Comparing WP_013451477.1 NCBI__GCF_000183405.1:WP_013451477.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
4grsA Crystal structure of a chimeric dah7ps (see paper)
55% identity, 98% coverage: 1:329/337 of query aligns to 1:329/333 of 4grsA
3pg9A Thermotoga maritima dah7p synthase in complex with inhibitor (see paper)
53% identity, 99% coverage: 1:334/337 of query aligns to 1:334/338 of 3pg9A
1rzmA Crystal structure of 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase (dahps) from thermotoga maritima complexed with cd2+, pep and e4p (see paper)
53% identity, 99% coverage: 1:334/337 of query aligns to 1:334/338 of 1rzmA
4c1kA Crystal structure of pyrococcus furiosus 3-deoxy-d-arabino- heptulosonate 7-phosphate synthase (see paper)
61% identity, 76% coverage: 73:329/337 of query aligns to 4:258/262 of 4c1kA
1zcoB Crystal structure of pyrococcus furiosus 3-deoxy-d-arabino- heptulosonate 7-phosphate synthase (see paper)
61% identity, 76% coverage: 73:329/337 of query aligns to 4:258/262 of 1zcoB
1zcoA Crystal structure of pyrococcus furiosus 3-deoxy-d-arabino- heptulosonate 7-phosphate synthase (see paper)
61% identity, 76% coverage: 73:329/337 of query aligns to 4:258/262 of 1zcoA
1vs1D Crystal structure of 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase (dahp synthase) from aeropyrum pernix in complex with mn2+ and pep
63% identity, 77% coverage: 67:327/337 of query aligns to 6:266/271 of 1vs1D
5j6fA Crystal structure of dah7ps-cm complex from geobacillus sp. With prephenate (see paper)
53% identity, 77% coverage: 71:329/337 of query aligns to 93:351/352 of 5j6fA
Sites not aligning to the query:
3tfcA 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7- phosphoheptulonate synthase/chorismate mutase (aroa) from listeria monocytogenes egd-e in complex with phosphoenolpyruvate (see paper)
53% identity, 74% coverage: 71:319/337 of query aligns to 82:330/343 of 3tfcA
3nvtA 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7- phosphoheptulonate synthase/chorismate mutase (aroa) from listeria monocytogenes egd-e (see paper)
53% identity, 74% coverage: 71:319/337 of query aligns to 83:331/345 of 3nvtA
P39912 Protein AroA(G); EC 2.5.1.54; EC 5.4.99.5 from Bacillus subtilis (strain 168) (see paper)
52% identity, 76% coverage: 71:327/337 of query aligns to 95:351/358 of P39912
Sites not aligning to the query:
1jcxA Aquifex aeolicus kdo8p synthase in complex with api and cadmium (see paper)
31% identity, 70% coverage: 93:329/337 of query aligns to 1:241/255 of 1jcxA
1pe1A Aquifex aeolicus kdo8ps in complex with cadmium and 2-pga (see paper)
31% identity, 67% coverage: 93:319/337 of query aligns to 2:237/258 of 1pe1A
1pcwA Aquifex aeolicus kdo8ps in complex with cadmium and app, a bisubstrate inhibitor (see paper)
31% identity, 67% coverage: 93:319/337 of query aligns to 1:236/257 of 1pcwA
3e12A Cu2+ substituted aquifex aeolicus kdo8ps in complex with kdo8p (see paper)
30% identity, 67% coverage: 93:319/337 of query aligns to 1:237/258 of 3e12A
1pckA Aquifex aeolicus kdo8ps in complex with z-methyl-pep (see paper)
30% identity, 67% coverage: 93:319/337 of query aligns to 1:237/258 of 1pckA
3e0iA Cu2+ substituted aquifex aeolicus kdo8ps in complex with pep (see paper)
30% identity, 67% coverage: 93:319/337 of query aligns to 1:242/263 of 3e0iA
2a21A Aquifex aeolicus kdo8ps in complex with pep, po4, and zn2+ (see paper)
30% identity, 67% coverage: 93:319/337 of query aligns to 1:242/263 of 2a21A
1jcyA Aquifex aeolicus kdo8p synthase in complex with r5p, pep and cadmium (see paper)
30% identity, 67% coverage: 93:319/337 of query aligns to 1:242/263 of 1jcyA
1fwwA Aquifex aeolicus kdo8p synthase in complex with pep, a5p and cadmium (see paper)
30% identity, 67% coverage: 93:319/337 of query aligns to 1:242/263 of 1fwwA
>WP_013451477.1 NCBI__GCF_000183405.1:WP_013451477.1
MIVVMQIGSKENELQEVCRKAESIGFTPHIIYGKERNVIGLVGLGDRDNIGVIEDMPGVD
RVVPITKPYKLSSKEVKKEPSIVEVCGVKFGGEEITVIAGPCSVENEEQIIKTAEYVKAA
GAKMLRGGAFKPRTSPYAFQGLGEEGLKLLAKAREFTGLPVVTEVVNPRDVDLVNKYTDM
FQVGARNIQNFALLSLLGQVGKPVLLKRGMATTIEEFLLAAEYILAEGNRNVVLCERGIR
TFETSTRNTLDISCVPVVKDKSHLPIIVDPSHASGHWHYVPSLSKAAIAAGADGLIIEVH
PEPENALSDGAQSLRPDQFVRLMGELKAIALAVGRYM
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory