Comparing WP_013520142.1 NCBI__GCF_000204645.1:WP_013520142.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 13 hits to proteins with known functional sites (download)
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
48% identity, 100% coverage: 1:561/563 of query aligns to 47:607/608 of Q9LIR4
8hs0A The mutant structure of dhad v178w
48% identity, 99% coverage: 3:561/563 of query aligns to 6:569/570 of 8hs0A
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
50% identity, 98% coverage: 10:559/563 of query aligns to 20:573/575 of P9WKJ5
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
50% identity, 98% coverage: 10:559/563 of query aligns to 7:560/562 of 6ovtA
8imuA Dihydroxyacid dehydratase (dhad) mutant-v497f
45% identity, 99% coverage: 3:561/563 of query aligns to 5:522/523 of 8imuA
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
37% identity, 99% coverage: 6:563/563 of query aligns to 8:566/579 of B5ZZ34
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
36% identity, 99% coverage: 6:563/563 of query aligns to 5:563/576 of 5j85A
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg
36% identity, 96% coverage: 24:563/563 of query aligns to 19:555/568 of 8ej0A
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
36% identity, 96% coverage: 24:563/563 of query aligns to 20:556/569 of 8epzA
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
36% identity, 91% coverage: 24:536/563 of query aligns to 25:537/583 of Q1JUQ1
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
34% identity, 90% coverage: 24:529/563 of query aligns to 23:536/587 of 7m3kA
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
33% identity, 96% coverage: 23:562/563 of query aligns to 27:573/589 of 5oynA
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see 2 papers)
33% identity, 96% coverage: 23:562/563 of query aligns to 33:579/595 of Q9A9Z2
>WP_013520142.1 NCBI__GCF_000204645.1:WP_013520142.1
MTDPMPLNRRSAHITQGKARAPNRSMYYGMGYAEADFDKPMVGVANGHSTITPCNSGLQR
LADAAIEGIREAGGNPQVFGTPTISDGMAMGTEGMKYSLVSREVIADCVETCVQGQWMDG
CVVIGGCDKNMPGGMMGMLRANVPSIYVYGGTILPGSLHGCDLNIVSVFEAVGENAAGKI
SDRELKDIEQHAIPGTGSCGGMYTANTMSSAFEALGMSLPYSSTMANPHQEKADSAKESA
KVLIEAIRRDLKPRDIVTRKAIENAVAVIMAVGGSTNAVLHFLAIAHAAGVDWSIDDFER
MRQKVPVFCDLKPSGRYLAVDLHRAGGIPQVMKMLLNAGLLHGDCMTITGRTIAETLKDV
PGQPRADQDVIRPIDKPLYGHGHLAILKGNLSPEGAVAKITGLKNPVITGPARVFDDEQS
ALAAILDGKIKAGDVMVLRYLGPKGGPGMPEMLAPTGALIGQGLGESVGLITDGRFSGGT
WGMVVGHVAPEAFVGGTIALVHEGDSITIDAHRLLLQLNVGDDELARRRAGWTPPAPRYT
RGVQAKFAFNAASASKGAVLDLF
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory