Comparing WP_013429333.1 NCBI__GCF_000166775.1:WP_013429333.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1wzaA Crystal structure of alpha-amylase from h.Orenii (see paper)
47% identity, 92% coverage: 42:513/514 of query aligns to 7:485/488 of 1wzaA
7jjnA Eubacterium rectale amy13b (eur_01860)
36% identity, 92% coverage: 43:513/514 of query aligns to 26:509/514 of 7jjnA
5m99A Functional characterization and crystal structure of thermostable amylase from thermotoga petrophila, reveals high thermostability and an archaic form of dimerization (see paper)
39% identity, 82% coverage: 41:464/514 of query aligns to 7:453/506 of 5m99A
1lwjA Crystal structure of t. Maritima 4-alpha-glucanotransferase/acarbose complex (see paper)
37% identity, 84% coverage: 40:470/514 of query aligns to 1:426/441 of 1lwjA
1lwhA Crystal structure of t. Maritima 4-alpha-glucanotransferase (see paper)
37% identity, 84% coverage: 40:470/514 of query aligns to 1:426/441 of 1lwhA
7jjtA Ruminococcus bromii amylase amy5 (rbr_07800)
37% identity, 92% coverage: 42:513/514 of query aligns to 21:509/513 of 7jjtA
9fz2A Alpha-amylase (see paper)
37% identity, 92% coverage: 42:513/514 of query aligns to 21:509/512 of 9fz2A
6y9tA Family gh13_31 enzyme (see paper)
32% identity, 93% coverage: 38:513/514 of query aligns to 6:533/536 of 6y9tA
5x7uA Trehalose synthase from thermobaculum terrenum (see paper)
32% identity, 88% coverage: 37:487/514 of query aligns to 6:515/546 of 5x7uA
Sites not aligning to the query:
5ykbD The n253f mutant structure of trehalose synthase from deinococcus radiodurans reveals an open active-site conformation (see paper)
30% identity, 91% coverage: 41:510/514 of query aligns to 8:517/523 of 5ykbD
2ze0A Alpha-glucosidase gsj (see paper)
30% identity, 91% coverage: 41:509/514 of query aligns to 9:523/531 of 2ze0A
4lxfB Crystal structure of m. Tuberculosis tres (see paper)
33% identity, 80% coverage: 41:452/514 of query aligns to 37:478/546 of 4lxfB
3zoaA The structure of trehalose synthase (tres) of mycobacterium smegmatis in complex with acarbose (see paper)
32% identity, 85% coverage: 41:476/514 of query aligns to 11:505/548 of 3zoaA
Sites not aligning to the query:
3zo9A The structure of trehalose synthase (tres) of mycobacterium smegmatis (see paper)
32% identity, 85% coverage: 41:476/514 of query aligns to 12:506/549 of 3zo9A
A0R6E0 Trehalose synthase/amylase TreS; Maltose alpha-D-glucosyltransferase; MTase; EC 3.2.1.1; EC 5.4.99.16 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see 2 papers)
33% identity, 81% coverage: 41:458/514 of query aligns to 40:516/593 of A0R6E0
9ezlA Crystal structure of trehalose synthase mutant n253h from deinococcus radiodurans (see paper)
29% identity, 91% coverage: 41:510/514 of query aligns to 8:541/548 of 9ezlA
5jy7B Complex of mycobacterium smegmatis trehalose synthase with maltokinase (see paper)
33% identity, 81% coverage: 41:458/514 of query aligns to 24:500/571 of 5jy7B
3zoaB The structure of trehalose synthase (tres) of mycobacterium smegmatis in complex with acarbose (see paper)
33% identity, 81% coverage: 41:458/514 of query aligns to 24:500/571 of 3zoaB
Sites not aligning to the query:
8z2tA Crystal structure of trehalose synthase from deinococcus radiodurans complexed with validoxylamine a (vaa) (see paper)
29% identity, 91% coverage: 41:510/514 of query aligns to 8:541/548 of 8z2tA
8uzhB Sumo fused trehalose synthase (tres) of mycobacterium tuberculosis (see paper)
31% identity, 80% coverage: 41:452/514 of query aligns to 88:558/626 of 8uzhB
>WP_013429333.1 NCBI__GCF_000166775.1:WP_013429333.1
MKRILRYILIFAIVFLIGLSSFLAGLSNSQSPVQTKKDGLIFYEVFVRSFYDSNGDGIGD
INGLAEKLPYIKSLGVNAIWLMPIFESPSYHGYDVTNYYKVNPDYGTNEDFVNFIKKAHK
MGIKVIIDMMINHTSSKHPWFIEASSNKNSKYRNYYIWATPNTNLDEPSELGTRQWYKKG
DSYYNAIFWSEMPDLNFDNKAVREEMKKIAKFWLEKGVDGFRLDAAKHIYPLSREKDTLV
WWEEYAKFCRSIKKDVYLVAEVWDSLQRIAQYAKIFDSCFNFIIAQNIIEGVIYENTQTL
QNNLSSIYNLYKNVNPQFVDAPFLTNHDMNRAYTEIGSNSKMKLAAALLLTLPGNPFIYY
GEEIGMKGQKPDEYIREPFKWYETWKKGQTNWEMSLYNSGPDVASVEKQEKDKNSLLNFY
RDMISFRKKNLPLLKGDFQLIKTSFDILSFARVYNNQKMVVIFNFTGKELSKTINLPSNI
NITGKTVKGSGKILSLKNGKLSFSIKPYSFIIIN
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory