SitesBLAST

SitesBLAST – Find functional sites

SitesBLAST

Comparing WP_015799853.1 NCBI__GCF_000022745.1:WP_015799853.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 20 (the maximum) hits to proteins with known functional sites (download)

8bitA Crystal structure of acyl-coa synthetase from metallosphaera sedula in complex with coenzyme a and acetyl-amp
38% identity, 86% coverage: 66:541/556 of query aligns to 70:540/562 of 8bitA

query
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binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: W252 (≠ Y254), G321 (= G323), E322 (= E324), P323 (= P325), D342 (= D344), F343 (≠ H345), Y344 (= Y346), Q346 (= Q348), T347 (= T349), D428 (= D429), F440 (= F441), K449 (≠ T450), R454 (= R455)
binding coenzyme a: N128 (≠ A124), W247 (= W249), K249 (≠ Y251), K273 (≠ G273), L274 (≠ F274), Q300 (≠ L300), D452 (≠ G453), Y453 (= Y454), R483 (= R484), P517 (≠ A518)

8biqA Crystal structure of acyl-coa synthetase from metallosphaera sedula in complex with acetyl-amp
38% identity, 86% coverage: 66:541/556 of query aligns to 69:539/562 of 8biqA

query
sites
8biqA

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binding adenosine monophosphate: G320 (= G323), E321 (= E324), P322 (= P325), G344 (= G347), Q345 (= Q348), T346 (= T349), D427 (= D429), F439 (= F441), K448 (≠ T450), R453 (= R455)

8biqB Crystal structure of acyl-coa synthetase from metallosphaera sedula in complex with acetyl-amp
38% identity, 86% coverage: 66:541/556 of query aligns to 68:538/561 of 8biqB

query
sites
8biqB

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R

D
|
D

H
x
F

Y
|
Y

G
|
G

Q
|
Q

T
|
T

E

E

L

T

G

T

M

A

V

M

V

V

N

G

N

N

H

F

H

P

G

F

L

L

E

K

H

-

P

-

V

V

R

K

Q

P

G

G

S

S

A

M

G

G

Y

K

A

P

M

H

P

P

G

L

Y

Y

R

D

V

I

A

R

V

L

L

L

D

D

E

D

A

E

G

G

K

K

E

E

V

I

-

T

G

K

P

P

N

Y

E

E

P

V

G

G

V

H

L

I

A

T

I

V

D

K

I

L

D

N

N

P

S

R

P

P

L

I

L

G

W

L

F

F

T

L

G

G

Y

Y

Y

S

-

D

-

E

K

K

K

K

D

N

T

M

P

E

S

S

I

F

S

R

S

E

G

G

Y

Y

Y

Y

R

Y

T

T

G

G

D
|
D

T

K

V

A

E

Y

F

F

E

D

P

E

D

E

G

G

S

Y

I

F

S

Y

F
|
F

I

V

G

G

R

R

A

G

D

D

D

D

V

V

I

I

T
x
K

S

T

S

S

G

D

Y

Y

R
|
R

I

V

G

G

P

P

F

F

D

E

V

V

E

E

S

S

A

A

L

L

L

L

E

E

H

H

P

P

A

A

V

V

N

A

E

E

A

A

A

A

V

V

V

V

G

G

V

V

P

P

D

D

P

T

Q

V

R

R

T

W

E

Q

I

L

V

V

K

K

A

A

F

Y

V

I

I

V

L

L

A

K

P

K

G

G

F

Y

E

M

G

P

T

S

P

K

E

E

L

L

A

A

E

E

E

E

L

I

A

R

L

E

H

K

V

M

K

K

K

T

Q

L

L

L

S

S

A

P

H

Y

A

K

Y

V

P

P

R

R

Q

I

I

I

D

E

F

F

V

V

A

D

E

E

L

L

P

P

K

K

T

T

P

I

S

S

G

G

K

K

I

I

Q

R

R

R

binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: G319 (= G323), E320 (= E324), P321 (= P325), D340 (= D344), F341 (≠ H345), Y342 (= Y346), G343 (= G347), Q344 (= Q348), T345 (= T349), D426 (= D429), F438 (= F441), K447 (≠ T450), R452 (= R455)

8rplB Amp-forming acetyl-coa synthetase from chloroflexota bacterium with bound acetyl amp (see paper)
32% identity, 93% coverage: 34:549/556 of query aligns to 76:622/630 of 8rplB

query
sites
8rplB

D

D

T

G

G

K

I

F

N

N

A

I

C

A

I

Y

E

N

C

C

C

L

D

D

R

R

Y

Y

T

M

G

G

-

T

-

P

-

I

E

E

N

D

R

K

V

V

A

A

L

F

R

Y

A

W

I

E

S

G

I

D

D

D

N

G

T

S

L

S

T

R

E

A

L

Y

T

T

F

Y

E

K

D

E

L

M

R

Y

D

V

M

L

S

T

A

N

R

R

V

V

G

A

N

K

M

V

L

L

A

Q

D

N

A

Q

G

G

I

V

S

K

A

K

G

G

D

D

V

R

V

V

A

A

G

I

L

Y

L

M

P

P

R

M

T

I

P

P

E

E

L

M

V

A

A

A

T

S

I

V

L

L

G

A

A

C

W

A

R

R

I

L

G

G

A

A

I

P

Y

H

Q

M

P

V

L

V

F

F

T

G

A

G

F

F

G

A

P

A

K

S

A

S

I

L

E

R

Q

D

R

R

F

M

G

N

T

D

S

C

G

D

A

A

K

K

L

V

V

L

V

I

T

T

-

A

-

D

-

G

-

G

-

Y

-

R

-

G

-

G

N

K

L

V

A

I

N

E

R

L

S

K

K

K

L

I

A

A

E

D

-

E

-

A

V

V

E

A

N

E

C

T

P

P

R

T

V

I

A

E

T

K

I

V

L

F

A

V

P

Q

G

R

E

H

S

T

-

G

-

F

-

E

-

V

-

P

L

M

P

A

E

E

G

G

-

R

-

D

-

V

-

Y

-

L

D

D

I

V

D

L

F

L

R

N

A

D

A

I

V

P

A

E

A

D

A

T

S

V

T

V

E

P

C

C

E

E

P

P

V

V

M

-

R

-

K

D

G

S

S

E

D

D

L

M

F

L

M

Y

M

I

M

L

S

Y

T

T

S

S

G

G

T

S

A

T

G

G

L

K

P

P

K

K

G

G

V

V

P

-

V

V

P

H

L

V

R

H

A

G

L

G

M

Y

A

A

F

V

G

G

A

C

Y

Y

-

A

-

T

M

T

R

K

D

F

A

V

V

F

G

D

L

I

R

K

S

P

D

S

D

D

I

V

F

F

W

W

N

C

I

T

A

A

D

D

P

I

G

G

W

W

A

V

Y

T

G

G

L

H

Y

S

Y

Y

A

T

V

I

T

Y

G

G

P

P

L

M

L

M

L

N

G

A

V

A

P

S

T

I

I

V

L

L

N

F

E

E

G

G

G

I

F

P

T

T

-

Y

-

P

-

A

A

A

E

D

N

R

T

F

Y

W

D

S

I

I

I

V

E

E

R

K

L

Y

G

K

V

V

T

N

S

I

L

I

A

Y

G

T

S

A

P

P

T

T

A

A

F

I

R

R

L

S

L

L

M

M

A

R

A

F

G

G

P

E

E

E

S

L

A

P

A

A

R

R

V

H

K

D

-

L

G

S

R

S

L

L

R

R

V

I

V

L

S

G

S

T

A

V

G
|
G

E
|
E

P
|
P

L

I

N

N

P

P

E

E

V

A

I

W

R

M

W

W

F

Y

D

R

A

K

C

N

L

I

G

G

A

H

-

N

-

E

-

L

P

P

I

I

H

M

D

D

H
x
T

Y
x
W

G
x
W

Q
|
Q

T
|
T

E

E

L

T

G

G

M

M

V

I

V

L

N

I

N

S

H

P

H

T

G

P

L

I

E

-

H

L

P

P

V

L

R

K

Q

P

G

G

S

S

A

A

G

S

Y

R

A

P

M

L

P

P

G

T

Y

I

R

E

V

A

A

D

V

V

L

V

D

N

E

K

A

D

G

G

K

K

E

P

V

V

G

G

P

P

N

E

E

H

P

G

G

G

V

F

L

L

A

I

I

I

-

R

-

H

-

P

-

W

-

P

-

A

-

Q

-

M

-

R

-

T

-

I

-

F

-

G

D

D

I

P

D

D

N

R

S

Y

P

K

L

T

L

Y

W

W

F

E

T

T

G

-

Y

-

Y

-

K

-

K

-

D

-

T

I

P

P

S

D

I

V

S

-

S

-

G

-

Y

-

Y

Y

R

F

T

A

G

G

D
|
D

T

A

V

A

E

T

F

M

E

D

P

K

D

M

G

G

S

Y

I

F

S

R

F

I

I

Q

G

G

R
|
R

A

V

D

D

D

D

V

V

I

I

T
x
K

S

V

S

S

G

G

Y

H

R
|
R

I

L

G

G

P

S

F

M

D

E

V

I

E

E

S

S

A

S

L

L

L
x
V

E

S

H
|
H

P

P

A

A

V

V

N

A

E

E

A

A

A

A

V

A

V

I

G

G

V

K

P

P

D

D

P

E

Q

V

R

K

T

G

E

E

I

H

V

V

K

K

A

V

F

F

V

V

I

I

L

L

A

R

P

N

G

G

F

V

E

E

G

P

T

T

P

E

E

S

L

L

A

A

E

V

E

E

L

L

A

K

L

R

H

H

V

V

K

R

K

T

Q

L

L

V

S

G

A

P

H

L

A

A

Y

T

P

P

R

D

Q

E

I

L

D

E

F

F

V

V

A

T

E

S

L

L

P

P

K

K

T

T

P

R

S

S

G

G

K

K

I

I

Q

M

R

R

F

R

L

V

L

V

R

R

K

A

A

R

E

E

V

L

binding [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate: G391 (= G323), E392 (= E324), P393 (= P325), T416 (≠ H345), W417 (≠ Y346), W418 (≠ G347), Q419 (= Q348), T420 (= T349), D502 (= D429), R517 (= R444), K523 (≠ T450), R528 (= R455)
binding magnesium ion: V539 (≠ L466), H541 (= H468)

3eq6A Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in a ternary complex with products (see paper)
35% identity, 87% coverage: 68:548/556 of query aligns to 46:531/533 of 3eq6A

query
sites
3eq6A

T

N

F

F

E

R

D

E

L

L

R

S

D

E

M

N

S

S

A

Q

R

Q

V

A

G

A

N

N

M

V

L

L

A

S

D

G

A

A

-

C

G

G

I

L

S

Q

A

R

G

G

D

D

V

R

V

V

A

A

G

V

L

V

L

L

P

P

R

R

T

V

P

P

E

E

L

W

V

W

A

L

T

V

I

I

L

L

G

G

A

C

W

I

R

R

I

A

G

G

A

L

I

I

Y

F

Q

M

P

P

L

G

F

T

T

I

A

Q

F

M

G

K

P

S

K

T

A

D

I

I

E

L

Q

Y

R

R

F

L

G

Q

T

M

S

S

G

K

A

A

K

K

L

A

V

I

V

V

T

-

N

-

L

-

A

A

N

G

R

D

S

E

K

V

L

I

A

Q

E

E

V

V

E

D

N

T

-

V

-

A

-

S

-

E

C

C

P

P

R

S

V

L

A

R

T

I

I

K

L

L

A

L

P

V

G

S

E

E

S

K

L

S

P

C

E

D

G

G

D

W

I

L

D

N

F

F

R

K

A

K

A

L

V

L

A

N

A

E

A

A

S

S

T

T

E

T

C

H

E

H

P

C

V

V

M

E

R

T

K

G

G

S

S

Q

D

E

L

A

F

S

M

A

M

I

M

Y

S

F

T
|
T

S

S

G

G

T

T

A

S

G

G

L

L

P

P

K

K

G

M

V

A

P

E

V

H

P

S

L

Y

R

S

A

S

L

L

M

G

A

L

F

K

G

A

A

K

Y

M

M

D

R

A

D

G

A

W

V

T

G

G

L

L

R

Q

S

A

D

S

D

D

I

I

F

M

W

W

N

T

I

I

A

S

D

D

P

T

G

G

W
|
W

A

I

Y

L

G

N

L

I

Y

L

Y

C

A

S

V

L

T

M

G

E

P

P

L

W

L

A

L

L

G

G

V

A

P

C

T

T

I

F

L

V

N

H

E

L

-

L

G

P

G

K

F
|
F

T

D

A

P

E

L

N

V

T

I

Y

L

D

K

I

T

I

L

E

S

R

S

L

Y

G

P

V

I

T

K

S

S

L

M

A

M

G

G

S

A

P

P

T
x
I

A

V

F

Y

R

R

L

M

L

L

M

L

A

Q

A

Q

G

D

P

L

E

S

S

S

A

Y

A

K

R

F

V

-

K

-

G

P

R

H

L

L

R

Q

V

N

V

C

S

V

S

T

A
x
V

G
|
G

E
|
E

P
x
S

L

L

N

L

P

P

E

E

V

T

I

L

R

E

W

N

F

W

D

R

A

A

C

Q

L

T

G

G

A

L

P

D

I

I

H

R

D
x
E

H
x
S

Y
|
Y

G
|
G

Q
|
Q

T
|
T

E
|
E

L

T

G

G

M

L

V

T

V

C

N

M

N

V

H

S

H

K

G

T

L

M

E

K

H

-

P

-

V

I

R

K

Q

P

G

G

S

Y

A

M

G

G

Y

T

A

A

M

A

P

S

G

C

Y

Y

R

D

V

V

A

Q

V

I

L

I

D

D

E

D

A

K

G

G

K

N

E

V

V

L

G

P

P

P

N

G

E

T

P

E

G

G

V

D

L

I

A

G

I

I

D

R

I

V

D

K

N

P

-

I

S

R

P

P

L

I

L

G

W

I

F

F

T

S

G

G

Y

Y

Y

V

K

D

-

N

-

P

-

D

K

K

D

T

T

A

P

A

S

N

I

I

S

R

S

G

G

D

Y

F

Y

W

R

L

T

L

G

G

D
|
D

T

R

V

G

E

I

F

K

E

D

P

E

D

D

G

G

S

Y

I

F

S

Q

F
|
F

I

M

G

G

R
|
R

A

A

D

D

D

D

V

I

I

I

T
x
N

S

S

S
|
S

G
|
G

Y
|
Y

R
|
R

I

I

G

G

P

P

F

S

D

E

V

V

E

E

S

N

A

A

L

L

L

M

E

E

H

H

P

P

A

A

V

V

N

V

E

E

A

T

A

A

V

V

V

I

G

S

V

S

P

P

D

D

P

P

Q

V

R

R

T

G

E

E

I

V

V

V

K

K

A

A

F

F

V

V

I

V

L

L

A

A

P

S

G

Q

F

F

-

L

E

S

G

H

T

D

P

P

E

E

-

Q

L

L

A

T

E

K

E

E

L

L

A

Q

L

Q

H

H

V

V

K

K

K

S

Q

V

L

T

S

A

A
x
P

H
x
Y

A

K

Y
|
Y

P

P

R
|
R

Q

K

I

I

D

E

F

F

V

V

A

L

E

N

L

L

P

P

K

K

T

T

P

V

S

T

G

G

K
|
K

I

I

Q

Q

R

R

F

A

L

K

L

L

R

R

K

D

A

K

E

E

active site: T185 (= T205), T328 (= T349), E329 (= E350), N431 (≠ T450), R436 (= R455), K521 (= K538)
binding adenosine monophosphate: G302 (= G323), E303 (= E324), S304 (≠ P325), E323 (≠ D344), S324 (≠ H345), Y325 (= Y346), G326 (= G347), Q327 (= Q348), T328 (= T349), D410 (= D429), F422 (= F441), R425 (= R444), R436 (= R455)
binding Butyryl Coenzyme A: W229 (= W249), F255 (= F274), I277 (≠ T296), V301 (≠ A322), S433 (= S452), G434 (= G453), Y435 (= Y454), P501 (≠ A518), Y502 (≠ H519), Y504 (= Y521), R506 (= R523)

3b7wA Crystal structure of human acyl-coa synthetase medium-chain family member 2a, with l64p mutation (see paper)
35% identity, 87% coverage: 68:548/556 of query aligns to 50:535/537 of 3b7wA

query
sites
3b7wA

T

N

F

F

E

R

D

E

L

L

R

S

D

E

M

N

S

S

A

Q

R

Q

V

A

G

A

N

N

M

V

L

L

A

S

D

G

A

A

-

C

G

G

I

L

S

Q

A

R

G

G

D

D

V

R

V

V

A

A

G

V

L

V

L

L

P

P

R

R

T

V

P

P

E

E

L

W

V

W

A

L

T

V

I

I

L

L

G

G

A

C

W

I

R

R

I

A

G

G

A

L

I

I

Y

F

Q

M

P

P

L

G

F

T

T

I

A

Q

F

M

G

K

P

S

K

T

A

D

I

I

E

L

Q

Y

R

R

F

L

G

Q

T

M

S

S

G

K

A

A

K

K

L

A

V

I

V

V

T

-

N

-

L

-

A

A

N

G

R

D

S

E

K

V

L

I

A

Q

E

E

V

V

E

D

N

T

-

V

-

A

-

S

-

E

C

C

P

P

R

S

V

L

A

R

T

I

I

K

L

L

A

L

P

V

G

S

E

E

S

K

L

S

P

C

E

D

G

G

D

W

I

L

D

N

F

F

R

K

A

K

A

L

V

L

A

N

A

E

A

A

S

S

T

T

E

T

C

H

E

H

P

C

V

V

M

E

R

T

K

G

G

S

S

Q

D

E

L

A

F

S

M

A

M

I

M

Y

S

F

T
|
T

S

S

G

G

T

T

A

S

G

G

L

L

P

P

K

K

G

M

V

A

P

E

V

H

P

S

L

Y

R

S

A

S

L

L

M

G

A

L

F

K

G

A

A

K

Y

M

M

D

R

A

D

G

A

W

V

T

G

G

L

L

R

Q

S

A

D

S

D

D

I

I

F

M

W

W

N

T

I

I

A

S

D

D

P

T

G

G

W

W

A

I

Y

L

G

N

L

I

Y

L

Y

C

A

S

V

L

T

M

G

E

P

P

L

W

L

A

L

L

G

G

V

A

P

C

T

T

I

F

L

V

N

H

E

L

-

L

G

P

G

K

F

F

T

D

A

P

E

L

N

V

T

I

Y

L

D

K

I

T

I

L

E

S

R

S

L

Y

G

P

V

I

T

K

S

S

L

M

A

M

G

G

S

A

P

P

T

I

A

V

F

Y

R

R

L

M

L

L

M

L

A

Q

A

Q

G

D

P

L

E

S

S

S

A

Y

A

K

R

F

V

-

K

-

G

P

R

H

L

L

R

Q

V

N

V

C

S

V

S

T

A

V

G

G

E

E

P

S

L

L

N

L

P

P

E

E

V

T

I

L

R

E

W

N

F

W

D

R

A

A

C

Q

L

T

G

G

A

L

P

D

I

I

H

R

D

E

H

S

Y

Y

G

G

Q

Q

T
|
T

E
|
E

L

T

G

G

M

L

V

T

V

C

N

M

N

V

H

S

H

K

G

T

L

M

E

K

H

-

P

-

V

I

R

K

Q

P

G

G

S

Y

A

M

G

G

Y

T

A

A

M

A

P

S

G

C

Y

Y

R

D

V

V

A

Q

V

I

L

I

D

D

E

D

A

K

G

G

K

N

E

V

V

L

G

P

P

P

N

G

E

T

P

E

G

G

V

D

L

I

A

G

I

I

D

R

I

V

D

K

N

P

-

I

S

R

P

P

L

I

L

G

W

I

F

F

T

S

G

G

Y

Y

Y

V

K

D

-

N

-

P

-

D

K

K

D

T

T

A

P

A

S

N

I

I

S

R

S

G

G

D

Y

F

Y

W

R

L

T

L

G

G

D

D

T

R

V

G

E

I

F

K

E

D

P

E

D

D

G

G

S

Y

I

F

S

Q

F

F

I

M

G

G

R

R

A

A

D

D

D

D

V

I

I

I

T
x
N

S

S

S

S

G

G

Y

Y

R
|
R

I

I

G

G

P

P

F

S

D

E

V

V

E

E

S

N

A

A

L

L

L
x
M

E

E

H
|
H

P

P

A

A

V
|
V

N

V

E

E

A

T

A

A

V

V

V

I

G

S

V

S

P

P

D

D

P

P

Q

V

R

R

T

G

E

E

I

V

V

V

K

K

A

A

F

F

V

V

I

V

L

L

A

A

P

S

G

Q

F

F

-

L

E

S

G

H

T

D

P

P

E

E

-

Q

L

L

A

T

E

K

E

E

L

L

A

Q

L

Q

H

H

V

V

K

K

K

S

Q

V

L

T

S

A

A

P

H

Y

A

K

Y

Y

P

P

R

R

Q

K

I

I

D

E

F

F

V

V

A

L

E

N

L

L

P

P

K

K

T

T

P

V

S

T

G

G

K
|
K

I

I

Q

Q

R

R

F

A

L

K

L

L

R

R

K

D

A

K

E

E

active site: T189 (= T205), T332 (= T349), E333 (= E350), N435 (≠ T450), R440 (= R455), K525 (= K538)
binding magnesium ion: M451 (≠ L466), H453 (= H468), V456 (= V471)

2wd9A Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in complex with ibuprofen (see paper)
35% identity, 87% coverage: 68:548/556 of query aligns to 46:531/533 of 2wd9A

query
sites
2wd9A

T

N

F

F

E

R

D

E

L

L

R

S

D

E

M

N

S

S

A

Q

R

Q

V

A

G

A

N

N

M

V

L

L

A

S

D

G

A

A

-

C

G

G

I

L

S

Q

A

R

G

G

D

D

V

R

V

V

A

A

G

V

L

V

L

L

P

P

R

R

T

V

P

P

E

E

L

W

V

W

A

L

T

V

I

I

L

L

G

G

A

C

W

I

R

R

I

A

G

G

A

L

I

I

Y

F

Q

M

P

P

L

G

F

T

T

I

A

Q

F

M

G

K

P

S

K

T

A

D

I

I

E

L

Q

Y

R

R

F

L

G

Q

T

M

S

S

G

K

A

A

K

K

L

A

V

I

V

V

T

-

N

-

L

-

A

A

N

G

R

D

S

E

K

V

L

I

A

Q

E

E

V

V

E

D

N

T

-

V

-

A

-

S

-

E

C

C

P

P

R

S

V

L

A

R

T

I

I

K

L

L

A

L

P

V

G

S

E

E

S

K

L

S

P

C

E

D

G

G

D

W

I

L

D

N

F

F

R

K

A

K

A

L

V

L

A

N

A

E

A

A

S

S

T

T

E

T

C

H

E

H

P

C

V

V

M

E

R

T

K

G

G

S

S

Q

D

E

L

A

F

S

M

A

M

I

M

Y

S

F

T
|
T

S

S

G

G

T

T

A

S

G

G

L

L

P

P

K

K

G

M

V

A

P

E

V

H

P

S

L

Y

R

S

A

S

L

L

M

G

A

L

F

K

G

A

A

K

Y

M

M

D

R

A

D

G

A

W

V

T

G

G

L

L

R

Q

S

A

D

S

D

D

I

I

F

M

W

W

N

T

I

I

A

S

D

D

P

T

G

G

W

W

A
x
I

Y
x
L

G

N

L

I

Y

L

Y

C

A

S

V

L

T

M

G

E

P

P

L

W

L

A

L

L

G

G

V

A

P

C

T

T

I

F

L

V

N

H

E

L

-

L

G

P

G

K

F

F

T

D

A

P

E

L

N

V

T

I

Y

L

D

K

I

T

I

L

E

S

R

S

L

Y

G

P

V

I

T

K

S

S

L

M

A

M

G

G

S

A

P

P

T

I

A

V

F

Y

R

R

L

M

L

L

M

L

A

Q

A

Q

G

D

P

L

E

S

S

S

A

Y

A

K

R

F

V

-

K

-

G

P

R

H

L

L

R

Q

V

N

V

C

S

V

S

T

A

V

G

G

E

E

P

S

L

L

N

L

P

P

E

E

V

T

I

L

R

E

W

N

F

W

D

R

A

A

C

Q

L

T

G

G

A

L

P

D

I

I

H

R

D

E

H

S

Y

Y

G
|
G

Q
|
Q

T
|
T

E
|
E

L

T

G

G

M

L

V

T

V

C

N

M

N

V

H

S

H

K

G

T

L

M

E

K

H

-

P

-

V

I

R

K

Q

P

G

G

S

Y

A

M

G

G

Y

T

A

A

M

A

P

S

G

C

Y

Y

R

D

V

V

A

Q

V

I

L

I

D

D

E

D

A

K

G

G

K

N

E

V

V

L

G

P

P

P

N

G

E

T

P

E

G

G

V

D

L

I

A

G

I

I

D

R

I

V

D

K

N

P

-

I

S

R

P

P

L

I

L

G

W

I

F

F

T

S

G

G

Y

Y

Y

V

K

D

-

N

-

P

-

D

K

K

D

T

T

A

P

A

S

N

I

I

S

R

S

G

G

D

Y

F

Y

W

R

L

T

L

G

G

D

D

T

R

V

G

E

I

F

K

E

D

P

E

D

D

G

G

S

Y

I

F

S

Q

F

F

I

M

G

G

R

R

A

A

D

D

D

D

V

I

I

I

T
x
N

S

S

S

S

G

G

Y

Y

R
|
R

I

I

G

G

P

P

F

S

D

E

V

V

E

E

S

N

A

A

L

L

L

M

E

E

H

H

P

P

A

A

V

V

N

V

E

E

A

T

A

A

V

V

V

I

G

S

V

S

P

P

D

D

P

P

Q

V

R

R

T

G

E

E

I

V

V

V

K

K

A

A

F

F

V

V

I

V

L

L

A

A

P

S

G

Q

F

F

-

L

E

S

G

H

T

D

P

P

E

E

-

Q

L

L

A

T

E

K

E

E

L

L

A

Q

L

Q

H

H

V

V

K

K

K

S

Q

V

L

T

S

A

A

P

H

Y

A

K

Y

Y

P

P

R

R

Q

K

I

I

D

E

F

F

V

V

A

L

E

N

L

L

P

P

K

K

T

T

P

V

S

T

G

G

K
|
K

I

I

Q

Q

R

R

F

A

L

K

L

L

R

R

K

D

A

K

E

E

active site: T185 (= T205), T328 (= T349), E329 (= E350), N431 (≠ T450), R436 (= R455), K521 (= K538)
binding ibuprofen: I230 (≠ A250), L231 (≠ Y251), G326 (= G347), Q327 (= Q348), T328 (= T349), R436 (= R455)

2vzeA Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in complex with amp (see paper)
35% identity, 87% coverage: 68:548/556 of query aligns to 46:531/533 of 2vzeA

query
sites
2vzeA

T

N

F

F

E

R

D

E

L

L

R

S

D

E

M

N

S

S

A

Q

R

Q

V

A

G

A

N

N

M

V

L

L

A

S

D

G

A

A

-

C

G

G

I

L

S

Q

A

R

G

G

D

D

V

R

V

V

A

A

G

V

L

V

L

L

P

P

R

R

T

V

P

P

E

E

L

W

V

W

A

L

T

V

I

I

L

L

G

G

A

C

W

I

R

R

I

A

G

G

A

L

I

I

Y

F

Q

M

P

P

L

G

F

T

T

I

A

Q

F

M

G

K

P

S

K

T

A

D

I

I

E

L

Q

Y

R

R

F

L

G

Q

T

M

S

S

G

K

A

A

K

K

L

A

V

I

V

V

T

-

N

-

L

-

A

A

N

G

R

D

S

E

K

V

L

I

A

Q

E

E

V

V

E

D

N

T

-

V

-

A

-

S

-

E

C

C

P

P

R

S

V

L

A

R

T

I

I

K

L

L

A

L

P

V

G

S

E

E

S

K

L

S

P

C

E

D

G

G

D

W

I

L

D

N

F

F

R

K

A

K

A

L

V

L

A

N

A

E

A

A

S

S

T

T

E

T

C

H

E

H

P

C

V

V

M

E

R

T

K

G

G

S

S

Q

D

E

L

A

F

S

M

A

M

I

M

Y

S

F

T
|
T

S

S

G

G

T

T

A

S

G

G

L

L

P

P

K

K

G

M

V

A

P

E

V

H

P

S

L

Y

R

S

A

S

L

L

M

G

A

L

F

K

G

A

A

K

Y

M

M

D

R

A

D

G

A

W

V

T

G

G

L

L

R

Q

S

A

D

S

D

D

I

I

F

M

W

W

N

T

I

I

A

S

D

D

P

T

G

G

W
|
W

A

I

Y

L

G

N

L

I

Y

L

Y

C

A

S

V

L

T

M

G

E

P

P

L

W

L

A

L

L

G

G

V

A

P

C

T

T

I

F

L

V

N

H

E

L

-

L

G

P

G

K

F

F

T

D

A

P

E

L

N

V

T

I

Y

L

D

K

I

T

I

L

E

S

R

S

L

Y

G

P

V

I

T

K

S

S

L

M

A

M

G

G

S

A

P

P

T

I

A

V

F

Y

R

R

L

M

L

L

M

L

A

Q

A

Q

G

D

P

L

E

S

S

S

A

Y

A

K

R

F

V

-

K

-

G

P

R

H

L

L

R

Q

V

N

V

C

S

V

S

T

A

V

G
|
G

E
|
E

P
x
S

L

L

N

L

P

P

E

E

V

T

I

L

R

E

W

N

F

W

D

R

A

A

C

Q

L

T

G

G

A

L

P

D

I

I

H

R

D
x
E

H

S

Y
|
Y

G
|
G

Q
|
Q

T
|
T

E
|
E

L

T

G

G

M

L

V

T

V

C

N

M

N

V

H

S

H

K

G

T

L

M

E

K

H

-

P

-

V

I

R

K

Q

P

G

G

S

Y

A

M

G

G

Y

T

A

A

M

A

P

S

G

C

Y

Y

R

D

V

V

A

Q

V

I

L

I

D

D

E

D

A

K

G

G

K

N

E

V

V

L

G

P

P

P

N

G

E

T

P

E

G

G

V

D

L

I

A

G

I

I

D

R

I

V

D

K

N

P

-

I

S

R

P

P

L

I

L

G

W

I

F

F

T

S

G

G

Y

Y

Y

V

K

D

-

N

-

P

-

D

K

K

D

T

T

A

P

A

S

N

I

I

S

R

S

G

G

D

Y

F

Y

W

R

L

T

L

G

G

D
|
D

T

R

V

G

E

I

F

K

E

D

P

E

D

D

G

G

S

Y

I

F

S

Q

F
|
F

I

M

G

G

R
|
R

A

A

D

D

D

D

V

I

I

I

T
x
N

S

S

S

S

G

G

Y

Y

R
|
R

I

I

G

G

P

P

F

S

D

E

V

V

E

E

S

N

A

A

L

L

L

M

E

E

H

H

P

P

A

A

V

V

N

V

E

E

A

T

A

A

V

V

V

I

G

S

V

S

P

P

D

D

P

P

Q

V

R

R

T

G

E

E

I

V

V

V

K

K

A

A

F

F

V

V

I

V

L

L

A

A

P

S

G

Q

F

F

-

L

E

S

G

H

T

D

P

P

E

E

-

Q

L

L

A

T

E

K

E

E

L

L

A

Q

L

Q

H

H

V

V

K

K

K

S

Q

V

L

T

S

A

A

P

H

Y

A

K

Y

Y

P

P

R

R

Q

K

I

I

D

E

F

F

V

V

A

L

E

N

L

L

P

P

K

K

T

T

P

V

S

T

G

G

K
|
K

I

I

Q

Q

R

R

F

A

L

K

L

L

R

R

K

D

A

K

E

E

active site: T185 (= T205), T328 (= T349), E329 (= E350), N431 (≠ T450), R436 (= R455), K521 (= K538)
binding adenosine monophosphate: W229 (= W249), G302 (= G323), E303 (= E324), S304 (≠ P325), E323 (≠ D344), Y325 (= Y346), G326 (= G347), Q327 (= Q348), T328 (= T349), D410 (= D429), F422 (= F441), R425 (= R444), R436 (= R455)

3c5eA Crystal structure of human acyl-coa synthetase medium-chain family member 2a (l64p mutation) in complex with atp (see paper)
35% identity, 87% coverage: 68:548/556 of query aligns to 49:534/536 of 3c5eA

query
sites
3c5eA

T

N

F

F

E

R

D

E

L

L

R

S

D

E

M

N

S

S

A

Q

R

Q

V

A

G

A

N

N

M

V

L

L

A

S

D

G

A

A

-

C

G

G

I

L

S

Q

A

R

G

G

D

D

V

R

V

V

A

A

G

V

L

V

L

L

P

P

R

R

T

V

P

P

E

E

L

W

V

W

A

L

T

V

I

I

L

L

G

G

A

C

W

I

R

R

I

A

G

G

A

L

I

I

Y

F

Q

M

P

P

L

G

F

T

T

I

A

Q

F

M

G

K

P

S

K

T

A

D

I

I

E

L

Q

Y

R

R

F

L

G

Q

T

M

S

S

G

K

A

A

K

K

L

A

V

I

V

V

T

-

N

-

L

-

A

A

N

G

R

D

S

E

K

V

L

I

A

Q

E

E

V

V

E

D

N

T

-

V

-

A

-

S

-

E

C

C

P

P

R

S

V

L

A

R

T

I

I

K

L

L

A

L

P

V

G

S

E

E

S

K

L

S

P

C

E

D

G

G

D

W

I

L

D

N

F

F

R

K

A

K

A

L

V

L

A

N

A

E

A

A

S

S

T

T

E

T

C

H

E

H

P

C

V

V

M

E

R

T

K

G

G

S

S

Q

D

E

L

A

F

S

M

A

M

I

M

Y

S

F

T
|
T

S
|
S

G
|
G

T
|
T

A
x
S

G

G

L

L

P

P

K

K

G

M

V

A

P

E

V

H

P

S

L

Y

R

S

A

S

L

L

M

G

A

L

F

K

G

A

A

K

Y

M

M

D

R

A

D

G

A

W

V

T

G

G

L

L

R

Q

S

A

D

S

D

D

I

I

F

M

W

W

N

T

I

I

A

S

D

D

P

T

G

G

W

W

A

I

Y

L

G

N

L

I

Y

L

Y

C

A

S

V

L

T

M

G

E

P

P

L

W

L

A

L

L

G

G

V

A

P

C

T

T

I

F

L

V

N

H

E

L

-

L

G

P

G

K

F

F

T

D

A

P

E

L

N

V

T

I

Y

L

D

K

I

T

I

L

E

S

R

S

L

Y

G

P

V

I

T

K

S

S

L

M

A

M

G

G

S

A

P

P

T

I

A

V

F

Y

R

R

L

M

L

L

M

L

A

Q

A

Q

G

D

P

L

E

S

S

S

A

Y

A

K

R

F

V

-

K

-

G

P

R

H

L

L

R

Q

V

N

V

C

S

V

S

T

A

V

G
|
G

E
|
E

P
x
S

L

L

N

L

P

P

E

E

V

T

I

L

R

E

W

N

F

W

D

R

A

A

C

Q

L

T

G

G

A

L

P

D

I

I

H

R

D

E

H

S

Y

Y

G
|
G

Q
|
Q

T
|
T

E
|
E

L

T

G

G

M

L

V

T

V

C

N

M

N

V

H

S

H

K

G

T

L

M

E

K

H

-

P

-

V

I

R

K

Q

P

G

G

S

Y

A

M

G

G

Y

T

A

A

M

A

P

S

G

C

Y

Y

R

D

V

V

A

Q

V

I

L

I

D

D

E

D

A

K

G

G

K

N

E

V

V

L

G

P

P

P

N

G

E

T

P

E

G

G

V

D

L

I

A

G

I

I

D

R

I

V

D

K

N

P

-

I

S

R

P

P

L

I

L

G

W

I

F

F

T

S

G

G

Y

Y

Y

V

K

D

-

N

-

P

-

D

K

K

D

T

T

A

P

A

S

N

I

I

S

R

S

G

G

D

Y

F

Y

W

R

L

T

L

G

G

D
|
D

T

R

V

G

E

I

F

K

E

D

P

E

D

D

G

G

S

Y

I

F

S

Q

F
|
F

I

M

G

G

R
|
R

A

A

D

D

D

D

V

I

I

I

T
x
N

S

S

S

S

G

G

Y

Y

R
|
R

I

I

G

G

P

P

F

S

D

E

V

V

E

E

S

N

A

A

L

L

L
x
M

E

E

H
|
H

P

P

A

A

V
|
V

N

V

E

E

A

T

A

A

V

V

V

I

G

S

V

S

P

P

D

D

P

P

Q

V

R

R

T

G

E

E

I

V

V

V

K

K

A

A

F

F

V

V

I

V

L

L

A

A

P

S

G

Q

F

F

-

L

E

S

G

H

T

D

P

P

E

E

-

Q

L

L

A

T

E

K

E

E

L

L

A

Q

L

Q

H

H

V

V

K

K

K

S

Q

V

L

T

S

A

A

P

H

Y

A

K

Y

Y

P

P

R

R

Q

K

I

I

D

E

F

F

V

V

A

L

E

N

L

L

P

P

K

K

T

T

P

V

S

T

G

G

K
|
K

I

I

Q

Q

R

R

F

A

L

K

L

L

R

R

K

D

A

K

E

E

active site: T188 (= T205), T331 (= T349), E332 (= E350), N434 (≠ T450), R439 (= R455), K524 (= K538)
binding adenosine-5'-triphosphate: T188 (= T205), S189 (= S206), G190 (= G207), T191 (= T208), S192 (≠ A209), G305 (= G323), E306 (= E324), S307 (≠ P325), G329 (= G347), Q330 (= Q348), T331 (= T349), D413 (= D429), F425 (= F441), R428 (= R444), K524 (= K538)
binding magnesium ion: M450 (≠ L466), H452 (= H468), V455 (= V471)

Q08AH3 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; Acyl-CoA synthetase medium-chain family member 2A; Benzoate--CoA ligase; Butyrate--CoA ligase 2A; Butyryl-coenzyme A synthetase 2A; Middle-chain acyl-CoA synthetase 2A; EC 6.2.1.2; EC 6.2.1.25 from Homo sapiens (Human) (see 4 papers)
35% identity, 87% coverage: 68:548/556 of query aligns to 82:567/577 of Q08AH3

query
sites
Q08AH3

T

N

F

F

E

R

D

E

L

L

R

S

D

E

M

N

S

S

A

Q

R

Q

V

A

G

A

N

N

M

V

L

L

A

S

D

G

A

A

-

C

G

G

I

L

S

Q

A

R

G

G

D

D

V

R