Comparing WP_013843281.1 NCBI__GCF_000215085.1:WP_013843281.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 5 hits to proteins with known functional sites (download)
5odqB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with bromoethanesulfonate. (see paper)
26% identity, 31% coverage: 474:691/714 of query aligns to 2:241/291 of 5odqB
5odhH Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes (see paper)
26% identity, 31% coverage: 474:691/714 of query aligns to 2:241/291 of 5odhH
5odhB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 3.5 minutes (see paper)
26% identity, 31% coverage: 474:691/714 of query aligns to 2:241/291 of 5odhB
5odcB Heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus at 2.3 a resolution (see paper)
26% identity, 31% coverage: 474:691/714 of query aligns to 2:241/291 of 5odcB
7bkbB Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) (see paper)
26% identity, 33% coverage: 477:711/714 of query aligns to 6:271/296 of 7bkbB
>WP_013843281.1 NCBI__GCF_000215085.1:WP_013843281.1
MAAQNLKQNIQSALQNDNLKGALGRFGEAYPASREKAYEGKDFEVIREQISEIKRSAAER
MDELADQFAAQAEKNGAIVFRAKTAREAKEYIGQIAKKHNVKTIIKSKSMASEEIHLNEY
LLEQGIPEVAESDLGEWIIQLCGQRPSHMVMPAIHMTRGEVAEIFSKEVQEDLEPDIPKL
VKVARENLRNKFLRAEMGISGANIAVAETGTIVMCTNEGNGRLTTTVPPVHVVLVGLEKL
VARFQDVGPILEALPRSATGQKLTSYVTMMTGPTAAIDLDGELIEQKEMHIVLLDNGRTE
MRNDPVFKQALQCIRCASCLNVCPVFQQVGGHVYGDVYTGGIGTILTAFLNSFDKAGELQ
NLCLRCERCKAFCPGKIDLPSLIVELRRRTVKKEGLPTGQKLILEKVLTNRRLFHSLIRT
ASLAQKPFVKGNMIRHLPLFFSGLTEGRSLPSVAATPLRDKVGHSVPEGKAKARVGFFAG
CLGDFVYPEQGEAAYKILHKMGMEIVFPAEQSCCGIPASQMGAPEVAVILAKQNIEAFEK
EQVDYILSLCPTCVEVLKHHYVDHLKDDPAWKERAEKLAAKVVDFPTFVARQGKDLQFNK
LFSSVTYHDSCHMKRALGVWQEPRELLTKAGVKLVEMKGCDECCGFGGSYSIKMPEISKA
ILDKKITNTKASGAEILALDCPGCKMQISGGLDAQGDRMTVKHTAELLAEALKE
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory