Comparing WP_013842627.1 NCBI__GCF_000215085.1:WP_013842627.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 5 hits to proteins with known functional sites (download)
7bkbB Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) (see paper)
24% identity, 55% coverage: 177:416/433 of query aligns to 2:263/296 of 7bkbB
5odqB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with bromoethanesulfonate. (see paper)
23% identity, 55% coverage: 178:415/433 of query aligns to 2:264/291 of 5odqB
5odhH Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes (see paper)
23% identity, 55% coverage: 178:415/433 of query aligns to 2:264/291 of 5odhH
5odhB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes (see paper)
23% identity, 55% coverage: 178:415/433 of query aligns to 2:264/291 of 5odhB
5odcB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus at 2.3 a resolution (see paper)
23% identity, 55% coverage: 178:415/433 of query aligns to 2:264/291 of 5odcB
>WP_013842627.1 NCBI__GCF_000215085.1:WP_013842627.1
MSIYDGLKEIEEELMKCMKCGNCQAVCPIYKETRAEASVARGKLKLAEAILKGEIGYTPG
IAKRFDLCLTCEACSANCPCGVKVHEVILAARAELARQKGLPTAKKAAFNLLRHPKLFDL
GLRVGGKFQGLAFKRKKKGMSPRFPIGLESRRVLPSLAEKPLKSLIPEESKVKQPRRKVA
FFSGCVTNYIYTSVGQAVVEVLNYNDIDVVFPKEQHCCGAPALINGDVECAREMAKSHVD
LFSKLDVEAIITICGTCGESFKEKYGQLLEKDPIYAGKAKAIAQKTYDISEYLVDVLKVD
FSKLGPVDMTFTYHEPCHLGRGLGITRQPLEILQNIPGLIYKPLKAPNRCCGGAGSFSLT
NYPMSYQILGKKLEDIQGTGADTVITGCGSCRMQLEDGLAQEKMGQNVMHIIEVVHKAYQ
NRQQKKDPAQKAG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory