), V495 (≠ I489)
- binding 2-[[[[(4-chloro-6-methoxy-2-pyrimidinyl)amino]carbonyl]amino]sulfonyl]benzoic acid ethyl ester: G34 (≠ D25), A35 (≠ T26), V109 (≠ I101), P110 (= P102), F119 (≠ L111), K169 (≠ E161), M266 (≠ D260), D291 (vs. gap), R292 (vs. gap), V495 (≠ I489), W498 (≠ L492)
- binding flavin-adenine dinucleotide: R159 (≠ K151), G219 (= G214), A220 (≠ G215), G221 (= G216), N224 (≠ R219), T246 (= T240), L247 (≠ M241), Q248 (≠ T242), L264 (≠ I258), G265 (= G259), M266 (≠ D260), H267 (≠ N261), G286 (= G281), A287 (≠ S282), R288 (≠ K283), D290 (vs. gap), R292 (vs. gap), V293 (vs. gap), E319 (≠ D307), V320 (≠ I308), N324 (≠ I312), G337 (= G325), D338 (= D326), A339 (= A327), M414 (≠ P407), G432 (≠ R426), G433 (≠ A427)
- binding magnesium ion: D462 (= D456), N489 (= N483), E491 (≠ T485)
- binding thiamine diphosphate: Y31 (≠ V22), E57 (= E49), P83 (≠ A75)
8beoB Crystal structure of e. Coli glyoxylate carboligase mutant i393a with map
28% identity, 87% coverage: 1:506/584 of query aligns to 3:495/592 of 8beoB
- binding methyl hydrogen (s)-acetylphosphonate: C490 (= C501), Q492 (≠ S503)
- binding flavin-adenine dinucleotide: R153 (≠ K151), P154 (= P152), G210 (= G214), G211 (= G215), G212 (= G216), N215 (≠ R219), T236 (= T240), L237 (≠ M241), M238 (≠ T242), V254 (≠ I258), G255 (= G259), Q257 (≠ N261), T258 (≠ G262), G277 (= G281), N278 (≠ S282), R279 (≠ K283), A281 (≠ G285), R283 (≠ V287), H284 (≠ V288), D301 (= D307), I302 (= I308), Q306 (≠ I312), D320 (= D326), A321 (= A327), G415 (≠ P425)
- binding magnesium ion: D445 (= D456), F450 (≠ M461), L451 (≠ A462), E453 (≠ G464), N472 (= N483), Y474 (≠ T485)
- binding 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(1s)-1-hydroxy-1-[(r)-hydroxy(methoxy)phosphoryl]ethyl}-5-(2-{[(s)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium: R283 (≠ V287), G393 (= G403), L394 (≠ T404), S395 (≠ P405), L420 (= L431), G444 (= G455), D445 (= D456), F446 (≠ G457), D447 (≠ S458), N472 (= N483), Y474 (≠ T485), L475 (≠ F486), G476 (= G487), L477 (≠ W488), I478 (= I489)
- binding 2,3-dimethoxy-5-methyl-1,4-benzoquinone: Q352 (≠ N355), R356 (≠ A359)
Sites not aligning to the query:
8beoA Crystal structure of e. Coli glyoxylate carboligase mutant i393a with map
28% identity, 87% coverage: 1:506/584 of query aligns to 3:495/592 of 8beoA
- binding flavin-adenine dinucleotide: R153 (≠ K151), P154 (= P152), G210 (= G214), G211 (= G215), G212 (= G216), N215 (≠ R219), T236 (= T240), L237 (≠ M241), M238 (≠ T242), V254 (≠ I258), G255 (= G259), Q257 (≠ N261), T258 (≠ G262), G277 (= G281), N278 (≠ S282), R279 (≠ K283), A281 (≠ G285), R283 (≠ V287), H284 (≠ V288), D301 (= D307), I302 (= I308), Q306 (≠ I312), D320 (= D326), A321 (= A327), I397 (≠ P407), G415 (≠ P425)
- binding magnesium ion: R384 (≠ K394), V405 (≠ L415), F406 (≠ K416), H410 (≠ T420), D445 (= D456), F450 (≠ M461), L451 (≠ A462), E453 (≠ G464), N472 (= N483), Y474 (≠ T485)
- binding 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(1s)-1-hydroxy-1-[(r)-hydroxy(methoxy)phosphoryl]ethyl}-5-(2-{[(s)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium: R283 (≠ V287), G393 (= G403), L394 (≠ T404), S395 (≠ P405), L420 (= L431), G444 (= G455), D445 (= D456), F446 (≠ G457), D447 (≠ S458), N472 (= N483), Y474 (≠ T485), L475 (≠ F486), G476 (= G487), L477 (≠ W488), I478 (= I489)
- binding 2,3-dimethoxy-5-methyl-1,4-benzoquinone: E248 (≠ R252), Q352 (≠ N355)
Sites not aligning to the query:
6u9dB Saccharomyces cerevisiae acetohydroxyacid synthase (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 12:575/607 of 6u9dB
- active site: Y33 (≠ V22), G35 (= G24), G36 (≠ D25), A37 (≠ T26), I38 (≠ N27), E59 (= E49), T82 (≠ P72), F121 (≠ L111), Q122 (≠ T112), E123 (= E113), K171 (≠ E161), M274 (≠ D260), V301 (vs. gap), V417 (≠ A402), G443 (= G429), M445 (≠ L431), D470 (= D456), N497 (= N483), E499 (≠ T485), Q500 (≠ F486), M502 (≠ W488), V503 (≠ I489), W506 (≠ L492)
- binding methyl 2-[(4,6-dimethoxypyrimidin-2-yl)carbamoylsulfamoylmethyl]benzoate: G36 (≠ D25), V111 (≠ I101), P112 (= P102), F121 (≠ L111), K171 (≠ E161), D299 (vs. gap), R300 (vs. gap), M502 (≠ W488), W506 (≠ L492)
- binding flavin-adenine dinucleotide: R161 (≠ K151), A228 (≠ G215), G229 (= G216), N232 (≠ R219), T254 (= T240), L255 (≠ M241), Q256 (≠ T242), L272 (≠ I258), M274 (≠ D260), G294 (= G281), R296 (≠ K283), D298 (vs. gap), R300 (vs. gap), V301 (vs. gap), E327 (≠ D307), V328 (≠ I308), N332 (≠ I312), D346 (= D326), A347 (= A327), M422 (≠ P407), G440 (≠ R426), G441 (≠ A427)
- binding magnesium ion: D470 (= D456), N497 (= N483)
- binding thiamine diphosphate: E59 (= E49), P85 (≠ A75), V417 (≠ A402), G418 (= G403), Q419 (≠ T404), H420 (≠ P405), G443 (= G429), M445 (≠ L431), A471 (≠ G457), S472 (= S458), N497 (= N483), E499 (≠ T485), Q500 (≠ F486), G501 (= G487), M502 (≠ W488), V503 (≠ I489)
P07342 Acetolactate synthase catalytic subunit, mitochondrial; Acetohydroxy-acid synthase catalytic subunit; AHAS; ALS; EC 2.2.1.6 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 92:655/687 of P07342
- R241 (≠ K151) binding FAD
- 355:376 (vs. 261:283, 35% identical) binding FAD
- 407:426 (vs. 307:326, 20% identical) binding FAD
6bd3A Saccharomyces cerevisiae acetohydroxyacid synthase
26% identity, 95% coverage: 1:553/584 of query aligns to 10:536/538 of 6bd3A
- active site: Y31 (≠ V22), G33 (= G24), G34 (≠ D25), A35 (≠ T26), I36 (≠ N27), E57 (= E49), T80 (≠ P72), F119 (≠ L111), Q120 (≠ T112), E121 (= E113), K169 (≠ E161), R225 (≠ E225), M261 (≠ D260), V288 (vs. gap), V404 (≠ A402), L429 (≠ F428), G430 (= G429), M432 (≠ L431), D457 (= D456), N484 (= N483), L498 (≠ I514), G503 (= G519), L504 (≠ V520)
- binding flavin-adenine dinucleotide: R159 (≠ K151), G214 (= G214), A215 (≠ G215), G216 (= G216), N219 (≠ R219), T241 (= T240), L242 (≠ M241), Q243 (≠ T242), L259 (≠ I258), G260 (= G259), H262 (≠ N261), G281 (= G281), A282 (≠ S282), R283 (≠ K283), D285 (vs. gap), R287 (vs. gap), V288 (vs. gap), E314 (≠ D307), V315 (≠ I308), D333 (= D326), A334 (= A327)
- binding 2-acetyl-thiamine diphosphate: P32 (= P23), E57 (= E49), P83 (≠ A75)
- binding magnesium ion: D457 (= D456), N484 (= N483)
- binding oxygen molecule: A35 (≠ T26), T80 (≠ P72), S81 (= S73), Q120 (≠ T112)
- binding thiamine diphosphate: V404 (≠ A402), G405 (= G403), Q406 (≠ T404), H407 (≠ P405), G430 (= G429), M432 (≠ L431), D457 (= D456), A458 (≠ G457), S459 (= S458), M462 (= M461), N484 (= N483)
Sites not aligning to the query:
1t9dB Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, metsulfuron methyl (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 7:550/582 of 1t9dB
- active site: Y28 (≠ V22), G30 (= G24), G31 (≠ D25), A32 (≠ T26), I33 (≠ N27), E54 (= E49), T77 (≠ P72), F116 (≠ L111), Q117 (≠ T112), E118 (= E113), K166 (≠ E161), R213 (≠ E225), M249 (≠ D260), V276 (vs. gap), V392 (≠ A402), L417 (≠ F428), G418 (= G429), M420 (≠ L431), D445 (= D456), N472 (= N483), E474 (≠ T485), Q475 (≠ F486), M477 (≠ W488), V478 (≠ I489), W481 (≠ L492), L503 (≠ I514), G508 (= G519), L509 (≠ V520), K542 (≠ S554)
- binding methyl 2-[({[(4-methoxy-6-methyl-1,3,5-triazin-2-yl)amino]carbonyl}amino)sulfonyl]benzoate: G31 (≠ D25), A32 (≠ T26), V106 (≠ I101), P107 (= P102), F116 (≠ L111), K166 (≠ E161), M249 (≠ D260), D274 (vs. gap), R275 (vs. gap), W481 (≠ L492)
- binding flavin-adenine dinucleotide: R156 (≠ K151), G202 (= G214), A203 (≠ G215), G204 (= G216), N207 (≠ R219), T229 (= T240), L230 (≠ M241), Q231 (≠ T242), L247 (≠ I258), M249 (≠ D260), H250 (≠ N261), G269 (= G281), A270 (≠ S282), R271 (≠ K283), D273 (vs. gap), R275 (vs. gap), V276 (vs. gap), E302 (≠ D307), V303 (≠ I308), N307 (≠ I312), G320 (= G325), D321 (= D326), A322 (= A327), Q396 (≠ T406), M397 (≠ P407), G415 (≠ R426), G416 (≠ A427)
- binding magnesium ion: D445 (= D456), N472 (= N483), E474 (≠ T485)
- binding 2,5-dimethyl-pyrimidin-4-ylamine: E54 (= E49), P80 (≠ A75), G418 (= G429), M420 (≠ L431), M450 (= M461)
1t9bA Crystal structure of yeast acetohydroxyacid synthase in complex with a sulfonylurea herbicide, chlorsulfuron (see paper)
25% identity, 96% coverage: 1:562/584 of query aligns to 8:551/583 of 1t9bA
- active site: Y29 (≠ V22), G31 (= G24), G32 (≠ D25), A33 (≠ T26), I34 (≠ N27), E55 (= E49), T78 (≠ P72), F117 (≠ L111), Q118 (≠ T112), E119 (= E113), K167 (≠ E161), R214 (≠ E225), M250 (≠ D260), V277 (vs. gap), V393 (≠ A402), L418 (≠ F428), G419 (= G429), M421 (≠ L431), D446 (= D456), N473 (= N483), E475 (≠ T485), Q476 (≠ F486), M478 (≠ W488), V479 (≠ I489), W482 (≠ L492), L504 (≠ I514), G509 (= G519), L510 (≠ V520), K543 (≠ S554)
- binding 1-(2-chlorophenylsulfonyl)-3-(4-methoxy-6-methyl-l,3,5-triazin-2-yl)urea: V107 (≠ I101), P108 (= P102), F117 (≠ L111), D275 (vs. gap), R276 (vs. gap), M478 (≠ W488), W482 (≠ L492)
- binding flavin-adenine dinucleotide: R157 (≠ K151), G203 (= G214), A204 (≠ G215), G205 (= G216), N208 (≠ R219), T230 (= T240), L231 (≠ M241), Q232 (≠ T242), M247 (≠ V257), L248 (≠ I258), M250 (≠ D260), H251 (≠ N261), G270 (= G281), A271 (≠ S282), R272 (≠ K283), D274 (vs. gap), R276 (vs. gap), V277 (vs. gap), E303 (≠ D307), V304 (≠ I308), N308 (≠ I312), D322 (= D326), A323 (= A327), Q397 (≠ T406), M398 (≠ P407), G416 (≠ R426), G417 (≠ A427)
- binding magnesium ion: D446 (= D456), N473 (= N483), E475 (≠ T485)
8i01A Crystal structure of escherichia coli glyoxylate carboligase (see paper)
28% identity, 87% coverage: 1:506/584 of query aligns to 5:497/594 of 8i01A
- binding flavin-adenine dinucleotide: R155 (≠ K151), G212 (= G214), G213 (= G215), G214 (= G216), N217 (≠ R219), T238 (= T240), L239 (≠ M241), M240 (≠ T242), V256 (≠ I258), G257 (= G259), Q259 (≠ N261), T260 (≠ G262), G279 (= G281), N280 (≠ S282), R281 (≠ K283), A283 (≠ G285), R285 (≠ V287), H286 (≠ V288), D303 (= D307), I304 (= I308), Q308 (≠ I312), D322 (= D326), A323 (= A327), G417 (≠ P425)
- binding magnesium ion: D447 (= D456), F452 (≠ M461), E455 (≠ G464), N474 (= N483), Y476 (≠ T485)
- binding thiamine diphosphate: G395 (= G403), L396 (≠ T404), S397 (≠ P405), L422 (= L431), G446 (= G455), D447 (= D456), F448 (≠ G457), D449 (≠ S458), N474 (= N483), Y476 (≠ T485), L477 (≠ F486), G478 (= G487), L479 (≠ W488), I480 (= I489)
- binding 2,3-dimethoxy-5-methyl-1,4-benzoquinone: Q354 (≠ N355), C492 (= C501), Q494 (≠ S503)
Sites not aligning to the query:
5imsA Saccharomyces cerevisiae acetohydroxyacid synthase
26% identity, 95% coverage: 1:553/584 of query aligns to 10:540/541 of 5imsA
- active site: Y31 (≠ V22), G33 (= G24), G34 (≠ D25), A35 (≠ T26), I36 (≠ N27), E57 (= E49), T80 (≠ P72), F119 (≠ L111), Q120 (≠ T112), E121 (= E113), K169 (≠ E161), R229 (≠ E225), M265 (≠ D260), V292 (vs. gap), V408 (≠ A402), L433 (≠ F428), G434 (= G429), M436 (≠ L431), D461 (= D456), N488 (= N483), E490 (≠ G497), L502 (≠ I514), G507 (= G519), L508 (≠ V520)
- binding flavin-adenine dinucleotide: R159 (≠ K151), G218 (= G214), A219 (≠ G215), G220 (= G216), N223 (≠ R219), T245 (= T240), L246 (≠ M241), L263 (≠ I258), G264 (= G259), H266 (≠ N261), G285 (= G281), A286 (≠ S282), R287 (≠ K283), D289 (vs. gap), R291 (vs. gap), V292 (vs. gap), E318 (≠ D307), V319 (≠ I308), N323 (≠ I312), D337 (= D326), A338 (= A327)
- binding magnesium ion: D461 (= D456), N488 (= N483)
- binding oxygen molecule: G34 (≠ D25), T80 (≠ P72), Q120 (≠ T112)
- binding thiamine diphosphate: P32 (= P23), E57 (= E49), V408 (≠ A402), G409 (= G403), Q410 (≠ T404), H411 (≠ P405), G434 (= G429), M436 (≠ L431), G460 (= G455), D461 (= D456), A462 (≠ G457), S463 (= S458), M466 (= M461), N488 (= N483)
Sites not aligning to the query:
1jscA Crystal structure of the catalytic subunit of yeast acetohydroxyacid synthase: a target for herbicidal inhibitors (see paper)
26% identity, 95% coverage: 1:553/584 of query aligns to 10:539/541 of 1jscA
- active site: Y31 (≠ V22), G33 (= G24), G34 (≠ D25), A35 (≠ T26), I36 (≠ N27), E57 (= E49), T80 (≠ P72), F119 (≠ L111), Q120 (≠ T112), E121 (= E113), K169 (≠ E161), M263 (≠ D260), V290 (vs. gap), V406 (≠ A402), G432 (= G429), M434 (≠ L431), D459 (= D456), N486 (= N483), E488 (≠ R496)
- binding dihydrogenphosphate ion: G33 (= G24), G34 (≠ D25), Q120 (≠ T112)
- binding flavin-adenine dinucleotide: R159 (≠ K151), G216 (= G214), A217 (≠ G215), G218 (= G216), N221 (≠ R219), T243 (= T240), L244 (≠ M241), L261 (≠ I258), G262 (= G259), H264 (≠ N261), G283 (= G281), A284 (≠ S282), R285 (≠ K283), D287 (vs. gap), R289 (vs. gap), V290 (vs. gap), E316 (≠ D307), V317 (≠ I308), N321 (≠ I312), G334 (= G325), D335 (= D326), A336 (= A327)
- binding magnesium ion: D459 (= D456), N486 (= N483)
- binding thiamine diphosphate: Y31 (≠ V22), P32 (= P23), E57 (= E49), P83 (≠ A75), V406 (≠ A402), G407 (= G403), Q408 (≠ T404), H409 (≠ P405), M434 (≠ L431), D459 (= D456), A460 (≠ G457), S461 (= S458), N486 (= N483)
Sites not aligning to the query:
6bd9A Saccharomyces cerevisiae acetohydroxyacid synthase
26% identity, 95% coverage: 1:553/584 of query aligns to 10:540/542 of 6bd9A
- active site: Y31 (≠ V22), G33 (= G24), G34 (≠ D25), A35 (≠ T26), I36 (≠ N27), E57 (= E49), T80 (≠ P72), F119 (≠ L111), Q120 (≠ T112), E121 (= E113), K169 (≠ E161), R228 (≠ E225), M264 (≠ D260), V291 (vs. gap), V407 (≠ A402), L432 (≠ F428), G433 (= G429), M435 (≠ L431), D460 (= D456), N487 (= N483), E489 (≠ R496), L502 (≠ I514), G507 (= G519), L508 (≠ V520)
- binding flavin-adenine dinucleotide: R159 (≠ K151), G217 (= G214), A218 (≠ G215), G219 (= G216), N222 (≠ R219), T244 (= T240), L245 (≠ M241), L262 (≠ I258), G263 (= G259), H265 (≠ N261), G284 (= G281), A285 (≠ S282), R286 (≠ K283), D288 (vs. gap), R290 (vs. gap), V291 (vs. gap), E317 (≠ D307), V318 (≠ I308), N322 (≠ I312), G335 (= G325), D336 (= D326), A337 (= A327)
- binding magnesium ion: D460 (= D456), N487 (= N483)
- binding oxygen molecule: G34 (≠ D25), T80 (≠ P72), Q120 (≠ T112), A461 (≠ G457), Q494 (≠ C501)
- binding pyruvic acid: G33 (= G24), G34 (≠ D25), G34 (≠ D25), A35 (≠ T26), Q120 (≠ T112)
- binding thiamine diphosphate: P32 (= P23), E57 (= E49), V407 (≠ A402), G408 (= G403), Q409 (≠ T404), H410 (≠ P405), G433 (= G429), M435 (≠ L431), G459 (= G455), D460 (= D456), A461 (≠ G457), S462 (= S458), M465 (= M461), N487 (= N483)
Sites not aligning to the query:
6lpiB Crystal structure of ahas holo-enzyme (see paper)
28% identity, 96% coverage: 3:561/584 of query aligns to 8:531/539 of 6lpiB
- active site: I27 (≠ V22), G29 (= G24), G30 (≠ D25), S31 (≠ T26), I32 (≠ N27), E53 (= E49), C76 (≠ P72), F115 (≠ L111), Q116 (≠ T112), E117 (= E113), K165 (≠ E161), M256 (≠ D260), A283 (≠ T289), V375 (≠ A402), G401 (= G429), M403 (≠ L431), D428 (= D456), N455 (= N483), A457 (≠ T485), L458 (≠ F486), L460 (≠ W488), V461 (≠ I489), Q464 (≠ L492)
- binding flavin-adenine dinucleotide: R155 (≠ K151), G212 (= G214), G213 (= G215), G214 (= G216), T236 (= T240), L237 (≠ M241), M238 (≠ T242), L254 (≠ I258), M256 (≠ D260), H257 (≠ N261), G276 (= G281), A277 (≠ S282), R278 (≠ K283), D280 (≠ G285), R282 (≠ V288), A283 (≠ T289), D300 (= D307), I301 (= I308), D319 (= D326), V320 (≠ A327), M380 (≠ P407), G398 (≠ R426)
- binding magnesium ion: D428 (= D456), N455 (= N483)
- binding thiamine diphosphate: E53 (= E49), C76 (≠ P72), P79 (≠ A75), G376 (= G403), Q377 (≠ T404), H378 (≠ P405), G401 (= G429), M403 (≠ L431), G427 (= G455), D428 (= D456), G429 (= G457), S430 (= S458), M433 (= M461), N455 (= N483), A457 (≠ T485), L458 (≠ F486), G459 (= G487), L460 (≠ W488), V461 (≠ I489)
8i07D Crystal structure of escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde (see paper)
28% identity, 87% coverage: 1:506/584 of query aligns to 5:497/594 of 8i07D
- binding 2-oxidanylethanal: R285 (≠ V287), I480 (= I489)
- binding flavin-adenine dinucleotide: R155 (≠ K151), P156 (= P152), G212 (= G214), G213 (= G215), G214 (= G216), N217 (≠ R219), T238 (= T240), L239 (≠ M241), M240 (≠ T242), V256 (≠ I258), G257 (= G259), Q259 (≠ N261), T260 (≠ G262), G279 (= G281), N280 (≠ S282), R281 (≠ K283), R285 (≠ V287), H286 (≠ V288), D303 (= D307), I304 (= I308), Q308 (≠ I312), D322 (= D326), A323 (= A327), I399 (≠ P407), G417 (≠ P425)
- binding magnesium ion: D447 (= D456), F452 (≠ M461), L453 (≠ A462), E455 (≠ G464), N474 (= N483), Y476 (≠ T485)
- binding thiamine diphosphate: V52 (≠ E49), T76 (≠ P72), G395 (= G403), L396 (≠ T404), S397 (≠ P405), L422 (= L431), G446 (= G455), D447 (= D456), F448 (≠ G457), D449 (≠ S458), N474 (= N483), Y476 (≠ T485), L477 (≠ F486), G478 (= G487), L479 (≠ W488), I480 (= I489)
- binding ubiquinone-1: Q354 (≠ N355), R358 (≠ A359), C492 (= C501), Q494 (≠ S503)
Sites not aligning to the query:
8i07A Crystal structure of escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde (see paper)
28% identity, 87% coverage: 1:506/584 of query aligns to 5:497/594 of 8i07A
- binding flavin-adenine dinucleotide: R155 (≠ K151), P156 (= P152), G212 (= G214), G213 (= G215), G214 (= G216), N217 (≠ R219), T238 (= T240), L239 (≠ M241), M240 (≠ T242), V256 (≠ I258), G257 (= G259), Q259 (≠ N261), T260 (≠ G262), G279 (= G281), N280 (≠ S282), R281 (≠ K283), R285 (≠ V287), H286 (≠ V288), D303 (= D307), I304 (= I308), Q308 (≠ I312), D322 (= D326), A323 (= A327), I394 (≠ A402), I399 (≠ P407), G417 (≠ P425)
- binding magnesium ion: D447 (= D456), F452 (≠ M461), L453 (≠ A462), E455 (≠ G464), N474 (= N483), Y476 (≠ T485)
- binding thiamine diphosphate: I394 (≠ A402), G395 (= G403), L396 (≠ T404), S397 (≠ P405), L422 (= L431), G446 (= G455), D447 (= D456), F448 (≠ G457), D449 (≠ S458), N474 (= N483), Y476 (≠ T485), L477 (≠ F486), G478 (= G487), L479 (≠ W488), I480 (= I489)
- binding ubiquinone-1: Q354 (≠ N355), C492 (= C501), Q494 (≠ S503)
Sites not aligning to the query:
Query Sequence
>WP_012976370.1 NCBI__GCF_000010725.1:WP_012976370.1
MRGADILVEMLIAYGVDVVFGVPGDTNVPFYEALQEREGRIRHVMARDERSAGYMADAYG
RFTSKPAVFECPSGAGAMYSLPPVAESNASSVPVILLTIDIPLPGEGRGVLTELDCARLF
EPITKMSVQVKSAEKLPEILRRAFRVACSGKPGAVHLQIPEDMLRAEVDPARVSLHVEEE
CASFPAFPTLPTPDTLHRLMALLSASERPLIVSGGGVNRSCAGPEVTALAERLNIPVCTT
MTGQGTMPDDHRLAVGVIGDNGFHPHANWALEHADFVLFVGSKMGSVVTIGWTFPKITLN
KRVAQIDIDPEIMANNYENVLSVPGDAKLTLAQLIDLAPADHDRGKTQPWVDELNGLRAE
FWRNAEPLLNSDSLPLRPERVVRCFNEALEAHGKPAHIYSDAGTPTPYMTRFLKLKDRRT
RFAIPRAFGGLGSALPATVGAWFADKERRPIGMFGDGSFGMAVGELETLVRLQVPAILLL
FNNGTFGWIKGLHRLRGHNQCFSVDFMPPQGQAIAEAFGVRAWTARTSVELDKALAEAFA
YDSGPCLIDIHVESIADRVPPVYSWLSKRGRDPLAVESEEVRYA
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory