Comparing WP_012977722.1 NCBI__GCF_000010725.1:WP_012977722.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
4wjiA Crystal structure of cyclohexadienyl dehydrogenase from sinorhizobium meliloti in complex with NADP and tyrosine
57% identity, 97% coverage: 9:299/300 of query aligns to 1:291/293 of 4wjiA
3gggD The crystal structure of a. Aeolicus prephenate dehydrogenase in complex with tyrosine and NAD+ (see paper)
37% identity, 94% coverage: 14:294/300 of query aligns to 15:293/293 of 3gggD
3ggpA Crystal structure of prephenate dehydrogenase from a. Aeolicus in complex with hydroxyphenyl propionate and NAD+ (see paper)
37% identity, 94% coverage: 14:294/300 of query aligns to 7:285/286 of 3ggpA
3ggoA Crystal structure of prephenate dehydrogenase from a. Aeolicus with hpp and nadh (see paper)
37% identity, 94% coverage: 14:294/300 of query aligns to 7:285/285 of 3ggoA
5uyyA Crystal structure of prephenate dehydrogenase tyra from bacillus anthracis in complex with l-tyrosine (see paper)
32% identity, 93% coverage: 14:291/300 of query aligns to 11:287/373 of 5uyyA
Sites not aligning to the query:
6u60B Crystal structure of prephenate dehydrogenase tyra from bacillus anthracis in complex with NAD and l-tyrosine (see paper)
32% identity, 93% coverage: 14:291/300 of query aligns to 3:279/365 of 6u60B
Sites not aligning to the query:
3b1fA Crystal structure of prephenate dehydrogenase from streptococcus mutans (see paper)
33% identity, 93% coverage: 15:294/300 of query aligns to 9:285/286 of 3b1fA
2f1kA Crystal structure of synechocystis arogenate dehydrogenase (see paper)
31% identity, 85% coverage: 14:268/300 of query aligns to 2:251/279 of 2f1kA
>WP_012977722.1 NCBI__GCF_000010725.1:WP_012977722.1
MPSATNDTAPLFDRVAIVGIGLIGSSLARALTEYGIARRVVCADRSGDACTKALELGIVA
EATTDLAAALAGADLVVLATPVGSFASVGEAIGPLLRPGTIVTDVGSVKQAVLRDVGPHL
AEGVHLIPGHPVAGTEHSGPEAGFATLFQGRWCILTPPPGADDGALERVTELWRRVGSTV
EIMEANHHDRVLAITSHLPHLIAYTIVGTASDLEEDTKSEVIKFSAGGFRDFTRIAASDP
VMWRDIFLNNREAVLEILQRFTEDLTALQRSIRWGEGEHLQDHFTKTRAVRRGIIDAKQA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory