Comparing WP_013529349.1 NCBI__GCF_000185905.1:WP_013529349.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
38% identity, 95% coverage: 18:385/387 of query aligns to 14:376/380 of P54955
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 99% coverage: 4:385/387 of query aligns to 38:423/440 of O04373
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 97% coverage: 9:385/387 of query aligns to 47:427/442 of P54968
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
38% identity, 91% coverage: 18:370/387 of query aligns to 20:373/389 of 4ewtA
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
33% identity, 88% coverage: 4:342/387 of query aligns to 12:347/398 of 6slfA
Sites not aligning to the query:
7t1qA Crystal structure of the succinyl-diaminopimelate desuccinylase (dape) from acinetobacter baumannii in complex with succinic acid
26% identity, 58% coverage: 56:279/387 of query aligns to 44:277/377 of 7t1qA
Sites not aligning to the query:
3ramA Crystal structure of hmra (see paper)
24% identity, 70% coverage: 21:290/387 of query aligns to 25:273/391 of 3ramA
Sites not aligning to the query:
>WP_013529349.1 NCBI__GCF_000185905.1:WP_013529349.1
MPILNRAAEMQDEVAGWRQHLHQTPELNFDVFKTAAFVTEKLKAFGCDDVVTGLGKTGVV
GIIRGRQGEGPTIGLRADMDALPLNEISGKPYASTIPGKMHACGHDGHTAMLLGAAKYLA
ETRNFTGSVAVIFQPAEEGGGGGNEMVKDGMMERFDISRVFGMHNMPGLPVGQFAIRPGP
IMAATAEFTITVRGKGGHAAMPHGTIDPIVITSQLVGALQTIASRSTDPVEAVVVSVTKF
HAGDAYNIIPETAEIAGTVRTLRKEIAKKSEERIRSICDGLATAFGARIEVDYQANYPVT
FNHAEETVFAGDVAMSVAGDAHVHRGIQPVMGGEDFSYMLEARPGAFIFIGNGDTAGLHN
PAYDFNDEVIPHGMSYWVKLAETALAA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory