Comparing WP_012977092.1 NCBI__GCF_000010725.1:WP_012977092.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3l0qA The crystal structure of xlylulose kinase from yersinia pseudotuberculosis
57% identity, 99% coverage: 5:544/547 of query aligns to 4:541/541 of 3l0qA
3qdkA Structural insight on mechanism and diverse substrate selection strategy of ribulokinase (see paper)
28% identity, 97% coverage: 3:534/547 of query aligns to 1:529/546 of 3qdkA
3h3nX Glycerol kinase h232r with glycerol (see paper)
22% identity, 93% coverage: 5:513/547 of query aligns to 6:472/501 of 3h3nX
O34153 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus casseliflavus (Enterococcus flavescens) (see 3 papers)
22% identity, 93% coverage: 5:513/547 of query aligns to 7:473/506 of O34153
6k76A Glycerol kinase form thermococcus kodakarensis, complex structure with substrate.
25% identity, 93% coverage: 5:513/547 of query aligns to 1:456/485 of 6k76A
5ya1A Crystal structure of lsrk-hpr complex with atp (see paper)
24% identity, 95% coverage: 5:525/547 of query aligns to 5:476/478 of 5ya1A
5ya2A Crystal structure of lsrk-hpr complex with adp (see paper)
24% identity, 95% coverage: 5:525/547 of query aligns to 5:476/478 of 5ya2A
O86033 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
27% identity, 35% coverage: 5:198/547 of query aligns to 5:200/497 of O86033
Sites not aligning to the query:
P09099 Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli (strain K12) (see paper)
22% identity, 85% coverage: 6:470/547 of query aligns to 3:414/484 of P09099
O34154 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Enterococcus faecalis (strain ATCC 700802 / V583) (see 2 papers)
31% identity, 25% coverage: 378:513/547 of query aligns to 340:472/501 of O34154
Sites not aligning to the query:
3ge1A 2.7 angstrom crystal structure of glycerol kinase (glpk) from staphylococcus aureus in complex with adp and glycerol
23% identity, 37% coverage: 1:204/547 of query aligns to 2:207/499 of 3ge1A
Sites not aligning to the query:
Q5HGD2 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Staphylococcus aureus (strain COL)
23% identity, 37% coverage: 1:204/547 of query aligns to 1:206/498 of Q5HGD2
Sites not aligning to the query:
2itmA Crystal structure of the e. Coli xylulose kinase complexed with xylulose (see paper)
25% identity, 43% coverage: 6:242/547 of query aligns to 3:222/476 of 2itmA
Sites not aligning to the query:
P18157 Glycerol kinase; ATP:glycerol 3-phosphotransferase; Glycerokinase; GK; EC 2.7.1.30 from Bacillus subtilis (strain 168) (see paper)
27% identity, 24% coverage: 380:513/547 of query aligns to 341:471/496 of P18157
Sites not aligning to the query:
3ll3A The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
21% identity, 91% coverage: 3:500/547 of query aligns to 3:450/492 of 3ll3A
3ll3B The crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus
21% identity, 91% coverage: 3:500/547 of query aligns to 2:448/490 of 3ll3B
1gllO Escherichia coli glycerol kinase mutant with bound atp analog showing substantial domain motion (see paper)
22% identity, 45% coverage: 3:250/547 of query aligns to 3:259/494 of 1gllO
Sites not aligning to the query:
1gljO Escherichia coli glycerol kinase mutant with bound atp analog showing substantial domain motion (see paper)
22% identity, 45% coverage: 3:250/547 of query aligns to 3:259/494 of 1gljO
Sites not aligning to the query:
1bwfO Escherichia coli glycerol kinase mutant with bound atp analog showing substantial domain motion (see paper)
22% identity, 45% coverage: 3:250/547 of query aligns to 3:259/494 of 1bwfO
Sites not aligning to the query:
6udeB Crystal structure of glycerol kinase from elizabethkingia anophelis nuhp1 in complex with adp and glycerol
24% identity, 31% coverage: 3:173/547 of query aligns to 3:173/495 of 6udeB
Sites not aligning to the query:
>WP_012977092.1 NCBI__GCF_000010725.1:WP_012977092.1
MTRAVIGVDVGTGSARAGIFDLAGHRLAAASRPIRMWKPDPEWAEQSSDDIWAAVCAAVR
EALAACAETPEVVGIGFDATCSLVVLDAAGRPVTVDPEGDDSRNVIVWMDHRAIDQTGRI
NAGGHEVLRYVGGRLSPEMQTPKLLWLKETLPRSWSRAAHFLDLPDFLTWRATGSARRSL
CSLVCKWTYLGHEGRWDDGYLRAIGLGDLVVEGHVRIGTEVGAVGSAIAGGLSTEAAREL
GLTPGIAVGTSMIDAHAGGIGVIGATVSAGEPIDFDRRLALIGGTSSCHMVMSPAAAPRF
IPGVWGPYHSAMLPGLWLNEGGQSATGALIDHVVRSHPRHAELVTEARRHDTTIYQLLNE
ELARLAERSGVPMALLTRELHVLPDFHGNRSPRADASLRGAISGLRLSDGLEDLALLYLA
TVQAVAYGTRHIVAAMNGRGYAIDTILACGGGTRNPVFLKAHADATGCTLVLPEEPQAVL
LGAAMLGAVAGGAFPDIAAVMAGMSRAGRRIEPAGGALRAYHDAKYAVFLRLHEDQMAYR
GLMEQAG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory