SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_013607478.1 NCBI__GCF_000190435.1:WP_013607478.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

5x40A Structure of a cbio dimer bound with amppcp (see paper)
38% identity, 88% coverage: 9:229/251 of query aligns to 10:231/280 of 5x40A

query
sites
5x40A
I
 
L
S
 
T
Y
 
Y
T
 
A
Y
x
F
P
 
P
G
 
G
G
 
G
T
x
V
K
 
K
A
|
A
L
 
L
D
 
D
E
 
D
I
 
L
S
 
S
F
 
L
S
 
A
V
 
V
E
 
P
E
 
K
G
 
G
Q
 
E
S
 
S
V
 
L
A
 
A
I
 
I
L
 
L
G
 
G
S
 
P
N
|
N
G
|
G
A
 
A
G
|
G
K
|
K
S
|
S
T
|
T
L
 
L
L
 
L
D
 
L
I
 
H
L
 
L
L
 
N
G
 
G
-
 
T
-
 
L
W
 
R
N
 
P
K
 
Q
V
 
S
G
 
G
D
 
R
V
 
V
S
 
-
L
 
L
F
 
L
G
 
G
K
 
G
D
 
T
L
 
A
S
 
T
S
 
G
Y
 
H
G
 
S
R
 
R
K
 
K
E
 
D
L
 
L
G
 
T
-
 
G
-
 
W
-
 
R
R
 
R
T
 
R
L
 
V
A
 
G
L
 
L
V
 
V
P
 
L
Q
|
Q
-
 
D
S
 
A
E
 
D
H
 
D
Y
 
Q
N
 
L
F
 
F
S
 
A
F
 
T
T
 
T
L
 
V
L
 
F
E
 
E
Y
 
D
T
 
V
L
 
S
F
 
F
G
 
G
R
 
-
S
 
-
P
 
P
Y
 
L
L
 
-
S
 
-
Q
 
N
M
 
L
G
 
G
I
 
L
P
 
S
T
 
E
Q
 
A
E
 
E
D
 
A
A
 
R
E
 
A
I
 
R
A
 
V
S
 
E
Q
 
E
A
 
A
L
 
L
K
 
A
E
 
A
V
 
L
G
 
S
L
 
I
A
 
S
A
 
D
Y
 
L
E
 
R
D
 
D
R
 
R
P
 
P
I
 
T
T
x
H
S
x
M
L
|
L
S
|
S
G
 
G
G
|
G
E
x
Q
H
 
K
Q
 
R
L
 
R
L
 
V
L
 
A
L
 
I
A
 
A
R
 
G
A
 
A
I
 
V
A
 
A
Q
 
M
Q
 
R
S
 
P
K
 
E
V
 
V
L
 
L
L
 
L
L
 
L
D
 
D
E
x
Q
P
 
P
T
 
T
S
 
A
A
 
G
L
 
L
D
 
D
P
 
L
A
 
A
N
 
G
R
 
T
M
 
E
R
 
Q
V
 
L
I
 
L
N
 
T
I
 
L
L
 
L
K
 
R
S
 
G
L
 
L
S
 
R
E
 
A
Q
 
A
G
 
G
K
 
M
T
 
T
L
 
L
L
 
V
F
 
F
T
 
S
T
 
T
H
|
H
D
 
D
A
 
V
N
 
E
L
 
L
A
 
A
Y
 
A
E
 
A
L
 
L
A
 
A
T
 
D
H
 
R
V
 
V
A
 
A
M
 
L
L
 
F
K
 
R
K
 
T
G
 
G
K
 
R
M
 
V
L
 
L
C
 
A
Y
 
E
G
 
G
T
 
A
K
 
A
E
 
E
E
 
A
T
 
V
V
 
L
T
 
S
S
 
D
Q
 
R

P07821 Iron(3+)-hydroxamate import ATP-binding protein FhuC; Ferric hydroxamate uptake protein C; Ferrichrome transport ATP-binding protein FhuC; Iron(III)-hydroxamate import ATP-binding protein FhuC; EC 7.2.2.16 from Escherichia coli (strain K12) (see 2 papers)
36% identity, 94% coverage: 6:241/251 of query aligns to 14:251/265 of P07821

query
sites
P07821
L
 
L
R
 
R
Q
 
N
I
 
I
S
 
S
Y
 
F
T
 
R
Y
 
V
P
 
P
G
 
G
G
 
R
T
 
T
K
 
-
A
 
L
L
 
L
D
 
H
E
 
P
I
 
L
S
 
S
F
 
L
S
 
T
V
 
F
E
 
P
E
 
A
G
 
G
Q
 
K
S
 
V
V
 
T
A
 
G
I
 
L
L
 
I
G
 
G
S
 
H
N
 
N
G
 
G
A
 
S
G
 
G
K
|
K
S
 
S
T
 
T
L
 
L
L
 
L
D
 
K
I
 
-
L
 
M
L
 
L
G
 
G
W
 
R
N
 
H
K
 
Q
V
 
P
-
 
P
-
 
S
-
 
E
G
 
G
D
 
E
V
 
I
S
 
L
L
 
L
F
 
D
G
 
A
K
 
Q
D
 
P
L
 
L
S
 
E
S
 
S
Y
 
W
G
 
S
R
 
S
K
 
K
E
 
A
L
 
F
G
 
A
R
 
R
T
 
K
L
 
V
A
 
A
L
 
Y
V
 
L
P
 
P
Q
 
Q
S
 
Q
E
 
L
H
 
P
Y
 
P
N
 
A
F
 
E
S
 
G
F
 
M
T
 
T
L
 
V
L
 
R
E
 
E
Y
 
L
T
 
V
L
 
A
F
 
I
G
 
G
R
 
R
S
 
Y
P
 
P
Y
 
W
L
 
H
S
 
G
Q
 
A
M
 
L
G
 
G
I
 
R
P
 
F
T
 
G
Q
 
A
E
 
A
D
 
D
A
 
R
E
 
E
I
 
K
A
 
V
S
 
E
Q
 
E
A
 
A
L
 
I
K
 
S
E
 
L
V
 
V
G
 
G
L
 
L
A
 
K
A
 
P
Y
 
L
E
 
A
D
 
H
R
 
R
P
 
L
I
 
V
T
 
D
S
 
S
L
 
L
S
 
S
G
 
G
G
 
G
E
 
E
H
 
R
Q
 
Q
L
 
R
L
 
A
L
 
W
L
 
I
A
 
A
R
 
M
A
 
L
I
 
V
A
 
A
Q
 
Q
Q
 
D
S
 
S
K
 
R
V
 
C
L
 
L
L
 
L
L
 
L
D
|
D
E
|
E
P
 
P
T
 
T
S
 
S
A
 
A
L
 
L
D
 
D
P
 
I
A
 
A
N
 
H
R
 
Q
M
 
V
R
 
D
V
 
V
I
 
L
N
 
S
I
 
L
L
 
V
K
 
H
S
 
R
L
 
L
S
 
S
-
 
Q
E
 
E
Q
 
R
G
 
G
K
 
L
T
 
T
L
 
V
L
 
I
F
 
A
T
 
V
T
 
L
H
 
H
D
 
D
A
 
I
N
 
N
L
 
M
A
 
A
Y
 
A
E
 
R
L
 
Y
A
 
C
T
 
D
H
 
Y
V
 
L
A
 
V
M
 
A
L
 
L
K
 
R
K
 
G
G
 
G
K
 
E
M
 
M
L
 
I
C
 
A
Y
 
Q
G
 
G
T
 
T
K
 
P
E
 
A
E
 
E
T
 
I
V
 
M
T
 
R
S
 
G
Q
 
E
M
 
T
L
 
L
T
 
E
T
 
M
L
 
I
Y
 
Y
E
 
G
T
 
I
P
 
P
M
 
M
H
 
G
V
 
I

P78363 Retinal-specific phospholipid-transporting ATPase ABCA4; ATP-binding cassette sub-family A member 4; RIM ABC transporter; RIM proteinv; RmP; Retinal-specific ATP-binding cassette transporter; Stargardt disease protein; EC 7.6.2.1 from Homo sapiens (Human) (see 43 papers)
31% identity, 87% coverage: 4:221/251 of query aligns to 1938:2153/2273 of P78363

query
sites
P78363
L
|
L
E
x
R
L
|
L
R
x
H
Q
x
E
I
x
L
S
x
T
Y
x
K
T
x
I
Y
|
Y
P
|
P
G
|
G
-
x
T
G
x
S
T
x
S
K
x
P
A
|
A
L
x
V
D
|
D
E
x
R
I
x
L
S
x
C
F
x
V
S
x
G
V
|
V
E
x
R
E
x
P
G
|
G
Q
x
E
S
x
C
V
x
F
A
x
G
I
x
L
L
|
L
G
|
G
S
x
V
N
|
N
G
|
G
A
|
A
G
|
G
K
|
K
S
x
T
T
|
T
L
x
T
L
x
F
D
x
K
I
x
M
L
|
L
L
x
T
G
|
G
W
x
D
N
x
T
K
x
T
V
|
V
-
x
T
-
x
S
G
|
G
D
|
D
V
x
A
S
x
T
L
x
V
F
x
A
G
|
G
K
|
K
D
x
S
L
x
I
S
x
L
S
x
T
Y
 
-
G
x
N
R
x
I
K
x
S
E
|
E
L
x
V
G
x
H
R
x
Q
T
x
N
L
x
M
A
x
G
L
x
Y
V
x
C
P
|
P
Q
|
Q
S
 
-
E
 
-
H
 
-
Y
 
-
N
 
-
F
 
-
S
 
-
F
|
F
T
x
D
L
x
A
L
x
I
E
x
D
Y
x
E
T
x
L
L
|
L
F
x
T
G
|
G
R
|
R
S
x
E
P
x
H
-
x
L
-
x
Y
-
x
L
Y
|
Y
L
x
A
S
x
R
Q
x
L
M
x
R
G
|
G
I
x
V