SitesBLAST
Comparing WP_013536761.1 NCBI__GCF_000185805.1:WP_013536761.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P32068 Anthranilate synthase alpha subunit 1, chloroplastic; Anthranilate synthase component 1-1; Anthranilate synthase component I-1; Protein A-METHYL TRYPTOPHAN RESISTANT 1; Protein JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1; Protein TRYPTOPHAN BIOSYNTHESIS 5; Protein WEAK ETHYLENE INSENSITIVE 2; EC 4.1.3.27 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
42% identity, 98% coverage: 12:491/492 of query aligns to 74:592/595 of P32068
- D341 (= D258) mutation to N: In trp5-1; insensitive to feedback inhibition by tryptophan and resistance to the herbicide 6-methylanthranilate.
7pi1DDD Aminodeoxychorismate synthase component 1
42% identity, 93% coverage: 29:488/492 of query aligns to 14:457/459 of 7pi1DDD
- binding magnesium ion: G428 (= G459), E438 (= E469)
- binding tryptophan: L33 (= L47), E34 (= E48), S35 (= S49), G39 (= G53), Y41 (≠ F59), P242 (= P273), Y243 (= Y274), M244 (= M275), Q406 (≠ D437), N408 (≠ A439)
P28820 Aminodeoxychorismate synthase component 1; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 1; EC 2.6.1.85 from Bacillus subtilis (strain 168) (see paper)
43% identity, 93% coverage: 29:488/492 of query aligns to 16:464/470 of P28820
- A283 (= A307) mutation to I: Complete loss of aminodeoxychorismate synthase activity.; mutation to K: Absence of covalent intermediate.; mutation to V: Complete loss of aminodeoxychorismate synthase activity.
A0QX93 Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
44% identity, 95% coverage: 15:481/492 of query aligns to 39:512/524 of A0QX93
- K355 (≠ R324) modified: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup)
Q94GF1 Anthranilate synthase alpha subunit 1, chloroplastic; OsASA1; EC 4.1.3.27 from Oryza sativa subsp. japonica (Rice) (see paper)
42% identity, 97% coverage: 12:488/492 of query aligns to 58:571/577 of Q94GF1
- D323 (= D258) mutation to N: Insensitive to feedback inhibition by tryptophan.
O94582 Probable anthranilate synthase component 1; Anthranilate synthase component I; EC 4.1.3.27 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
41% identity, 99% coverage: 4:489/492 of query aligns to 7:479/489 of O94582
- S390 (= S401) modified: Phosphoserine
- S392 (≠ A403) modified: Phosphoserine
Sites not aligning to the query:
- 488 modified: Phosphoserine
5cwaA Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound (see paper)
43% identity, 96% coverage: 10:481/492 of query aligns to 14:491/505 of 5cwaA
- active site: Q248 (= Q244), E301 (= E291), A317 (= A307), E345 (= E335), H382 (= H372), T409 (= T399), Y433 (= Y423), R453 (= R443), G469 (= G459), E482 (= E472), K486 (= K476)
- binding 3-{[(1Z)-1-carboxyprop-1-en-1-yl]oxy}-2-hydroxybenzoic acid: Y433 (= Y423), I452 (= I442), A466 (= A456), G467 (= G457), K486 (= K476)
7bvdA Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]
44% identity, 95% coverage: 15:481/492 of query aligns to 19:487/499 of 7bvdA
- active site: Q248 (= Q244), E301 (= E291), A317 (= A307), E341 (= E335), H378 (= H372), T405 (= T399), Y429 (= Y423), R449 (= R443), G465 (= G459), E478 (= E472), K482 (= K476)
- binding pyruvic acid: S93 (≠ V90), G94 (≠ E91), A100 (≠ L97)
1i1qA Structure of the cooperative allosteric anthranilate synthase from salmonella typhimurium (see paper)
43% identity, 76% coverage: 117:490/492 of query aligns to 142:512/512 of 1i1qA
- active site: Q259 (= Q244), E305 (= E291), A323 (= A307), E357 (= E335), H394 (= H372), T421 (= T399), Y445 (= Y423), R465 (= R443), G481 (= G459), E494 (= E472), K498 (= K476)
- binding tryptophan: P287 (= P273), Y288 (= Y274), M289 (= M275), G450 (= G428), C461 (≠ A439)
Sites not aligning to the query:
P00898 Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
43% identity, 76% coverage: 117:490/492 of query aligns to 146:516/520 of P00898
- C174 (≠ F146) mutation to Y: Almost no change in feedback control by tryptophan.
- N288 (= N270) mutation to D: Decrease in feedback control by tryptophan.
- P289 (= P271) mutation to L: Decrease in feedback control by tryptophan.
- M293 (= M275) mutation to T: Complete loss of feedback control by tryptophan.
- F294 (≠ Y276) mutation to L: Decrease in feedback control by tryptophan.
- G305 (= G287) mutation to S: Decrease in feedback control by tryptophan.
- R402 (≠ N376) mutation to W: Almost no change in feedback control by tryptophan.
- G460 (= G434) mutation to D: Almost no change in feedback control by tryptophan.
- C465 (≠ A439) mutation to Y: Complete loss of feedback control by tryptophan. 4-fold decrease of affinity binding for chorismate.
- H515 (≠ R489) mutation to Y: Almost no change in feedback control by tryptophan.
Sites not aligning to the query:
- 39 E→K: Complete loss of feedback control by tryptophan.
- 40 binding L-tryptophan; S→F: Complete loss of feedback control by tryptophan.
- 41 A→V: Decrease in feedback control by tryptophan.
- 50 binding L-tryptophan
- 128 R→H: Almost no change in feedback control by tryptophan.
1i7sA Anthranilate synthase from serratia marcescens in complex with its end product inhibitor l-tryptophan (see paper)
41% identity, 80% coverage: 98:490/492 of query aligns to 118:507/511 of 1i7sA
- active site: Q254 (= Q244), E300 (= E291), A318 (= A307), E352 (= E335), H389 (= H372), T416 (= T399), Y440 (= Y423), R460 (= R443), G476 (= G459), E489 (= E472), K493 (= K476)
- binding tryptophan: P282 (= P273), Y283 (= Y274), M284 (= M275), V444 (= V427), G445 (= G428), D454 (= D437), C456 (≠ A439)
Sites not aligning to the query:
1i7qA Anthranilate synthase from s. Marcescens (see paper)
41% identity, 80% coverage: 98:490/492 of query aligns to 124:513/517 of 1i7qA
- active site: Q260 (= Q244), E306 (= E291), A324 (= A307), E358 (= E335), H395 (= H372), T422 (= T399), Y446 (= Y423), R466 (= R443), G482 (= G459), E495 (= E472), K499 (= K476)
- binding magnesium ion: E358 (= E335), E495 (= E472)
- binding pyruvic acid: Y446 (= Y423), I465 (= I442), R466 (= R443), A479 (= A456), G480 (= G457), K499 (= K476)
P05041 Aminodeoxychorismate synthase component 1; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 1; EC 2.6.1.85 from Escherichia coli (strain K12) (see 4 papers)
33% identity, 96% coverage: 16:485/492 of query aligns to 3:452/453 of P05041
- S36 (= S49) binding L-tryptophan
- E258 (= E291) mutation to A: The reaction is extremely slow.; mutation to D: The reaction is extremely slow.
- K274 (≠ A307) mutation to A: Absence of covalent intermediate. Addition of ammonia allows the formation of the covalent intermediate and shows that ammonia can replace the function of K-274. Reduced catalytic efficiency.; mutation to R: Absence of covalent intermediate.; mutation to R: Reduced catalytic efficiency.
- G275 (= G308) mutation to S: Catalytically inactive for both the glutamine-dependent and ammonia-dependent reactions and fails to interact with PabA.
- R311 (= R344) mutation to K: Catalytically active in the NH3-dependent, but inactive for the glutamine-dependent reactions and fails to complex with PabA.
- R316 (= R349) mutation to H: Catalytically inactive for both the glutamine-dependent and ammonia-dependent reactions and fails to interact with PabA.
- S322 (= S355) mutation to T: Complete loss of aminodeoxychorismate synthase activity.
- H339 (= H372) mutation to W: Catalytically inactive for both the glutamine-dependent and ammonia-dependent reactions and fails to interact with PabA.
P00897 Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Serratia marcescens (see paper)
41% identity, 76% coverage: 116:490/492 of query aligns to 144:515/519 of P00897
- PYM 290:292 (= PYM 273:275) binding L-tryptophan
- E360 (= E335) binding Mg(2+)
- E497 (= E472) binding Mg(2+)
Sites not aligning to the query:
1k0eA The crystal structure of aminodeoxychorismate synthase from formate grown crystals (see paper)
33% identity, 96% coverage: 16:485/492 of query aligns to 1:436/437 of 1k0eA
- active site: E256 (= E291), K272 (≠ A307), E286 (= E335), H323 (= H372), S350 (≠ T399), W374 (≠ Y423), R394 (= R443), G410 (= G459), E423 (= E472), K427 (= K476)
- binding tryptophan: L32 (= L47), H33 (≠ E48), S34 (= S49), Y41 (≠ W56), F44 (= F59), P238 (= P273), F239 (≠ Y274), S240 (≠ M275)
1k0gA The crystal structure of aminodeoxychorismate synthase from phosphate grown crystals (see paper)
31% identity, 96% coverage: 16:485/492 of query aligns to 3:419/420 of 1k0gA
- active site: E258 (= E291), K274 (= K331), E278 (= E335), S333 (≠ T399), W357 (≠ Y423), R377 (= R443), G393 (= G459), E406 (= E472), K410 (= K476)
- binding phosphate ion: D113 (= D127), R116 (≠ K130), D347 (= D413), R353 (≠ E419)
- binding tryptophan: L34 (= L47), H35 (≠ E48), S36 (= S49), Y43 (≠ W56), S44 (≠ G57), F46 (= F59), P240 (= P273), F241 (≠ Y274), S242 (≠ M275)
1k0gB The crystal structure of aminodeoxychorismate synthase from phosphate grown crystals (see paper)
31% identity, 95% coverage: 16:484/492 of query aligns to 3:415/415 of 1k0gB
- active site: E258 (= E291), K274 (≠ A307), E277 (= E335), S330 (≠ T399), W354 (≠ Y423), R374 (= R443), G390 (= G459), E403 (= E472), K407 (= K476)
- binding phosphate ion: Y112 (= Y126), D113 (= D127), R116 (≠ K130), D344 (= D413), R350 (≠ E419)
- binding tryptophan: L34 (= L47), H35 (≠ E48), S36 (= S49), Y43 (≠ W56), S44 (≠ G57), R45 (= R58), F46 (= F59), P240 (= P273), F241 (≠ Y274)
8hx8A Crystal structure of 4-amino-4-deoxychorismate synthase from streptomyces venezuelae co-crystallized with chorismate (see paper)
33% identity, 75% coverage: 119:485/492 of query aligns to 308:671/673 of 8hx8A
Sites not aligning to the query:
8hx9A Crystal structure of 4-amino-4-deoxychorismate synthase from streptomyces venezuelae with chorismate (see paper)
40% identity, 53% coverage: 224:485/492 of query aligns to 370:632/632 of 8hx9A
- binding (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid: I453 (= I306), K454 (≠ A307), G455 (= G308), T456 (= T309), M547 (≠ V400), Y570 (= Y423), R590 (= R443), V603 (≠ A456), G604 (= G457), G605 (≠ A458), A606 (≠ G459), E619 (= E472), K623 (= K476)
- binding tryptophan: P419 (= P273), Y420 (= Y274), G421 (≠ M275), L574 (≠ V427), G575 (= G428)
Sites not aligning to the query:
5jy9B An iron-bound structure of the salicylate synthase irp9 (see paper)
35% identity, 54% coverage: 217:480/492 of query aligns to 148:418/424 of 5jy9B
- active site: K183 (≠ Q244), E230 (= E291), A246 (= A307), E274 (= E335), H311 (= H372), T338 (= T399), Y362 (= Y423), R381 (= R443), G397 (= G459), E410 (= E472), K414 (= K476)
- binding fe (ii) ion: E274 (= E335), E410 (= E472)
Query Sequence
>WP_013536761.1 NCBI__GCF_000185805.1:WP_013536761.1
MLTLNQVKELHARGYNLFPLHTELLADLDTPLSAFIKLKGVGANMLLESVEGGEKWGRFS
IIGIGRLVTVKSKERFGEVNRLGRIEVKEVETDPLELLREVFKTVKPYKVEGLPEIWGGF
FGYLAYDAVKFFEPRVNVNPNKEDSFLYDMVFSIPEALVVFDNVTHKISVIAFVSTEKGE
VENEYRKGEEKLREVVKLLREGRASFQTEPAPTQSGWVVNFSDEEFMKAVERAKEYIRAG
DIIQVVLSRRFEKPFYADPLTLYRAIRHVNPSPYMYFLDYQDFQVVGASPEVLVRLKNGR
VETRPIAGTRRRGRTKEEDLALERELLNDEKERAEHIMLVDLARNDVGRVAKVGSVKVTD
LMVIERYSHVMHIVSNVVGELKEGADAFDVLKACFPAGTVSGAPKVRAMEIIDEMEPSER
GVYAGAVGYFSFDGNMDTAIAIRTAVVRRNKVYVQAGAGIVADSVPQLEAKETVNKAKAL
FRAVELAERGLT
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory