Comparing WP_013554977.1 NCBI__GCF_000186245.1:WP_013554977.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3tioF Crystal structures of yrda from escherichia coli, a homologous protein of gamma-class carbonic anhydrase, show possible allosteric conformations (see paper)
50% identity, 95% coverage: 7:175/177 of query aligns to 6:173/177 of 3tioF
7aqqz Cryo-em structure of arabidopsis thaliana complex-i (membrane core) (see paper)
47% identity, 89% coverage: 11:168/177 of query aligns to 51:206/233 of 7aqqz
Sites not aligning to the query:
7a23p Plant mitochondrial respiratory complex i (see paper)
47% identity, 89% coverage: 11:168/177 of query aligns to 47:202/224 of 7a23p
Sites not aligning to the query:
8bpxy Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (see paper)
44% identity, 92% coverage: 11:173/177 of query aligns to 52:212/265 of 8bpxy
Sites not aligning to the query:
8befy Cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane core) (see paper)
44% identity, 92% coverage: 11:173/177 of query aligns to 52:212/265 of 8befy
Sites not aligning to the query:
3r3rA Structure of the yrda ferripyochelin binding protein from salmonella enterica
49% identity, 95% coverage: 7:175/177 of query aligns to 11:178/184 of 3r3rA
7ar7y Cryo-em structure of arabidopsis thaliana complex-i (open conformation) (see paper)
44% identity, 92% coverage: 11:173/177 of query aligns to 51:211/268 of 7ar7y
Sites not aligning to the query:
7aqqy Cryo-em structure of arabidopsis thaliana complex-i (membrane core) (see paper)
44% identity, 92% coverage: 11:173/177 of query aligns to 51:211/268 of 7aqqy
4n27A X-ray structure of brucella abortus rica (see paper)
46% identity, 98% coverage: 1:173/177 of query aligns to 1:170/175 of 4n27A
8e73G2 qcr9 (see paper)
45% identity, 92% coverage: 11:173/177 of query aligns to 51:206/258 of 8e73G2
Q5KW03 Carbonic anhydrase; Gamma-carbonic anhydrase; Cag; EC 4.2.1.1 from Geobacillus kaustophilus (strain HTA426) (see paper)
46% identity, 98% coverage: 4:176/177 of query aligns to 2:166/182 of Q5KW03
3vnpA Crystal structure of hypothetical protein (gk2848) from geobacillus kaustophilus
46% identity, 98% coverage: 4:176/177 of query aligns to 3:167/171 of 3vnpA
7zw9A Crystal structure of a gamma-carbonic anhydrase from the pathogenic bacterium burkholderia pseudomallei (see paper)
46% identity, 94% coverage: 11:177/177 of query aligns to 10:167/173 of 7zw9A
2fkoA Structure of ph1591 from pyrococcus horikoshii ot3 (see paper)
44% identity, 98% coverage: 4:177/177 of query aligns to 3:168/173 of 2fkoA
1v3wA Structure of ferripyochelin binding protein from pyrococcus horikoshii ot3 (see paper)
44% identity, 98% coverage: 4:177/177 of query aligns to 3:168/173 of 1v3wA
6iveA Molecular structure of a thermostable and a zinc ion binding gamma- class carbonic anhydrase (see paper)
42% identity, 98% coverage: 4:177/177 of query aligns to 2:161/168 of 6iveA
3ixcA Crystal structure of hexapeptide transferase family protein from anaplasma phagocytophilum
38% identity, 97% coverage: 4:175/177 of query aligns to 5:165/166 of 3ixcA
6sc4B Gamma-carbonic anhydrase from the haloarchaeon halobacterium sp. (see paper)
31% identity, 98% coverage: 4:177/177 of query aligns to 3:176/178 of 6sc4B
8bpxx Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (see paper)
33% identity, 85% coverage: 12:161/177 of query aligns to 27:174/210 of 8bpxx
8gpmA Acinetobacter baumannii carbonic anhydrase
34% identity, 93% coverage: 9:173/177 of query aligns to 8:164/193 of 8gpmA
>WP_013554977.1 NCBI__GCF_000186245.1:WP_013554977.1
MPRILEYQGMSPKLGAGSWIAPGATVIGDVELGEDASIWFGCVVRGDVHRIRIGARSNIQ
DLSMIHVTHYKNPDKSDGHPTIIGDDVTVGHRVMLHGCTVEDACLIGMSATILDGAIIGR
ESIVGAGALVTGGKIFPPRSLILGSPAKVVRQLSDEEVAELYASARRYVEFMRNYRK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory