Comparing WP_013459243.1 NCBI__GCF_000183725.1:WP_013459243.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
Q9FMF7 Dicarboxylate transporter 2.1, chloroplastic; AtpDCT1; Glutamate/malate translocator from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 94% coverage: 25:462/467 of query aligns to 114:556/563 of Q9FMF7
7t9gA Structure of vcindy-na+ (see paper)
22% identity, 85% coverage: 49:444/467 of query aligns to 43:425/445 of 7t9gA
6wtxA Structure of vcindy in complex with terephthalate (see paper)
22% identity, 85% coverage: 49:444/467 of query aligns to 43:425/445 of 6wtxA
6okzB Structure of vcindy bound to fumarate
22% identity, 85% coverage: 49:444/467 of query aligns to 42:424/444 of 6okzB
>WP_013459243.1 NCBI__GCF_000183725.1:WP_013459243.1
MSLRVKHLYPVVLLGMFALTLWLTPPPLAISPKAWQLFTIFLTTIIAILGNVLPIIAASV
IALAISVLFGVIEPVKAYAGFSESFILMIIAAFLVSHAVHKSGLGKRLSLHIIRRFGHST
LGLGYSLIATDILIAPAFPSNTARSGVLYPIVYGLAHDCGSKVGDNTQRRAGSYLMMTSM
AGLTISSGLWLTAMAVNPVGVGIAETMGIHITFGSWLLYAIVPTLIAFALIPWMLYRIYP
PELRSTPDAPQKAKEALEHMGRISRNEWITAGVFISMLTFWALSGVLGIDKAAVAFGGLG
ILMATRVFGVEDFRSQGEALSTLIWFAILFALSTQLAEMGFMGAVASHFTLYLVGLSWMW
VYILLIAVYVLIHYLFVSQSAHLLALFGIFLAVGVGAGVPGELMAMMLLFATNFNATITP
QGSSCNAIYLSSGYISAREIYIYGGAVTLLTFLVFMIIGTPWILALL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory