Comparing WP_015798108.1 NCBI__GCF_000023265.1:WP_015798108.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3jtxB Crystal structure of aminotransferase (np_283882.1) from neisseria meningitidis z2491 at 1.91 a resolution
32% identity, 86% coverage: 22:331/361 of query aligns to 32:353/393 of 3jtxB
6l1nA Substrate bound bacf structure from bacillus subtillis (see paper)
26% identity, 93% coverage: 21:357/361 of query aligns to 33:382/393 of 6l1nA
Sites not aligning to the query:
6l1lB Apo-bacf structure from bacillus subtillis (see paper)
26% identity, 93% coverage: 21:357/361 of query aligns to 34:383/393 of 6l1lB
6l1oB Product bound bacf structure from bacillus subtillis (see paper)
26% identity, 93% coverage: 21:357/361 of query aligns to 34:383/392 of 6l1oB
Sites not aligning to the query:
2x5dD Crystal structure of a probable aminotransferase from pseudomonas aeruginosa (see paper)
27% identity, 91% coverage: 9:336/361 of query aligns to 7:347/380 of 2x5dD
2o1bA Structure of aminotransferase from staphylococcus aureus
25% identity, 92% coverage: 21:352/361 of query aligns to 21:362/376 of 2o1bA
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
26% identity, 96% coverage: 7:354/361 of query aligns to 5:375/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
26% identity, 96% coverage: 7:354/361 of query aligns to 5:375/388 of 1gd9A
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
29% identity, 87% coverage: 43:357/361 of query aligns to 58:377/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
29% identity, 87% coverage: 43:357/361 of query aligns to 58:377/382 of 1gc3A
Sites not aligning to the query:
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
29% identity, 87% coverage: 43:357/361 of query aligns to 58:377/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
29% identity, 87% coverage: 43:357/361 of query aligns to 58:377/382 of 1bjwA
Sites not aligning to the query:
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
29% identity, 87% coverage: 43:357/361 of query aligns to 58:377/385 of Q56232
Sites not aligning to the query:
Q58097 (5-formylfuran-3-yl)methyl phosphate transaminase; 4-HFC-P:alanine aminotransferase; EC 2.6.1.108 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
26% identity, 89% coverage: 21:343/361 of query aligns to 31:349/370 of Q58097
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
29% identity, 87% coverage: 43:357/361 of query aligns to 58:377/382 of 1b5oA
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
23% identity, 84% coverage: 50:351/361 of query aligns to 68:384/402 of P14909
Sites not aligning to the query:
1v2fA Crystal structure of t.Th hb8 glutamine aminotransferase complex with 3-phenylpropionate (see paper)
30% identity, 94% coverage: 22:359/361 of query aligns to 28:365/368 of 1v2fA
Sites not aligning to the query:
1v2eA Crystal structure of t.Th hb8 glutamine aminotransferase complex with a-keto-g-methylthiobutyrate (see paper)
30% identity, 94% coverage: 22:359/361 of query aligns to 28:365/368 of 1v2eA
Sites not aligning to the query:
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
25% identity, 85% coverage: 50:357/361 of query aligns to 62:391/399 of 5wmhA
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
25% identity, 85% coverage: 50:357/361 of query aligns to 62:391/402 of 5wmiA
Sites not aligning to the query:
>WP_015798108.1 NCBI__GCF_000023265.1:WP_015798108.1
MSQRPSRVELTALAADRHPFVVDASIGSPVDPPPAFVPHLLACQGEERAYPPAAGTPALV
ESATRWFHALRGVTLPDGAVAPTMGSKEAIGTLAWLLRERRPDRGVVLIPGRAYPTYAEG
ARAAGCEIVRVPDDCSGAPAFDAVAASVWDRTLVAWVNSPSNPTGAVYDPGPVVALAREH
GAVLASDEAYGDFVWSGEAPSALRAGLEGTLALVSLSKRSNLAGLRLGLVAGDPMLVDEV
VARRRALGLLASGPSQAVAAEALADEGHVAEQRSRYAGRLRRLARVIEAVADVPVRVPDG
GIYLWVRAPDDDGAAFARWLATRLGIVVADGADYGDRAFVRIAATVKDRAIDALWERGGV
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Lawrence Berkeley National Laboratory