Comparing WP_013723214.1 NCBI__GCF_000204645.1:WP_013723214.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
3fijA Crystal structure of a uncharacterized protein lin1909
36% identity, 69% coverage: 38:240/293 of query aligns to 10:201/224 of 3fijA
P76038 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD; Gamma-Glu-GABA hydrolase; EC 3.5.1.94 from Escherichia coli (strain K12) (see paper)
31% identity, 85% coverage: 13:261/293 of query aligns to 10:244/254 of P76038
6vtvB Crystal structure of puud gamma-glutamyl-gamma-aminobutyrate hydrolase from e. Coli
31% identity, 85% coverage: 13:261/293 of query aligns to 8:242/252 of 6vtvB
O33341 Putative glutamine amidotransferase Rv2859c; EC 2.4.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
30% identity, 89% coverage: 8:269/293 of query aligns to 63:308/308 of O33341
7d50B Spua mutant - h221n with glutamyl-thioester (see paper)
34% identity, 67% coverage: 45:241/293 of query aligns to 38:230/255 of 7d50B
7d53A Spua mutant - h221n with glu (see paper)
34% identity, 67% coverage: 45:241/293 of query aligns to 32:224/249 of 7d53A
7d4rB Spua native structure (see paper)
38% identity, 45% coverage: 109:241/293 of query aligns to 60:192/215 of 7d4rB
>WP_013723214.1 NCBI__GCF_000204645.1:WP_013723214.1
MSALHPTASRLKIGLSACFSHADPGRSLFTNKTLQYVEQSIAHWIMSAGALVVMVPCPTG
ETARGDVTLKHYAEWLDGVVMHGGSDVWPGSYGEVPLKDAWLGDRVRDLYDLAVVEAFEQ
QGKPIFGVCRGLQLINVAFGGTLYQDIETQHPGAMQHRNATAYDQHFHEVDIVPGTRLAR
LYPGQPRVTVNSIHHQGIKNLAPGFDIEAWSYPDAVPEAIRRRHGHGRGYIAATQWHPEF
RAASGAMLDDTPLLHDFLAACADARARPRPGHSPLHIRDRAERLLRRALLRQR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory