Comparing WP_013010833.1 NCBI__GCF_000025725.1:WP_013010833.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
1j32A Aspartate aminotransferase from phormidium lapideum
30% identity, 88% coverage: 9:388/430 of query aligns to 1:371/388 of 1j32A
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
30% identity, 87% coverage: 11:384/430 of query aligns to 4:364/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
30% identity, 87% coverage: 11:384/430 of query aligns to 4:364/382 of 1bjwA
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
30% identity, 87% coverage: 10:384/430 of query aligns to 3:364/385 of Q56232
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
33% identity, 81% coverage: 38:384/430 of query aligns to 25:364/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
33% identity, 81% coverage: 38:384/430 of query aligns to 25:364/388 of 1gd9A
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
30% identity, 87% coverage: 11:384/430 of query aligns to 4:364/382 of 1b5oA
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
29% identity, 87% coverage: 11:384/430 of query aligns to 4:364/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
29% identity, 87% coverage: 11:384/430 of query aligns to 4:364/382 of 1gc3A
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
28% identity, 82% coverage: 21:372/430 of query aligns to 13:368/399 of 6f77A
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
28% identity, 82% coverage: 21:372/430 of query aligns to 14:369/400 of Q02635
Sites not aligning to the query:
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
29% identity, 83% coverage: 14:372/430 of query aligns to 17:379/410 of P58350
6f35A Crystal structure of the aspartate aminotranferase from rhizobium meliloti (see paper)
29% identity, 83% coverage: 14:372/430 of query aligns to 7:369/400 of 6f35A
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
31% identity, 87% coverage: 10:384/430 of query aligns to 1:378/399 of 5wmhA
5wmlA Arabidopsis thaliana prephenate aminotransferase mutant- k306a (see paper)
30% identity, 87% coverage: 9:384/430 of query aligns to 1:379/404 of 5wmlA
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
29% identity, 85% coverage: 18:384/430 of query aligns to 17:364/384 of 1o4sB
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
30% identity, 87% coverage: 9:384/430 of query aligns to 1:378/402 of 5wmiA
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
25% identity, 87% coverage: 9:384/430 of query aligns to 5:377/402 of P14909
Sites not aligning to the query:
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
27% identity, 88% coverage: 8:384/430 of query aligns to 2:372/391 of 8wkjA
4cvqA Crystal structure of an aminotransferase from escherichia coli at 2. 11 angstroem resolution (see paper)
28% identity, 80% coverage: 30:374/430 of query aligns to 25:372/404 of 4cvqA
>WP_013010833.1 NCBI__GCF_000025725.1:WP_013010833.1
MSDYGKPDINLNLNVRGLPLSATLAINELSNSLRQQGKKVYKLGLGQSPFPVPQSVVNEL
KNNAYQKDYLPVRGLPVLQTAVAEYYQKTQGLTFKANNILIGPGSKELMFLIQLVYYGDL
VIPTPSWVSYAPQAHIVGHQVHWLNTLEENEWLLMPEELEALCKEDPNKPRLVILNYPNN
PTGGTYTLEQLQELAEVARRYKVVMLSDEIYGETNHEGNHVSIAKFYPEGTVISSGLSKW
CGAGGWRLGTFAFPDSLEWLLNSMASVASETFTSTSAPIQYAAVRAFKFGIDIERYLWNS
RKILRQLGRLMHEILTDAGVRCAYPKGGFYMFPNFENYRESLKAKQITTSDQFCQRLLND
VGVAVLPGTAFGRPAGELTARLSYVDFDGARALSALETKPSDYEPDDDFIRQHCGENIIA
MEKTVEWLKS
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory