Comparing WP_013529094.1 NCBI__GCF_000185905.1:WP_013529094.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
32% identity, 50% coverage: 17:274/518 of query aligns to 4:253/253 of 1g9xB
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
32% identity, 50% coverage: 17:274/518 of query aligns to 4:253/254 of 1g6hA
4yerA Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
31% identity, 48% coverage: 13:263/518 of query aligns to 1:224/285 of 4yerA
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
29% identity, 51% coverage: 13:275/518 of query aligns to 2:239/240 of 1ji0A
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
27% identity, 47% coverage: 17:262/518 of query aligns to 1:223/240 of 4ymuJ
6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp (see paper)
27% identity, 48% coverage: 16:263/518 of query aligns to 1:227/253 of 6z5uK
7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation (see paper)
27% identity, 48% coverage: 16:263/518 of query aligns to 3:229/263 of 7d0aB
7d08B Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
27% identity, 48% coverage: 16:263/518 of query aligns to 3:229/263 of 7d08B
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
27% identity, 48% coverage: 17:267/518 of query aligns to 2:228/241 of 4u00A
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
26% identity, 47% coverage: 26:266/518 of query aligns to 35:254/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
26% identity, 47% coverage: 26:266/518 of query aligns to 35:254/382 of 7aheC
Sites not aligning to the query:
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
28% identity, 48% coverage: 27:274/518 of query aligns to 27:249/378 of P69874
Sites not aligning to the query:
7ahdC Opua (e190q) occluded (see paper)
25% identity, 47% coverage: 26:266/518 of query aligns to 35:254/260 of 7ahdC
Sites not aligning to the query:
3c4jA Abc protein artp in complex with atp-gamma-s
27% identity, 48% coverage: 17:267/518 of query aligns to 3:230/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
27% identity, 48% coverage: 17:267/518 of query aligns to 3:230/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
27% identity, 48% coverage: 17:267/518 of query aligns to 3:230/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
27% identity, 48% coverage: 17:267/518 of query aligns to 3:230/242 of 2oljA
3d31A Modbc from methanosarcina acetivorans (see paper)
27% identity, 50% coverage: 17:277/518 of query aligns to 1:232/348 of 3d31A
Sites not aligning to the query:
8y5iA Cryo-em structure of e.Coli spermidine transporter potd-potabc in translocation intermidiate state (see paper)
28% identity, 48% coverage: 27:274/518 of query aligns to 12:234/358 of 8y5iA