SitesBLAST
Comparing WP_013403911.1 NCBI__GCF_000166355.1:WP_013403911.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1a0cA Xylose isomerase from thermoanaerobacterium thermosulfurigenes
79% identity, 99% coverage: 2:436/438 of query aligns to 2:436/437 of 1a0cA
- active site: H100 (= H100), D103 (= D103), W138 (= W138), E231 (= E231), K233 (= K233), E267 (= E267), H270 (= H270), D295 (= D295), D306 (= D306), D308 (= D308), D338 (= D338)
- binding cobalt (ii) ion: E231 (= E231), E267 (= E267), E267 (= E267), H270 (= H270), D295 (= D295), D306 (= D306), D308 (= D308), D338 (= D338)
1a0eA Xylose isomerase from thermotoga neapolitana
73% identity, 99% coverage: 2:435/438 of query aligns to 2:435/443 of 1a0eA
- active site: H100 (= H100), D103 (= D103), W138 (= W138), E231 (= E231), K233 (= K233), E267 (= E267), H270 (= H270), D295 (= D295), D306 (= D306), D308 (= D308), D338 (= D338)
- binding cobalt (ii) ion: E231 (= E231), E267 (= E267), E267 (= E267), H270 (= H270), D295 (= D295), D308 (= D308), D338 (= D338)
1a0dA Xylose isomerase from bacillus stearothermophilus
71% identity, 99% coverage: 3:436/438 of query aligns to 2:434/437 of 1a0dA
- active site: H98 (= H100), D101 (= D103), W136 (= W138), E229 (= E231), K231 (= K233), E265 (= E267), H268 (= H270), D293 (= D295), D304 (= D306), D306 (= D308), D336 (= D338)
- binding manganese (ii) ion: E229 (= E231), E265 (= E267), E265 (= E267), H268 (= H270), D293 (= D295), D304 (= D306), D306 (= D308), D336 (= D338)
6intA Xylose isomerase from paenibacillus sp. R4 (see paper)
64% identity, 99% coverage: 3:436/438 of query aligns to 1:411/413 of 6intA
- active site: H74 (= H100), D77 (= D103), W112 (= W138), E205 (= E231), K207 (= K233), E241 (= E267), H244 (= H270), D269 (= D295), D280 (= D306), D282 (= D308), D313 (= D338)
- binding calcium ion: G166 (= G192), E178 (= E204), E205 (= E231), E241 (= E267), E241 (= E267), H244 (= H270), D269 (= D295), D280 (= D306), D282 (= D308), D313 (= D338)
P00944 Xylose isomerase; D-xylulose keto-isomerase; EC 5.3.1.5 from Escherichia coli (strain K12) (see paper)
53% identity, 99% coverage: 3:436/438 of query aligns to 4:438/440 of P00944
- H101 (= H100) active site
5yn3A Crystal structure of xylose isomerase from piromyces sp. E2 (see paper)
51% identity, 99% coverage: 2:434/438 of query aligns to 2:434/435 of 5yn3A
- active site: H100 (= H100), D103 (= D103), W138 (= W138), E231 (= E231), K233 (= K233), E267 (= E267), H270 (= H270), D295 (= D295), D306 (= D306), D308 (= D308), D338 (= D338)
- binding glycerol: H100 (= H100), W187 (= W187), E231 (= E231), D295 (= D295)
- binding manganese (ii) ion: E231 (= E231), E267 (= E267), E267 (= E267), H270 (= H270), D295 (= D295), D306 (= D306), D308 (= D308), D338 (= D338)
5nhcA Crystal structure of xylose isomerase from piromyces e2 in complex with two co2+ ions and xylulose (see paper)
51% identity, 99% coverage: 2:434/438 of query aligns to 3:435/436 of 5nhcA
- active site: H101 (= H100), D104 (= D103), W139 (= W138), E232 (= E231), K234 (= K233), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding cobalt (ii) ion: E232 (= E231), E268 (= E267), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding 4-hydroxyproline: G290 (≠ N289), L292 (= L291), G328 (≠ M327), G330 (= G329), V332 (≠ D331)
- binding d-xylulose: W49 (= W48), H101 (= H100), W188 (= W187), E232 (= E231), E268 (= E267), H271 (= H270), D339 (= D338)
5nhaA Crystal structure of xylose isomerase from piromyces sp. E2 in complex with two mn2+ ions and sorbitol (see paper)
51% identity, 99% coverage: 2:434/438 of query aligns to 3:435/436 of 5nhaA
- active site: H101 (= H100), D104 (= D103), W139 (= W138), E232 (= E231), K234 (= K233), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding manganese (ii) ion: E232 (= E231), E268 (= E267), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding sorbitol: W49 (= W48), H101 (= H100), W188 (= W187), E232 (= E231), D339 (= D338)
5nh9A Crystal structure of xylose isomerase from piromyces e2 in complex with two mn2+ ions and xylose (see paper)
51% identity, 99% coverage: 2:434/438 of query aligns to 3:435/436 of 5nh9A
- active site: H101 (= H100), D104 (= D103), W139 (= W138), E232 (= E231), K234 (= K233), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding manganese (ii) ion: E232 (= E231), E268 (= E267), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding D-xylose: W49 (= W48), H101 (= H100), W188 (= W187), E232 (= E231), E268 (= E267), H271 (= H270), D339 (= D338)
- binding beta-D-xylopyranose: G63 (≠ P62), K65 (≠ I64), S66 (≠ V65), K203 (≠ E202), K206 (≠ L205), H257 (≠ Y256), D288 (≠ I287), A289 (≠ N288)
5nh7A Crystal structure of xylose isomerase from piromyces e2 in complex with two mg2+ ions and xylose (see paper)
51% identity, 99% coverage: 2:434/438 of query aligns to 3:435/436 of 5nh7A
- active site: H101 (= H100), D104 (= D103), W139 (= W138), E232 (= E231), K234 (= K233), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding magnesium ion: E232 (= E231), E268 (= E267), E268 (= E267), H271 (= H270), D296 (= D295), D307 (= D306), D309 (= D308), D339 (= D338)
- binding D-xylose: W49 (= W48), H101 (= H100), W188 (= W187), E232 (= E231), E268 (= E267), H271 (= H270), D339 (= D338)
- binding beta-D-xylopyranose: G63 (≠ P62), K65 (≠ I64), S66 (≠ V65)
- binding alpha-D-xylopyranose: P21 (= P20), D40 (= D39), Y97 (≠ F96), K136 (= K135), E350 (= E349)
5nh6A Crystal structure of xylose isomerase from piromyces e2 complexed with one mg2+ ion and xylitol (see paper)
51% identity, 99% coverage: 2:434/438 of query aligns to 3:435/436 of 5nh6A