SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_013076727.1 NCBI__GCF_000092905.1:WP_013076727.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

3al0C Crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. (see paper)
32% identity, 96% coverage: 2:93/96 of query aligns to 1:92/564 of 3al0C

query
sites
3al0C
K
 
K
I
 
V
S
 
T
L
 
K
E
 
D
Q
 
L
V
 
V
E
 
L
H
 
H
V
 
L
A
 
E
R
 
N
L
 
L
A
 
A
R
 
R
L
 
L
A
 
E
L
 
L
T
 
S
E
 
E
R
 
D
E
 
Q
A
 
R
E
 
E
I
 
S
Y
 
L
A
 
M
E
 
K
Q
 
D
L
 
F
G
 
Q
A
 
E
I
 
I
L
 
L
A
 
D
F
 
Y
A
 
V
D
 
E
Q
 
L
L
 
L
Q
 
N
E
 
E
L
 
V
D
 
D
V
 
V
S
 
E
D
 
G
V
 
V
P
 
E
P
 
P
T
 
M
S
 
Y
H
 
T
V
 
P
L
 
V
P
 
E
I
 
D
S
 
S
N
 
A
V
 
K
L
 
L
R
 
R
E
 
K
D
 
G
E
 
D
Q
 
P
R
 
R
P
 
F
G
 
F
L
 
E
S
 
M
R
 
R
E
 
D
A
 
L
A
 
I
L
 
K
A
 
K
G
 
N
A
 
F
P
 
P
D
 
E
Q
 
E
E
 
K
D
 
D
G
 
G
Q
 
H
F
 
I
R
 
K
V
 
V
P
 
P
A
 
G
I
 
I

Sites not aligning to the query:

Query Sequence

>WP_013076727.1 NCBI__GCF_000092905.1:WP_013076727.1
MKISLEQVEHVARLARLALTEREAEIYAEQLGAILAFADQLQELDVSDVPPTSHVLPISN
VLREDEQRPGLSREAALAGAPDQEDGQFRVPAILEG

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory