SitesBLAST
Comparing WP_014147654.1 NCBI__GCF_000968535.2:WP_014147654.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P31005 NAD-dependent methanol dehydrogenase; MDH; MEDH; Type 3 alcohol dehydrogenase; EC 1.1.1.244 from Bacillus methanolicus (see 3 papers)
29% identity, 97% coverage: 12:397/397 of query aligns to 8:381/381 of P31005
- G13 (= G17) mutation to A: Shows a reduced dehydrogenase activity.
- G15 (= G19) mutation to A: Shows almost the same dehydrogenase activity as the wild-type.
- D88 (≠ A91) mutation to N: Shows almost the same dehydrogenase activity as the wild-type.
- G95 (= G98) mutation to A: Shows a 10-fold decreased affinity for NAD and NADH and a strongly reduced dehydrogenase activity. Completely insensitive to the stimulating effect of the activator protein Act.
- S97 (= S100) mutation to G: Shows an increase of the dehydrogenase activity and a decrease of the affinity for NAD and NADH. Completely insensitive to the stimulating effect of the activator protein Act. It does not bind NAD.; mutation to T: Shows an increase of the dehydrogenase activity and affinity for NAD and NADH.
- D100 (= D103) mutation to N: Loss of dehydrogenase activity. It still binds NADH.
- K103 (= K106) mutation to R: Loss of dehydrogenase activity. It does not bind NADH.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
6jkpA Crystal structure of sulfoacetaldehyde reductase from bifidobacterium kashiwanohense in complex with NAD+ (see paper)
28% identity, 96% coverage: 14:394/397 of query aligns to 12:370/376 of 6jkpA
- binding nicotinamide-adenine-dinucleotide: F42 (= F53), G96 (= G99), D100 (= D103), T137 (= T143), T138 (= T144), T141 (= T147), S143 (= S149), T146 (= T152), S181 (= S188), V182 (≠ C189), P183 (= P190)
6jkoA Crystal structure of sulfoacetaldehyde reductase from bifidobacterium kashiwanohense (see paper)
28% identity, 96% coverage: 14:394/397 of query aligns to 12:370/376 of 6jkoA
5br4A E. Coli lactaldehyde reductase (fuco) m185c mutant (see paper)
28% identity, 88% coverage: 16:365/397 of query aligns to 14:350/385 of 5br4A
- binding nicotinamide-adenine-dinucleotide: D39 (≠ K41), T41 (≠ S43), L42 (≠ F44), P70 (≠ G71), G97 (= G98), G98 (= G99), S99 (= S100), D102 (= D103), T140 (= T143), T141 (= T144), T144 (= T147), T149 (= T152), N151 (= N154), V153 (= V156), K162 (≠ S168), G184 (≠ S188), C185 (= C189), L189 (= L193), H277 (= H285)
- binding zinc ion: D196 (= D200), H200 (≠ Q204), H263 (= H271), H277 (= H285)
3bfjA Crystal structure analysis of 1,3-propanediol oxidoreductase (see paper)
31% identity, 92% coverage: 32:395/397 of query aligns to 30:380/382 of 3bfjA
5yvrA Crystal structure of the h277a mutant of adh/d1, an archaeal halo- thermophilic red sea brine pool alcohol dehydrogenase (see paper)
27% identity, 100% coverage: 1:397/397 of query aligns to 4:403/403 of 5yvrA
- binding manganese (ii) ion: D207 (= D200), H211 (≠ Q204), H276 (= H271), H291 (= H285)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: G41 (= G40), S43 (≠ Q42), N44 (≠ S43), M45 (≠ F44), G100 (= G98), G101 (= G99), S102 (= S100), D105 (= D103), S151 (≠ T143), T152 (= T144), T155 (= T147), T160 (= T152), Y162 (≠ N154), V164 (= V156), K173 (= K166), E195 (≠ S188), M196 (≠ C189), L200 (= L193), D207 (= D200), H211 (≠ Q204), H291 (= H285)
5yvmA Crystal structure of the archaeal halo-thermophilic red sea brine pool alcohol dehydrogenase adh/d1 bound to nzq (see paper)
27% identity, 100% coverage: 1:397/397 of query aligns to 4:403/403 of 5yvmA
- binding manganese (ii) ion: D207 (= D200), H211 (≠ Q204), H276 (= H271), H291 (= H285)
- binding 5,6-dihydroxy-nadp: G41 (= G40), N44 (≠ S43), M45 (≠ F44), P73 (≠ G71), N74 (≠ E72), G100 (= G98), G101 (= G99), S102 (= S100), D105 (= D103), S151 (≠ T143), T152 (= T144), T155 (= T147), T160 (= T152), Y162 (≠ N154), V164 (= V156), K173 (= K166), E195 (≠ S188), L200 (= L193), H211 (≠ Q204), H276 (= H271), H280 (≠ S275), H291 (= H285)
7qlgAAA Lactaldehyde reductase (see paper)
27% identity, 88% coverage: 16:365/397 of query aligns to 12:348/383 of 7qlgAAA
- binding fe (iii) ion: D194 (= D200), H198 (≠ Q204), H261 (= H271), H275 (= H285)
- binding 1,4-dihydronicotinamide adenine dinucleotide: D37 (≠ K41), T39 (≠ S43), L40 (≠ F44), N69 (≠ E72), G95 (= G98), G96 (= G99), S97 (= S100), D100 (= D103), T138 (= T143), T139 (= T144), T142 (= T147), T147 (= T152), N149 (= N154), K160 (≠ S168), L187 (= L193), H198 (≠ Q204), H275 (= H285)
3ox4A Structures of iron-dependent alcohol dehydrogenase 2 from zymomonas mobilis zm4 complexed with NAD cofactor (see paper)
33% identity, 56% coverage: 87:310/397 of query aligns to 85:301/382 of 3ox4A
- binding fe (ii) ion: D193 (= D200), H197 (≠ Q204), H262 (= H271), H276 (= H285)
- binding nicotinamide-adenine-dinucleotide: G96 (= G98), G97 (= G99), S98 (= S100), T137 (= T143), T138 (= T144), F148 (≠ N154), I150 (≠ V156), G181 (≠ S188), M182 (≠ C189), L186 (= L193), H276 (= H285)
Sites not aligning to the query:
3owoA Structures of iron-dependent alcohol dehydrogenase 2 from zymomonas mobilis zm4 with and without NAD cofactor (see paper)
33% identity, 56% coverage: 87:310/397 of query aligns to 85:301/382 of 3owoA
P0DJA2 Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) (see 2 papers)
33% identity, 56% coverage: 87:310/397 of query aligns to 86:302/383 of P0DJA2
- G98 (= G99) binding NAD(+)
- S99 (= S100) binding NAD(+)
- T138 (= T143) binding NAD(+)
- T139 (= T144) binding NAD(+)
- T147 (= T152) binding NAD(+)
- F149 (≠ N154) binding NAD(+)
- K160 (= K166) binding NAD(+)
- L179 (= L185) binding NAD(+)
- G182 (≠ S188) binding NAD(+)
- M183 (≠ C189) binding NAD(+)
- D194 (= D200) binding Fe(2+)
- H198 (≠ Q204) binding Fe(2+)
- H263 (= H271) binding Fe(2+)
- H267 (≠ S275) binding NAD(+)
- H277 (= H285) binding Fe(2+); binding NAD(+)
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 39 binding NAD(+)
- 71 binding NAD(+)
3zdrA Structure of the alcohol dehydrogenase (adh) domain of a bifunctional adhe dehydrogenase from geobacillus thermoglucosidasius ncimb 11955 (see paper)
30% identity, 73% coverage: 64:353/397 of query aligns to 57:350/403 of 3zdrA
2bi4A Lactaldehyde:1,2-propanediol oxidoreductase of escherichia coli (see paper)
28% identity, 88% coverage: 16:365/397 of query aligns to 13:349/382 of 2bi4A
- binding fe (iii) ion: D195 (= D200), H199 (≠ Q204), H262 (= H271), H276 (= H285)
- binding nicotinamide-adenine-dinucleotide: D38 (≠ K41), T40 (≠ S43), L41 (≠ F44), G96 (= G98), G97 (= G99), S98 (= S100), T139 (= T143), T140 (= T144), V152 (= V156), K161 (≠ S168), G183 (≠ S188), M184 (≠ C189), L188 (= L193), D195 (= D200), H199 (≠ Q204), H262 (= H271), H276 (= H285)
P0A9S1 Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli (strain K12) (see paper)
28% identity, 88% coverage: 16:365/397 of query aligns to 13:349/382 of P0A9S1
- G16 (= G19) mutation to D: No effect on enzyme activity.
- D38 (≠ K41) mutation to G: Enzyme can now use NADP.
- G96 (= G98) mutation to E: Loss of NAD binding and enzyme activity.
- D195 (= D200) mutation to L: Complete loss of iron-binding.
- H199 (≠ Q204) mutation H->A,F: Complete loss of iron-binding.
Sites not aligning to the query:
- 1:9 MANRMILNE→M: Loss of enzyme activity, loss of dimerization.
1rrmA Crystal structure of lactaldehyde reductase
28% identity, 88% coverage: 16:365/397 of query aligns to 13:349/385 of 1rrmA
- binding adenosine-5-diphosphoribose: D38 (≠ K41), T40 (≠ S43), L41 (≠ F44), N70 (≠ E72), G96 (= G98), G97 (= G99), S98 (= S100), T139 (= T143), T140 (= T144), T143 (= T147), V152 (= V156), K161 (≠ S168), G183 (≠ S188), M184 (≠ C189), L188 (= L193), H276 (= H285)
- binding fe (ii) ion: L258 (= L267)
- binding zinc ion: D195 (= D200), H199 (≠ Q204), H262 (= H271), H276 (= H285)
Sites not aligning to the query:
7bvpA Adhe spirosome in extended conformation (see paper)
32% identity, 69% coverage: 92:365/397 of query aligns to 539:825/869 of 7bvpA
- binding nicotinamide-adenine-dinucleotide: S547 (= S100), D550 (= D103), T597 (= T143), T598 (= T144), T601 (= T147), V610 (= V156), K619 (= K166), L646 (= L193), H737 (= H285)
- binding zinc ion: D653 (= D200), H657 (≠ Q204), H723 (= H271), H737 (= H285)
Sites not aligning to the query:
- binding nicotinamide-adenine-dinucleotide: 112, 113, 139, 194, 195, 198, 212, 213, 214, 246, 335, 337, 367, 418, 419, 487, 489, 519
6tqmA Escherichia coli adhe structure in its compact conformation (see paper)
32% identity, 69% coverage: 92:365/397 of query aligns to 539:825/869 of 6tqmA
- binding fe (iii) ion: D653 (= D200), H657 (≠ Q204), H723 (= H271), H737 (= H285)
- binding [[(2R,3S,4R,5R)-5-[(3R)-3-aminocarbonyl-3,4-dihydro-2H-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanidyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphate: G545 (= G98), S547 (= S100), D550 (= D103), T597 (= T143), S603 (= S149), F608 (≠ N154), L646 (= L193), H727 (≠ S275)
Sites not aligning to the query:
- binding [[(2R,3S,4R,5R)-5-[(3R)-3-aminocarbonyl-3,4-dihydro-2H-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanidyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphate: 487, 490
P0A9Q7 Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli (strain K12) (see 8 papers)
32% identity, 69% coverage: 92:365/397 of query aligns to 539:825/891 of P0A9Q7
- GSPMD 546:550 (≠ GSVLD 99:103) binding NAD(+)
- E568 (≠ H121) mutation to K: Partially restores protein stability and resistance to MCO damage; when associated with T-267.
- V610 (= V156) binding NAD(+)
- K619 (= K166) binding NAD(+)
- D653 (= D200) binding Fe cation
- H657 (≠ Q204) binding Fe cation
- F670 (= F217) mutation F->A,E,V: Disrupts spirosome formation. Affects the forward activity of ALDH.
- H723 (= H271) binding Fe cation
- H737 (= H285) binding Fe cation
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
- 110:115 binding NAD(+)
- 195 binding NAD(+)
- 213 binding NAD(+)
- 267 A→T: Shows aerobic growth ability on ethanol. Shows 5-6 fold increase in acetaldehyde dehydrogenase activity, but does not affect ethanol dehydrogenase activity. Shows decreased thermal enzyme stability and increased sensitivity to MCO damage. Shows increased protein stability and resistance to MCO; when associated with K-568.
- 335 binding NAD(+)
- 358 modified: N6-acetyllysine
- 419 binding NAD(+)
- 446:449 mutation Missing: Can form dimers, but does not assemble into long filaments. Strongly affects ALDH activity, but not ADH activity.
- 487 binding NAD(+)
- 519 binding NAD(+)
P0A9Q8 Bifunctional aldehyde-alcohol dehydrogenase AdhE; Alcohol dehydrogenase E; EC 1.2.1.10; EC 1.1.1.1 from Escherichia coli O157:H7 (see paper)
32% identity, 69% coverage: 92:365/397 of query aligns to 539:825/891 of P0A9Q8
- GSPMD 546:550 (≠ GSVLD 99:103) binding NAD(+)
- TT 597:598 (= TT 143:144) binding NAD(+)
- L638 (= L185) binding NAD(+)
- D653 (= D200) binding Fe cation
- H657 (≠ Q204) binding Fe cation
- H723 (= H271) binding Fe cation
- H737 (= H285) binding Fe cation
Sites not aligning to the query:
- 487 binding NAD(+)
- 519 binding NAD(+)
1vhdA Crystal structure of an iron containing alcohol dehydrogenase (see paper)
31% identity, 76% coverage: 32:331/397 of query aligns to 29:313/361 of 1vhdA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: S39 (≠ Q42), S40 (= S43), E69 (≠ G71), N70 (≠ E72), G96 (= G98), G97 (= G99), S98 (= S100), D101 (= D103), T137 (= T143), T138 (= T144), T141 (= T147), S143 (= S149), T146 (= T152), Y148 (≠ N154), I150 (≠ V156), K158 (= K166), S178 (= S188), M179 (≠ C189), L183 (= L193), D190 (= D200), H194 (≠ Q204), H271 (= H285)
- binding zinc ion: D190 (= D200), H194 (≠ Q204), H257 (= H271), H271 (= H285)
Query Sequence
>WP_014147654.1 NCBI__GCF_000968535.2:WP_014147654.1
MQFKPFSISRLPRISYGRGRLSEVPALTASYGGNALLVTGKQSFCGTERWPSFIESLEMQ
GVRWLHVTVSGEPSPELVDLTVSRFCDETIAVVVGIGGGSVLDAAKAIAGLLPHGNSVMD
HLEGVGRNIPYRGPSIPFIAVPTTAGTGSEATKNSVLSVQGPEGFKKSFRDECLIPEYAV
IDPDLLESCPRDLIAADGMDAFTQLLESYVSLKANPFIDALAWSGMTAFKEGFFAAWEGQ
EPEAANGRAAMAYASLLSGITLAQVGLGSVHGLASPLGAFFPIPHGVVCGTMVAAATEIN
IEAMQAREPDNPALAKYAQVGRLLTGRNDIGDSVVRDLLIALLAEWSKTLQLPRLRDYGI
READFAKIVANSRGSSMKTNPIVLTDTEIEAILQRRL
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory