Comparing WP_013419693.1 NCBI__GCF_000166055.1:WP_013419693.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
6io1B Crystal structure of a novel thermostable (s)-enantioselective omega- transaminase from thermomicrobium roseum (see paper)
48% identity, 96% coverage: 9:444/453 of query aligns to 4:439/448 of 6io1B
6fyqA The crystal structure of a new transaminase from the marine bacterium virgibacillus (see paper)
44% identity, 96% coverage: 12:447/453 of query aligns to 2:438/443 of 6fyqA
6g4dB Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp (see paper)
42% identity, 94% coverage: 15:438/453 of query aligns to 5:436/453 of 6g4dB
6g4fA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with pmp (see paper)
42% identity, 94% coverage: 15:438/453 of query aligns to 5:436/451 of 6g4fA
6g4eA Crystal structure of the omega transaminase from pseudomonas jessenii in complex with plp and 6-aminohexanoate (6-aca) (see paper)
42% identity, 94% coverage: 15:438/453 of query aligns to 5:436/451 of 6g4eA
6gwiB The crystal structure of halomonas elongata amino-transferase (see paper)
41% identity, 96% coverage: 17:449/453 of query aligns to 10:447/450 of 6gwiB
5kr6B Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
41% identity, 96% coverage: 14:447/453 of query aligns to 10:456/460 of 5kr6B
7qx3A Structure of the transaminase tr2e2 with eos (see paper)
41% identity, 89% coverage: 36:438/453 of query aligns to 3:408/422 of 7qx3A
6s54A Transaminase from pseudomonas fluorescens (see paper)
38% identity, 96% coverage: 8:440/453 of query aligns to 2:444/453 of 6s54A
5kr5A Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
40% identity, 96% coverage: 14:447/453 of query aligns to 6:452/455 of 5kr5A
7qx0B Transaminase structure of plurienzyme (tr2e2) in complex with plp (see paper)
39% identity, 95% coverage: 9:438/453 of query aligns to 1:429/443 of 7qx0B
8wqjA Crystal structure of transaminase from shimia marina
39% identity, 94% coverage: 27:453/453 of query aligns to 22:456/472 of 8wqjA
5kr3A Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
39% identity, 96% coverage: 15:447/453 of query aligns to 10:453/458 of 5kr3A
5ti8B Crystal structure of an aspartate aminotransferase from pseudomonas (see paper)
42% identity, 89% coverage: 36:436/453 of query aligns to 2:368/384 of 5ti8B
3gjuA Crystal structure of a putative aminotransferase (mll7127) from mesorhizobium loti maff303099 at 1.55 a resolution
39% identity, 98% coverage: 4:447/453 of query aligns to 3:456/458 of 3gjuA
7ypmA Crystal structure of transaminase cc1012 complexed with plp and l- alanine (see paper)
39% identity, 96% coverage: 15:449/453 of query aligns to 5:452/454 of 7ypmA
5kquC Directed evolution of transaminases by ancestral reconstruction. Using old proteins for new chemistries
39% identity, 96% coverage: 15:447/453 of query aligns to 9:454/459 of 5kquC
6s4gA Crystal structure of the omega transaminase from chromobacterium violaceum in complex with pmp (see paper)
39% identity, 98% coverage: 9:453/453 of query aligns to 1:450/453 of 6s4gA
7q9xAAA Probable aminotransferase
39% identity, 98% coverage: 9:453/453 of query aligns to 2:451/455 of 7q9xAAA
4a6tC Crystal structure of the omega transaminase from chromobacterium violaceum in complex with plp (see paper)
39% identity, 98% coverage: 9:453/453 of query aligns to 2:451/455 of 4a6tC
>WP_013419693.1 NCBI__GCF_000166055.1:WP_013419693.1
MSDIKRPTTAAAWVEADRLHLLHPQHHPSEQQNPIIWSRGEGATLYDTEGRAYLDGLSGM
WNVHLGHGRWELVEAASRQLSTLAFATAYAGATHEPAIRLAERLKKIAPAGIESFFFTTS
GSEATDTSIRTARWFWRAQGKPAKTKIIAREWSYHGSTIGAASATGVDEFSEGFGPRLPG
FLHIPSPYPYRFDGDGEAAADLLEAAILREGPETVAAFIAEPVQGGGGGVIVPPDGYFER
IREICDSHDVLFIADEVITGFGRTGKWFALEHWGIAPDIVQFAKGITSGYVPLGGIGISA
RIKDVLDGAESDRRWWHGFTASAHPVACAVALETLRIIDEERLVERAAGQGGALLGRLRE
ALGWHPHVGEVRGLGLLAGVELVADRRTRARFAPEFRIASKLRAELLARGLYTRIVNDTI
CLAPPLTTTDTDLSRIADIVIDAVETVCRPTKS
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory