SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_013683062.1 NCBI__GCF_000194625.1:WP_013683062.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

3al0C Crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. (see paper)
32% identity, 97% coverage: 2:91/93 of query aligns to 2:92/564 of 3al0C

query
sites
3al0C
I
 
V
T
 
T
E
 
K
E
 
D
D
 
L
V
 
V
Y
 
L
K
 
H
I
 
L
A
 
E
G
 
N
L
 
L
A
 
A
K
 
R
I
 
L
E
 
E
I
 
L
K
 
S
P
 
E
E
 
D
E
 
Q
V
 
R
E
 
E
N
 
S
F
 
L
R
 
M
K
 
K
E
 
D
F
 
F
Q
 
Q
S
 
E
I
 
I
L
 
L
E
 
D
Y
 
Y
F
 
V
N
 
E
I
 
L
L
 
L
D
 
N
E
 
E
V
 
V
-
 
D
T
 
V
E
 
E
D
 
G
V
 
V
E
 
E
P
 
P
T
 
M
F
 
Y
H
 
T
V
 
P
L
 
V
P
 
E
I
 
D
S
 
S
N
 
A
V
 
K
F
 
L
R
 
R
D
 
K
D
 
G
V
 
D
P
 
P
K
 
R
P
 
F
C
 
F
L
 
E
S
 
M
R
 
R
E
 
D
E
 
L
A
 
I
L
 
K
K
 
K
N
 
N
A
 
F
K
 
P
H
 
E
I
 
E
E
 
K
D
 
D
G
 
G
Y
 
H
F
 
I
K
 
K
G
 
V
P
 
P
R
 
G
V
 
I

Sites not aligning to the query:

Query Sequence

>WP_013683062.1 NCBI__GCF_000194625.1:WP_013683062.1
MITEEDVYKIAGLAKIEIKPEEVENFRKEFQSILEYFNILDEVTEDVEPTFHVLPISNVF
RDDVPKPCLSREEALKNAKHIEDGYFKGPRVVE

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory