SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_013443867.1 NCBI__GCF_000183135.1:WP_013443867.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

4h15A Crystal structure of a short chain alcohol dehydrogenase-related dehydrogenase (target id nysgrc-011812) from sinorhizobium meliloti 1021 in space group p21
52% identity, 98% coverage: 4:261/262 of query aligns to 4:260/261 of 4h15A

query
sites
4h15A

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active site: S139 (= S140), Y153 (= Y154), K157 (= K158), L198 (≠ I199)
binding calcium ion: A98 (= A99), D103 (= D104)

4h16A Crystal structure of a short chain alcohol dehydrogenase-related dehydrogenase (target id nysgrc-011812) from sinorhizobium meliloti 1021 in space group p6422
52% identity, 96% coverage: 10:261/262 of query aligns to 6:257/258 of 4h16A

query
sites
4h16A

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active site: S136 (= S140), Y150 (= Y154), K154 (= K158), L195 (≠ I199)
binding magnesium ion: A95 (= A99), D100 (= D104)

3ai2A The crystal structure of l-sorbose reductase from gluconobacter frateurii complexed with NADPH (see paper)
34% identity, 97% coverage: 10:262/262 of query aligns to 5:263/263 of 3ai2A

query
sites
3ai2A

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active site: G18 (= G23), S144 (= S140), Y157 (= Y154), K161 (= K158)
binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G14 (= G19), S16 (≠ T21), S17 (≠ K22), G18 (= G23), I19 (≠ A24), A38 (= A43), R39 (= R44), Q40 (≠ N45), V64 (≠ A58), D65 (= D59), V66 (≠ L60), N92 (= N86), G94 (= G88), N142 (≠ I138), Y157 (= Y154), K161 (= K158), P187 (= P184), I190 (= I187), T192 (= T189), W195 (≠ A192)

3ai3C The crystal structure of l-sorbose reductase from gluconobacter frateurii complexed with NADPH and l-sorbose (see paper)
34% identity, 97% coverage: 10:262/262 of query aligns to 5:263/263 of 3ai3C

query
sites
3ai3C

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active site: G18 (= G23), S144 (= S140), Y157 (= Y154), K161 (= K158)
binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G14 (= G19), S16 (≠ T21), S17 (≠ K22), G18 (= G23), I19 (≠ A24), A38 (= A43), R39 (= R44), Q40 (≠ N45), R43 (≠ E48), D65 (= D59), V66 (≠ L60), N92 (= N86), G94 (= G88), N142 (≠ I138), Y157 (= Y154), K161 (= K158), P187 (= P184), G188 (= G185), I190 (= I187), T192 (= T189), W195 (≠ A192)
binding alpha-L-sorbopyranose: A252 (≠ E251), F254 (≠ V253), L263 (≠ I262)
binding L-sorbose: G96 (= G89), E154 (≠ S150), Y157 (= Y154), W195 (≠ A192)

3ai3A The crystal structure of l-sorbose reductase from gluconobacter frateurii complexed with NADPH and l-sorbose (see paper)
34% identity, 97% coverage: 10:262/262 of query aligns to 5:263/263 of 3ai3A

query
sites
3ai3A

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C

G

A

K

V

L

Q

P

P

L
|
L

Y

W

E

Y

S
x
E

T

P

L

I

P

-

Y
|
Y

A

N

A

V

A

T

K
|
K

A

A

G

A

L

L

I

M

N

M

Y

F

S

S

K

K

A

T

L

L

S

A

N

T

E

E

V

V

S

I

P

K

K

D

G

N

V

I

R

R

V

V

L

N

T

C

V

I

S

N

P
|
P

G
|
G

W

L

I
|
I

M

L

T
|
T

T

P

S

D

A
x
W

I

I

K

K

M

T

M

A

E

K

R

E

I

L

A

T

E

K

S

D

S

N

N

G

S

G

T

D

I

W

E

K

Q

G

A

Y

T

L

Q

Q

S

S

V

V

M

A

D

D

A

E

L

H

G

A

G

-

I

-

P

P

Y

I

G

K

R

R

P

F

A

A

K

S

P

P

E

E

V

L

A

A

E

N

L

F

V

F

G

V

F

F

L

L

V

C

S

S

P

E

R

R

A

A

G

T

Y

Y

L

S

T

V

G

G

T

S

E

A

Y

Y

V

F

I

V

D

D

G

G

T

M

I

L

P

K

T

T

I

L

active site: G18 (= G23), S144 (= S140), Y157 (= Y154), K161 (= K158)
binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G14 (= G19), S16 (≠ T21), S17 (≠ K22), G18 (= G23), I19 (≠ A24), A38 (= A43), R39 (= R44), Q40 (≠ N45), R43 (≠ E48), V64 (≠ A58), D65 (= D59), V66 (≠ L60), N92 (= N86), G94 (= G88), N142 (≠ I138), S144 (= S140), Y157 (= Y154), K161 (= K158), P187 (= P184), G188 (= G185), I190 (= I187), T192 (= T189), W195 (≠ A192)
binding L-sorbose: G96 (= G89), S144 (= S140), L151 (= L147), E154 (≠ S150), Y157 (= Y154), G188 (= G185)

5vt6A Crystal structure of acetoacetyl-coa reductase from burkholderia pseudomallei 1710b complexed with NADP
33% identity, 94% coverage: 13:257/262 of query aligns to 2:241/245 of 5vt6A

query
sites
5vt6A

K

R

I

V

A

A

L

F

V

V

T

T

G
|
G

G

G

T

M

K
x
G

G
|
G

A
x
L

G

G

K

A

A

A

I

I

A

S

Q

R

R

R

L

L

L

H

D

D

A

A

G

G

A

M

T

A

V

V

I

A

I

V

T

S

A
x
H

-
x
S

-

E

R

R

N
|
N

-

D

-

H

-

V

-

S

-

T

-

W

-

L

V

M

P

H

E

E

E

R

N

D

K

A

Q

G

L

R

H

D

F

F

-

K

-

A

I

Y

S

A

A
x
V

D
|
D

L
x
V

S

A

K

D

P

F

E

E

G

S

T

C

Q

E

K

R

V

C

V

A

D

E

E

K

I

V

L

L

G

A

K

D

F

F

G

G

R

K

L

V

D

D

I

V

L

L

V

I

N

N

N
|
N

L
x
A

G
|
G

G

-

S

-

E
x
I

T

T

S

R

G

D

G

A

G

T

F

F

R

M

A

K

L

M

T

T

D

K

Q

G

D
|
D

W

W

E

D

T

A

T

V

I

M

Q

R

T

T

N

D

L

L

I

D

A

A

P

M

V

F

R

N

L

V

D

T

R

K

G

Q

F

F

L

I

P

A

Q

G

M

M

I

V

E

E

Q

R

K

R

N

F

G

G

V

R

I

I

I

V

H

N

I
|
I

A

G

S
|
S

I

V

Q

N

G

G

K

S

L

R

P

G

L

A

Y

F

E

G

S

Q

T

A

L

-

P

N

Y
|
Y

A

A

A

S

A

A

K
|
K

A

A

G

G

L

I

I

H

N

G

Y

F

S

T

K

K

A

T

L

L

S

A

N

L

E

E

V

T

S

A

P

K

K

R

G

G

V

I

R

T

V

V

L

N

T

T

V

V

S

S

P
|
P

G

G

W
x
Y

I
x
L

M

A

T
|
T

T

-

S

-

A

-

I

-

K

-

M

-

E

-

R

-

I

-

A

-

E

-

S

-

N

-

S

A

T

M

I

V

E

E

Q

A

A

V

T

P

Q

Q

S

D

V

V

M

L

D

E

A

A

-

K

-

I

L

L

G

P

G

Q

I

I

P

P

Y

V

G

G

R

R

P

L

A

G

K

R

P

P

E

D

E

E

V

V

A

A

E

A

L

L

V

I

G

A

F

F

L

L

V

C

S

S

P

D

R

D

A

A

G

G

Y

F

L

V

T

T

G

G

T

A

E

D

Y

L

V

A

I

I

D

N

G

G

active site: G12 (= G23), D102 (= D104), S138 (= S140), Y151 (= Y154), K155 (= K158)
binding nadp nicotinamide-adenine-dinucleotide phosphate: G8 (= G19), G11 (≠ K22), G12 (= G23), L13 (≠ A24), H32 (≠ A43), S33 (vs. gap), N36 (= N45), V58 (≠ A58), D59 (= D59), V60 (≠ L60), N86 (= N86), A87 (≠ L87), G88 (= G88), I89 (≠ E91), I136 (= I138), Y151 (= Y154), K155 (= K158), P181 (= P184), Y183 (≠ W186), L184 (≠ I187), T186 (= T189)

3op4A Crystal structure of putative 3-ketoacyl-(acyl-carrier-protein) reductase from vibrio cholerae o1 biovar eltor str. N16961 in complex with NADP+ (see paper)
35% identity, 95% coverage: 10:257/262 of query aligns to 6:243/247 of 3op4A

query
sites
3op4A

L

L

S

E

N

G

K

K

I

V

A

A

L

L

V

V

T

T

G
|
G

G

A

T
x
S

K
x
R

G

G

A
x
I

G

G

K

K

A

A

I

I

A

A

Q

E

R

L

L

L

L

A

D

E

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A

A

R
x
T

N

S

V

E

P

S

E

G

E

A

N

Q

K

A

Q

I

L

S

H

D

F

Y

I

L

-

G

-

D

-

N

-

G

-

K

-

G

-

M

S

A

A

L

D
x
N

L
x
V

S

T

K

N

P

P

E

E

G

S

T

I

Q

E

K

A

V

V

V

L

D

K

E

A

I

I

L

T

G

D

K

E

F

F

G

G

R

G

L

V

D

D

I

I

L

L

V

V

N

N

N
|
N

L
x
A

G

G

G

-

S

-

E
x
I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

E

Q

E

D

E

W

W

E

S

T

D

T

I

I

M

Q

E

T

T

N

N

L

L

I

T

A

S

P

I

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

L

P

R

Q

G

M

M

I

M

E

K

Q

K

K

R

N

Q

G

G

V

R

I

I

H

N

I
x
V

A

G

S
|
S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

A

S

G

T

Q

L

A

P

N

Y
|
Y

A

A

K
|
K

A

A

G

G

L

V

I

I

N

G

Y

F

S

T

K

K

A

S

L

M

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

V

R

T

V

V

L

N

T

T

V

V

S

A

P
|
P

G
|
G

W

F

I
|
I

M

E

T
|
T

-

D

-
x
M

T

T

S

K

A

A

I

L

K

N

M

D

M

E

E

Q

R

R

I

T

A

A

E

-

S

-

N

-

S

-

T

-

I

-

E

-

Q

-

A

-

T

-

Q

-

S

-

V

-

M

-

D

-

A

T

L

L

G

A

G

Q

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

D

P

P

E

R

E

E

V

I

A

A

E

S

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

P

R

E

A

A

G

A

Y

Y

L

I

T

T

G

G

T

E

E

T

Y

L

V

H

I

V

D

N

G

G

binding nadp nicotinamide-adenine-dinucleotide phosphate: G15 (= G19), S17 (≠ T21), R18 (≠ K22), I20 (≠ A24), T40 (≠ R44), N62 (≠ D59), V63 (≠ L60), N89 (= N86), A90 (≠ L87), I92 (≠ E91), V139 (≠ I138), S141 (= S140), Y154 (= Y154), K158 (= K158), P184 (= P184), G185 (= G185), I187 (= I187), T189 (= T189), M191 (vs. gap)

4k6fB X-ray crystal structure of a putative acetoacetyl-coa reductase from burkholderia cenocepacia bound to the co-factor NADP
36% identity, 94% coverage: 13:257/262 of query aligns to 2:241/245 of 4k6fB

query
sites
4k6fB

K

R

I

I

A

A

L

V

V

V

T

T

G
|
G

G

G

T

M

K

G

G
|
G

A

L

G

G

K

E

A

A

I

V

A

S

Q

I

R

R

L

L

L

N

D

D

A

A

G

G

A

H

T

R

V

V

I

V

T

T

A
x
Y

-
x
S

-

P

-

N

-
x
N

-

T

-

G

-

A

-

D

R

R

N

W

V

L

P

T

E

E

E

M

N

H

-

A

-

G

K

R

Q

E

L

F

H

H

F

A

I

Y

S

P

A
x
V

D
|
D

L
x
V

S

A

K

D

P

H

E

D

G

S

T

C

Q

Q

K

Q

V

C

V

I

D

E

E

K

I

I

L

V

G

R

K

D

F

V

G

G

R

P

L

V

D

D

I

I

L

L

V

V

N

N

L
x
A

G
|
G

G

-

S

-

E
x
I

T

T

S

R

G

D

G

M

G

T

F

L

R

R

A

K

L

L

T

D

D

K

Q

V

D
x
N

W

W

E

D

T

A

T

V

I

I

Q

R

T

T

N

N

L

L

I

D

A

S

P

V

V

F

R

N

L

M

D

T

R

K

G

P

F

V

L

C

P

D

Q

G

M

M

I

V

E

E

Q

R

K

G

N

W

G

G

V

R

I

I

I

V

H

N

I

I

A

S

S
|
S

I

V

Q

N

G

G

K

S

L

K

P

G

L

S

Y

V

E

G

S

Q

T

T

L

-

P

N

Y
|
Y

A

A

K
|
K

A

A

G

G

L

M

I

H

N

G

Y

F

S

T

K

K

A

S

L

L

S

A

N

L

E

E

V

I

S

A

P

R

K

K

G

G

V

V

R

T

V

V

L

N

T

T

V

V

S

S

P

P

G

G

W

Y

I

L

M

A

T

T

T

-

S

-

A

-

I

-

K

K

M

M

M

V

E

T

R

A

I

I

A

P

E

-

S

-

N

-

S

-

T

-

I

-

E

-

Q

-

A

-

T

-

Q

Q

S

D

V

I

M

L

D

D

A

T

-

K

-

I

L

L

G

P

G

Q

I

I

P

P

Y

A

G

G

R

R

P

L

A

G

K

K

P

P

E

E

V

V

A

A

E

A

L

L

V

V

G

A

F

Y

L

L

V

C

S

S

P

E

R

E

A

A

G

G

Y

F

L

V

T

T

G

G

T

S

E

N

Y

I

V

A

I

I

D

N

G

G

active site: G12 (= G23), N102 (≠ D104), S138 (= S140), Y151 (= Y154), K155 (= K158)
binding nadp nicotinamide-adenine-dinucleotide phosphate: G8 (= G19), Y32 (≠ A43), S33 (vs. gap), N36 (vs. gap), V58 (≠ A58), D59 (= D59), V60 (≠ L60), A87 (≠ L87), G88 (= G88), I89 (≠ E91)

4i08A Crystal structure of beta-ketoacyl-acyl carrier protein reductase (fabg) from vibrio cholerae in complex with NADPH (see paper)
35% identity, 95% coverage: 10:257/262 of query aligns to 6:239/243 of 4i08A

query
sites
4i08A

L

L

S

E

N

G

K

K

I

V

A

A

L

L

V

V

T

T

G
|
G

G

A

T
x
S

K
x
R

G
|
G

A
x
I

G

G

K

K

A

A

I

I

A

A

Q

E

R

L

L

L

L

A

D

E

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A

A

R
x
T

N

S

V

E

P

S

E

G

E

A

N

Q

K

A

Q

I

L

S

H

D

F

Y

I

L

-

G

-

D

-

N

-

G

-

K

-

G

-

M

S

A

A

L

D
x
N

L
x
V

S

T

K

N

P

P

E

E

G

S

T

I

Q

E

K

A

V

V

V

L

D

K

E

A

I

I

L

T

G

D

K

E

F

F

G

G

R

G

L

V

D

D

I

I

L

L

V

V

N

N

N
|
N

L
x
A

G

G

G

-

S

-

E

I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

E

Q

E

D

E

W

W

E

S

T

D

T

I

I

M

Q

E

T

T

N
|
N

L

L

I

T

A

S

P

I

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

L

P

R

Q

G

M

M

I

M

E

K

Q

K

K

R

N

Q

G

G

V

R

I

I

H

N

I

V

A
x
G

S
|
S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

A

S

G

T
x
Q

L

A

P

N

Y
|
Y

A

A

K
|
K

A

A

G

G

L

V

I

I

N

G

Y

F

S

T

K

K

A

S

L

M

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

V

R

T

V

V

L

N

T

T

V

V

S

A

P
|
P

G
|
G

W

F

I

I

M

E

T
|
T

T

-

S

-

A

-

I

-

K

-

M

-

E

-

R

-

I

-

A

-

E

-

S

-

N

D

S

M

T

N

I

D

E

E

Q

Q

A

R

T

T

Q

A

S

T

V

-

M

-

D

-

A

-

L

L

G

A

G

Q

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

D

P

P

E

R

E

E

V

I

A

A

E

S

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

P

R

E

A

A

G

A

Y

Y

L

I

T

T

G

G

T

E

E

T

Y

L

V

H

I

V

D

N

G

G

active site: G19 (= G23), N113 (= N112), S141 (= S140), Q151 (≠ T151), Y154 (= Y154), K158 (= K158)
binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G15 (= G19), S17 (≠ T21), R18 (≠ K22), I20 (≠ A24), T40 (≠ R44), N62 (≠ D59), V63 (≠ L60), N89 (= N86), A90 (≠ L87), G140 (≠ A139), S141 (= S140), Y154 (= Y154), K158 (= K158), P184 (= P184), G185 (= G185), T189 (= T189)

6t77A Crystal structure of klebsiella pneumoniae fabg(NADPH-dependent) NADP- complex at 1.75 a resolution (see paper)
36% identity, 94% coverage: 13:257/262 of query aligns to 6:240/244 of 6t77A

query
sites
6t77A

K

K

I

I

A

A

L

L

V

V

T

T

G
|
G

G

A

T
x
S

K
x
R

G
|
G

A

I

G

G

K

R

A

A

I

I

A

A

Q

E

R

T

L

L

L

V

D

A

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A

A

R
x
T

N

S

V

E

P

S

E

G

E

A

N

Q

K

A

Q

I

L

S

H

D

F

Y

I

L

S

G

A

A

D

N

-

G

-

K

-

G

-

L

-

M

-
x
L

-
x
N

L
x
V

S

T

K

D

P

P

E

A

G

S

T

I

Q

E

K

S

V

V

V

L

D

E

E

N

I

V

L

R

G

A

K

E

F

F

G

G

R

E

L

V

D

D

I

I

L

L

V

V

N

N

L
x
A

G
|
G

G

-

S

-

E
x
I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

D

Q

D

D

E

W

W

E

N

T

D

T

I

I

I

Q

E

T

T

N

N

L

L

I

S

A

S

P

V

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

M

P

R

Q

A

M

M

I

M

E

K

Q

K

K

R

N

H

G

G

V

R

I

I

H

T

I

I

A

G

S
|
S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

A

S

G

T

Q

L

A

P

N

Y
|
Y

A

A

K

K

A

A

G

G

L

L

I

I

N

G

Y

F

S

S

K

K

A

S

L

L

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

I

R

T

V

V

L

N

T

V

V

V

S

A

P

P

G

G

W

F

I

I

M

E

T

T

T

D

S

-

A

-

I

-

K

-

M

-

M

M

E

T

R

R

I

A

A

L

E

-

S

-

N

-

S

-

T

T

I

D

E

E

Q

Q

A

R

T

A

Q

G

S

T

V

-

M

-

D

-

A

-

L

L

G

A

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

T

P

P

E

N

E

E

V

I

A

A

E

S

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

D

R

E

A

A

G

S

Y

Y

L

I

T

T

G

G

T

E

E

T

Y

L

V

H

I

V

D

N

G

G

active site: G16 (= G23), S138 (= S140), Y151 (= Y154)
binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G19), S14 (≠ T21), R15 (≠ K22), T37 (≠ R44), L58 (vs. gap), N59 (vs. gap), V60 (≠ L60), A87 (≠ L87), G88 (= G88), I89 (≠ E91)

P0AEK2 3-oxoacyl-[acyl-carrier-protein] reductase FabG; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; EC 1.1.1.100 from Escherichia coli (strain K12) (see 2 papers)
35% identity, 94% coverage: 13:257/262 of query aligns to 6:240/244 of P0AEK2

query
sites
P0AEK2

K

K

I

I

A

A

L

L

V

V

T

T

G
|
G

G
x
A

T
x
S

K
x
R

G

G

A

I

G

G

K

R

A

A

I

I

A

A

Q

E

R

T

L

L

L

A

D

A

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A

A

R
x
T

N

S

V

E

P

N

E

G

E

A

N

Q

K

A

Q

I

L

S

H

D

F

Y

I

L

S

G

A

A

D

N

-

G

-

K

-

G

-

L

-

M

-

L

-
x
N

L
x
V

S

T

K

D

P

P

E

A

G

S

T

I

Q

E

K

S

V

V

V

L

D

E

E

K

I

I

L

R

G

A

K

E

F

F

G

G

R

E

L

V

D

D

I

I

L

L

V

V

N

N

N
|
N

L

A

G

G

G

-

S

-

E

I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

D

Q

E

D

E

W

W

E

N

T

D

T

I

I

I

Q

E

T

T

N

N

L

L

I

S

A

S

P

V

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

M

P

R

Q

A

M

M

I

M

E

K

Q

K

K

R

N

H

G

G

V

R

I

I

H

T

I

I

A

G

S

S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

G

S

G

T

Q

L

A

P

N

Y
|
Y

A
|
A

K
|
K

A

A

G

G

L

L

I

I

N

G

Y

F

S

S

K

K

A

S

L

L

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

I

R

T

V

V

L

N

T

V

V

V

S

A

P

P

G

G

W

F

I
|
I

M

E

T

T

T

-

S

-

A

-

I

-

K

D

M

M

M

T

E

R

R

A

I

L

A

S

E

D

S

D

S

Q

N

R

S

A

T

G

I

I

E

-

Q

-

A

-

T

-

Q

-

S

-

V

-

M

-

D

-

A

-

L

L

G

A

G

Q

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

G

P

A

E

Q

E

E

V

I

A

A

E

N

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

D

R

E

A

A

G

A

Y

Y

L

I

T

T

G

G

T
x
E

E

T

Y

L

V

H

I

V

D

N

G

G

GASR 12:15 (≠ GGTK 19:22) binding NADP(+)
T37 (≠ R44) binding NADP(+)
NV 59:60 (≠ -L 60) binding NADP(+)
N86 (= N86) binding NADP(+)
Y151 (= Y154) mutation to F: Defect in the affinity for NADPH.
YAAAK 151:155 (= YAAAK 154:158) binding NADP(+)
A154 (= A157) mutation to T: Decreases in the thermolability of the reductase; when associated with K-233.
K155 (= K158) mutation to A: Defect in the affinity for NADPH.
I184 (= I187) binding NADP(+)
E233 (≠ T250) mutation to K: Decreases in the thermolability of the reductase; when associated with T-154.

1q7bA The structure of betaketoacyl-[acp] reductase from e. Coli in complex with NADP+ (see paper)
35% identity, 94% coverage: 13:257/262 of query aligns to 5:239/243 of 1q7bA

query
sites
1q7bA

K

K

I

I

A

A

L

L

V

V

T

T

G
|
G

G

A

T
x
S

K
x
R

G
|
G

A

I

G

G

K

R

A

A

I

I

A

A

Q

E

R

T

L

L

L

A

D

A

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A

A

R
x
T

N

S

V

E

P

N

E

G

E

A

N

Q

K

A

Q

I

L

S

H

D

F

Y

I

L

S

G

A

A

D

N

-

G

-

K

-

G

-

L

-

M

-

L

-
x
N

L
x
V

S

T

K

D

P

P

E

A

G

S

T

I

Q

E

K

S

V

V

V

L

D

E

E

K

I

I

L

R

G

A

K

E

F

F

G

G

R

E

L

V

D

D

I

I

L

L

V

V

N

N

N
|
N

L
x
A

G
|
G

G

-

S

-

E
x
I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

D

Q

E

D
x
E

W

W

E

N

T

D

T

I

I

I

Q

E

T

T

N

N

L

L

I

S

A

S

P

V

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

M

P

R

Q

A

M

M

I

M

E

K

Q

K

K

R

N

H

G

G

V

R

I

I

H

T

I

I

A

G

S
|
S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

G

S

G

T
x
Q

L

A

P

N

Y
|
Y

A

A

K
|
K

A

A

G

G

L

L

I

I

N

G

Y

F

S

S

K

K

A

S

L

L

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

I

R

T

V

V

L

N

T

V

V

V

S

A

P
|
P

G
|
G

W

F

I
|
I

M

E

T

T

T

-

S

-

A

-

I

-

K

D

M

M

M

T

E

R

R

A

I

L

A

S

E

D

S

D

S

Q

N

R

S

A

T

G

I

I

E

-

Q

-

A

-

T

-

Q

-

S

-

V

-

M

-

D

-

A

-

L

L

G

A

G

Q

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

G

P

A

E

Q

E

E

V

I

A

A

E

N

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

D

R

E

A

A

G

A

Y

Y

L

I

T

T

G

G

T
x
E

E
x
T

Y

L

V

H

I

V

D

N

G

G

active site: G15 (= G23), E101 (≠ D104), S137 (= S140), Q147 (≠ T151), Y150 (= Y154), K154 (= K158)
binding calcium ion: E232 (≠ T250), T233 (≠ E251)
binding nadp nicotinamide-adenine-dinucleotide phosphate: G11 (= G19), S13 (≠ T21), R14 (≠ K22), T36 (≠ R44), N58 (vs. gap), V59 (≠ L60), N85 (= N86), A86 (≠ L87), G87 (= G88), I88 (≠ E91), S137 (= S140), Y150 (= Y154), K154 (= K158), P180 (= P184), G181 (= G185), I183 (= I187)

P0A2C9 3-oxoacyl-[acyl-carrier-protein] reductase FabG; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; EC 1.1.1.100 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
35% identity, 94% coverage: 13:257/262 of query aligns to 6:240/244 of P0A2C9

query
sites
P0A2C9

K

K

I

I

A

A

L

L

V

V

T

T

G

G

G

A

T

S

K

R

G

G

A

I

G

G

K

R

A

A

I

I

A

A

Q

E

R

T

L

L

L

V

D

A

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A

A

R

T

N

S

V

E

P

N

E

G

E

A

N

K

K

N

Q

I

L

S

H

D

F

Y

I

L

S

G

A

A

D

N

-

G

-

K

-

G

-

L

-

M

-

L

-

N

L

V

S

T

K

D

P

P

E

A

G

S

T

I

Q

E

K

S

V

V

V

L

D

E

E

N

I

I

L

R

G

A

K

E

F

F

G

G

R

E

L

V

D

D

I

I

L

L

V

V

N

N

L

A

G

G

G

-

S

-

E

I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

D

Q

D

D

E

W

W

E

N

T

D

T

I

I

I

Q

E

T

T

N

N

L

L

I

S

A

S

P

V

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

M

P

R

Q

A

M
|
M

I

M

E

K

Q

K

K

R

N

C

G

G

V

R

I

I

H

T

I

I

A

G

S

S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

A

S

G

T

Q

L

A

P

N

Y

Y

A

A

K

K

A

A

G

G

L

L

I

I

N

G

Y

F

S

S

K

K

A

S

L

L

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

I

R

T

V

V

L

N

T

V

V

V

S

A

P

P

G

G

W

F

I

I

M

E

T

T

T

-

S

-

A

-

I

-

K

D

M

M

M

T

E

R

R

A

I

L

A

S

E

D

S

D

S

Q

N

R

S

A

T

G

I

I

E

-

Q

-

A

-

T

-

Q

-

S

-

V

-

M

-

D

-

A

-

L

L

G

A

G

Q

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

G

P

A

E

Q

E

E

V

I

A

A

E

S

L

A

V

V

G

A

F

F

L

L

V
x
A

S
|
S

P

D

R

E

A

A

G

S

Y

Y

L

I

T

T

G

G

T

E

E

T

Y

L

V

H

I

V

D

N

G

G

M125 (= M127) mutation to I: Loss of the temperature-sensitive phenotype; when associated with T-223.
A223 (≠ V240) mutation to T: Loss of the temperature-sensitive phenotype; when associated with I-125.
S224 (= S241) mutation to F: Distorts the local conformation and prevent stacking around Phe-221. The S224F mutation would additionally disrupt the hydrogen bond formed between Ser-224 and Glu-226.

1q7cA The structure of betaketoacyl-[acp] reductase y151f mutant in complex with NADPH fragment (see paper)
34% identity, 94% coverage: 13:257/262 of query aligns to 5:239/243 of 1q7cA

query
sites
1q7cA

K

K

I

I

A

A

L

L

V

V

T

T

G
|
G

G

A

T
x
S

K
x
R

G
|
G

A

I

G

G

K

R

A

A

I

I

A

A

Q

E

R

T

L

L

L

A

D

A

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A
|
A

R
x
T

N

S

V

E

P

N

E

G

E

A

N

Q

K

A

Q

I

L

S

H

D

F

Y

I

L

S

G

A

A

D

N

-

G

-

K

-

G

-

L

-

M

-
x
L

-
x
N

L
x
V

S

T

K

D

P

P

E

A

G

S

T

I

Q

E

K

S

V

V

V

L

D

E

E

K

I

I

L

R

G

A

K

E

F

F

G

G

R

E

L

V

D

D

I

I

L

L

V

V

N

N

L

A

G
|
G

G

-

S

-

E
x
I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

D

Q

E

D

E

W

W

E

N

T

D

T

I

I

I

Q

E

T

T

N

N

L

L

I

S

A

S

P

V

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

M

P

R

Q

A

M

M

I

M

E

K

Q

K

K

R

N

H

G

G

V

R

I

I

H

T

I

I

A

G

S
|
S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

G

S

G

T
x
Q

L

A

P

N

Y
x
F

A

A

K
|
K

A

A

G

G

L

L

I

I

N

G

Y

F

S

S

K

K

A

S

L

L

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

I

R

T

V

V

L

N

T

V

V

V

S

A

P

P

G

G

W

F

I

I

M

E

T

T

T

-

S

-

A

-

I

-

K

D

M

M

M

T

E

R

R

A

I

L

A

S

E

D

S

D

S

Q

N

R

S

A

T

G

I

I

E

-

Q

-

A

-

T

-

Q

-

S

-

V

-

M

-

D

-

A

-

L

L

G

A

G

Q

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

G

P

A

E

Q

E

E

V

I

A

A

E

N

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

D

R

E

A

A

G

A

Y

Y

L

I

T

T

G

G

T

E

E

T

Y

L

V

H

I

V

D

N

G

G

active site: G15 (= G23), S137 (= S140), Q147 (≠ T151), F150 (≠ Y154), K154 (= K158)
binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G11 (= G19), S13 (≠ T21), R14 (≠ K22), A35 (= A43), T36 (≠ R44), L57 (vs. gap), N58 (vs. gap), V59 (≠ L60), G87 (= G88), I88 (≠ E91)

7emgB Carbonyl reductase variant 4 (r123c/l209p/f183y/v61k) from serratia marcescens complexed with NADP+ (see paper)
34% identity, 94% coverage: 13:257/262 of query aligns to 5:239/243 of 7emgB

query
sites
7emgB

K

K

I

I

A

V

L

L

V

V

T

T

G
|
G

G

A

T
x
S

K
x
R

G

G

A

I

G

G

K

R

A

A

I

I

A

A

Q

E

R

T

L

F

L

V

D

A

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A

A

R
x
T

N

S

V

E

P

S

E

G

E

A

N

E

K

A

Q

I

L

S

H

G

F

Y

I

L

S

G

A

A

D

N

-

G

-

K

-

G

-

F

-

M

-

L

-
x
N

L
x
V

S

K

K

D

P

A

E

Q

G

S

T

I

Q

D

K

S

V

V

V

L

D

A

E

S

I

I

L

R

G

A

K

E

F

F

G

G

R

E

L

I

D

D

I

I

L

L

V

V

N

N

L

A

G

G

G

-

S

-

E
x
I

T

T

S

R

G

D

G

N

G

L

F

L

R

M

A

R

L

M

T

K

D

D

Q

D

D

E

W

W

E

E

T

D

T

I

I

L

Q

D

T

T

N

N

L

L

I

T

A

S

P

V

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

M

P

C

Q

A

M

M

I

M

E

K

Q

K

K

R

N

F

G

G

V

R

I

I

H

T

I

I

A

G

S

S

I

V

Q

V

G

G

K

T

L

M

P

G

L

-

Y

N

E

A

S

G

T

Q

L

A

P

N

Y

Y

A

A

K

K

A

A

G

G

L

L

I

I

N

G

Y

F

S

S

K

K

A

S

L

L

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

I

R

T

V

V

L

N

T

V

V

V

S

A

P

P

G

G

W

Y

I

I

M

E

T

T

T

-

S

-

A

-

I

-

K

D

M

M

M

T

E

R

R

A

I

L

A

T

E

D

S

D

S

Q

N

R

S

A

T

G

I

I

E

-

Q

-

A

-

T

-

Q

-

S

-

V

-

M

-

D

-

A

-

L

L

G

S

I

V

P

P

Y

A

G

N

R

R

P

P

A

G

K

D

P

A

E

K

E

E

V

I

A

A

E

S

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

D

R

E

A

A

G

G

Y

Y

L

I

T

T

G

G

T

E

E

T

Y

L

V

H

I

V

D

N

G

G

binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G11 (= G19), S13 (≠ T21), R14 (≠ K22), T36 (≠ R44), N58 (vs. gap), V59 (≠ L60), I88 (≠ E91)

3tzcA Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg)(y155f) from vibrio cholerae (see paper)
33% identity, 95% coverage: 10:257/262 of query aligns to 6:222/224 of 3tzcA

query
sites
3tzcA

L

L

S

E

N

G

K

K

I

V

A

A

L

L

V

V

T

T

G
|
G

G

A

T
x
S

K
x
R

G

G

A

I

G

G

K

K

A

A

I

I

A

A

Q

E

R

L

L

L

L

A

D

E

A

R

G

G

A

A

T

K

V

V

I

I

I

G

T

T

A
|
A

R
x
T

N

S

V

E

P

S

E

G

E

A

N

Q

K

A

Q

I

L

S

H

D

F

Y

I

L

-

G

-

D

-

N

-

G

-

K

-

G

-

M

S

A

A

L

D
x
N

L
x
V

S

T

K

N

P

P

E

E

G

S

T

I

Q

E

K

A

V

V

V

L

D

K

E

A

I

I

L

T

G

D

K

E

F

F

G

G

R

G

L

V

D

D

I

I

L

L

V

V

N

N

L

A

G
|
G

G
x
I

S

T

E

R

T

M

S

R

G

-

F

-

R

-

A

-

L

M

T

K

D

E

Q

E

D

E

W

W

E

S

T

D

T

I

I

M

Q

E

T
|
T

N

N

L

L

I

T

A

S

P

I

V

F

R

R

L

L

D

S

R

K

G

A

F

V

L

L

P

R

Q

G

M

M

I

M

E

K

Q

K

K

R

N

Q

G

G

V

R

I

I

H

N

I

V

A

G

S

S

I

V

Q

-

G

-

K

-

L

-

P

-

L

-

Y

-

E

-

S

-

T

-

L

-

P

-

Y

-

A

V

A

A

K

K

A

A

G

G

L

V

I

I

N

G

Y

F

S

T

K

K

A

S

L

M

S

A

N

R

E

E

V

V

S

A

P

S

K

R

G

G

V

V

R

T

V

V

L

N

T

T

V

V

S

A

P

P

G

G

W

F

I

I

M

E

T

T

T

D

S

-

A

-

I

-

K

-

M

-

E

-

R

-

I

M

A

D

E

E

S

Q

S

R

N

T

S

A

T

T

I

L

E

A

Q

Q

A

-

T

-

Q

-

S

-

V

-

M

-

D

-

A

-

L

-

G

-

I

V

P

P

Y

A

G

G

R

R

P

L

A

G

K

D

P

P

E

R

E

E

V

I

A

A

E

S

L

A

V

V

G

A

F

F

L

L

V

A

S

S

P

P

R

E

A

A

G

A

Y

Y

L

I

T

T

G

G

T

E

E

T

Y

L

V

H

I

V

D

N

G

G

binding nadp nicotinamide-adenine-dinucleotide phosphate: G15 (= G19), S17 (≠ T21), R18 (≠ K22), A39 (= A43), T40 (≠ R44), N62 (≠ D59), V63 (≠ L60), G91 (= G88), I92 (≠ G89), T108 (= T111)

1o5iB Crystal structure of 3-oxoacyl-(acyl carrier protein) reductase (tm1169) from thermotoga maritima at 2.50 a resolution
34% identity, 95% coverage: 10:257/262 of query aligns to 2:228/234 of 1o5iB

query
sites
1o5iB

L

I

S

R

N

D

K

K

I

G

A

V

L

L

V

V

T

L

G
x
A

G

A

T
x
S

K
x
R

G
|
G

A
x
I

G

G

K

R

A

A

I

V

A

A

Q

D

R

V

L

L

L

S

D

Q

A

E

G

G

A

A

T

E

V

V

I

T

I

I

T

C

A

A

R
|
R

N

N

V

E

P

E

E

L

N

K

K

R

Q

S

L

G

H

H

-

R

F

Y

I

V

S

V

A

C

D
|
D

L
|
L

S

R

K

K

P

D

E

-

G

-

T

-

Q

-

K

-

V

-

V

L

D

D

E

L

I

L

L

F

G

E

K

K

F

V

G

K

R

E

L

V

D

D

I

I

L

L

V

V

N

L

N

N

L

A

G

G

G
|
G

S

P

E

K

T

-

S

-

G

A

G

G

G

F

F

F

R

D

A

E

L

L

T

T

D

N

Q

E

D

D

W

F

E

K

T

E

T

A

I

I

Q

D

T

S

N

L

L

F

I

L

A

N

P

M

V

I

R

K

L

I

D

V

R

R

G

N

F

Y

L

L

P

P

Q

A

M

M

I

K

E

E

Q

K

K

G

N

W

G

G

V

R

I

I

I

V

H

A

I

I

A

T

S
|
S

I

F

Q

S

G

V

K

I

L

S

P

P

L

I

Y

-

E

E

S

N

T
x
L

L
x
Y

P

T

Y
x
S

A

N