Comparing WP_013722484.1 NCBI__GCF_000204645.1:WP_013722484.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
32% identity, 83% coverage: 68:572/605 of query aligns to 37:536/562 of 6ovtA
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
32% identity, 83% coverage: 68:572/605 of query aligns to 50:549/575 of P9WKJ5
9jpiA The complex structure of dhad with aspterric acid (aa). (see paper)
29% identity, 89% coverage: 68:603/605 of query aligns to 48:568/570 of 9jpiA
8hs0A The mutant structure of dhad v178w (see paper)
28% identity, 89% coverage: 68:603/605 of query aligns to 48:568/570 of 8hs0A
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
29% identity, 89% coverage: 68:603/605 of query aligns to 86:606/608 of Q9LIR4
8imuA Dihydroxyacid dehydratase (dhad) mutant-v497f (see paper)
28% identity, 89% coverage: 68:603/605 of query aligns to 45:521/523 of 8imuA
9evvD His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
29% identity, 88% coverage: 68:598/605 of query aligns to 41:573/575 of 9evvD
9evvA His579leu variant of l-arabinonate dehydratase co-crystallized with 2- oxobutyrate (see paper)
29% identity, 88% coverage: 68:598/605 of query aligns to 41:573/575 of 9evvA
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
29% identity, 88% coverage: 68:598/605 of query aligns to 45:577/579 of B5ZZ34
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
29% identity, 88% coverage: 68:598/605 of query aligns to 42:574/576 of 5j85A
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
30% identity, 83% coverage: 68:572/605 of query aligns to 37:528/569 of 8epzA
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg (see paper)
30% identity, 83% coverage: 68:572/605 of query aligns to 36:527/568 of 8ej0A
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
30% identity, 83% coverage: 68:571/605 of query aligns to 42:539/583 of Q1JUQ1
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus) (see 2 papers)
29% identity, 70% coverage: 147:571/605 of query aligns to 123:551/595 of Q9A9Z2
Sites not aligning to the query:
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
29% identity, 70% coverage: 147:571/605 of query aligns to 117:545/589 of 5oynA
Sites not aligning to the query:
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
29% identity, 70% coverage: 147:568/605 of query aligns to 112:538/587 of 7m3kA
Sites not aligning to the query:
>WP_013722484.1 NCBI__GCF_000204645.1:WP_013722484.1
MSSHETVHTVTERIRQRSAATRDAYLQQLESHARRDRGAARLGCANVAHAFAAMPGSDKL
RVVAQKAPNIGIVTSYNDMLSAHAPLASYPGLIKDEARRCGATAQVAGGVPAMCDGVTQG
TPGMELSLFSRDVIAMATAVALSHDVFDAALMLGVCDKIVPGLLVGALQFGYLPTVFVPA
GPMTSGLSNSAKAKVREQAAQGLVGRGELLQAEMAAYHSPGTCTFYGTANSNQMLLEAMG
LHVPGTAFVNPGHALREELTREAARTVLGSAGAPCPPIGRVVDERAIVNAMVALLATGGS
TNHLIHWVAVARAAGIVIDWDDFSALSAAVPLLARVYPNGSADVNRFQAAGGPGYVIREL
LDAGLMHEDVLTVRPGGIREYTRVPEGDAGQRLRWADVGASRDDSVLRPAADPFSATGGL
KLLSGNLGRSVIKVSAVPRDHHVVEAPARVFASQGELLQAFQAGELERDVVCVVRWQGPR
ANGMPELHKLTPPLAVLQGKGHKVALVTDGRMSGASGKVPAAIHASPEAHAGGPLARVRD
GDPIRLDAVAGTLDVLIDAAEWQARQPAAMPPGLHEDNAHGWGRELFAGFRRNALSAEEG
ACTWL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory