Comparing WP_013818547.1 NCBI__GCF_000214665.1:WP_013818547.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
4wjiA Crystal structure of cyclohexadienyl dehydrogenase from sinorhizobium meliloti in complex with NADP and tyrosine
41% identity, 100% coverage: 2:292/292 of query aligns to 4:292/293 of 4wjiA
3gggD The crystal structure of a. Aeolicus prephenate dehydrogenase in complex with tyrosine and NAD+ (see paper)
35% identity, 97% coverage: 2:283/292 of query aligns to 13:290/293 of 3gggD
3ggoA Crystal structure of prephenate dehydrogenase from a. Aeolicus with hpp and nadh (see paper)
35% identity, 97% coverage: 2:283/292 of query aligns to 5:282/285 of 3ggoA
3ggpA Crystal structure of prephenate dehydrogenase from a. Aeolicus in complex with hydroxyphenyl propionate and NAD+ (see paper)
35% identity, 97% coverage: 2:283/292 of query aligns to 5:282/286 of 3ggpA
5uyyA Crystal structure of prephenate dehydrogenase tyra from bacillus anthracis in complex with l-tyrosine (see paper)
33% identity, 97% coverage: 1:283/292 of query aligns to 8:287/373 of 5uyyA
Sites not aligning to the query:
6u60B Crystal structure of prephenate dehydrogenase tyra from bacillus anthracis in complex with NAD and l-tyrosine (see paper)
33% identity, 96% coverage: 3:283/292 of query aligns to 2:279/365 of 6u60B
Sites not aligning to the query:
3b1fA Crystal structure of prephenate dehydrogenase from streptococcus mutans (see paper)
29% identity, 97% coverage: 3:284/292 of query aligns to 7:283/286 of 3b1fA
2f1kA Crystal structure of synechocystis arogenate dehydrogenase (see paper)
26% identity, 98% coverage: 4:288/292 of query aligns to 2:279/279 of 2f1kA
>WP_013818547.1 NCBI__GCF_000214665.1:WP_013818547.1
MFKRLCVIGTGLIGGSIARAARAQGLCEEIVAFGGREKNLPNLQLAQQLGVIDRFYTDMG
QALAEADLVIVATPVGSMRNIFELIKPHWHPQALYSDAGSTKGSVVAAVEAAFGHVPNNF
VPAHPIAGAERSGVDASQADLFKNRRLIITPLENTDRQFVEKLSNFWRQIGSSVSLMSVE
HHDTVLAATSHLPHILAFTLVGLLGRKDEQREIFKYAAGGFKDFSRIASSDPTMWQDICL
ANKREIIPLIQQFKAELSHIEQLLTNDQAEQLFDTFTYARDARQRFLDTFDD
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory