SitesBLAST
Comparing WP_015888055.1 NCBI__GCF_000018545.1:WP_015888055.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
5itvA Crystal structure of bacillus subtilis bacc dihydroanticapsin 7- dehydrogenase in complex with nadh (see paper)
38% identity, 99% coverage: 1:248/251 of query aligns to 1:251/255 of 5itvA
- active site: G18 (≠ N18), S141 (= S140), Y154 (= Y153), K158 (= K157)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G14 (= G14), S17 (≠ A17), G18 (≠ N18), I19 (= I19), D38 (= D38), I39 (= I39), T61 (≠ A60), I63 (= I62), N89 (= N88), G91 (= G90), T139 (≠ M138), S141 (= S140), Y154 (= Y153), K158 (= K157), P184 (= P183), G185 (= G184), I186 (≠ W185), I187 (= I186)
5itvD Crystal structure of bacillus subtilis bacc dihydroanticapsin 7- dehydrogenase in complex with nadh (see paper)
37% identity, 99% coverage: 1:248/251 of query aligns to 1:223/227 of 5itvD
- active site: G18 (≠ N18), S141 (= S140), Y154 (= Y153), K158 (= K157)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G14 (= G14), S17 (≠ A17), G18 (≠ N18), I19 (= I19), D38 (= D38), I39 (= I39), T61 (≠ A60), D62 (= D61), I63 (= I62), N89 (= N88), T139 (≠ M138), S141 (= S140), Y154 (= Y153), K158 (= K157), P184 (= P183), G185 (= G184), I187 (= I186)
1nfqA Rv2002 gene product from mycobacterium tuberculosis (see paper)
39% identity, 98% coverage: 2:248/251 of query aligns to 1:236/244 of 1nfqA
- active site: G17 (≠ N18), S139 (= S140), Y152 (= Y153), K156 (= K157)
- binding Androsterone: L91 (≠ Q92), E141 (≠ A142), C149 (≠ L150), Y152 (= Y153), V193 (≠ L198), I197 (≠ L207), F198 (≠ V208)
- binding 1,4-dihydronicotinamide adenine dinucleotide: R16 (≠ A17), G17 (≠ N18), M18 (≠ I19), D37 (= D38), L39 (≠ D40), L59 (≠ A60), D60 (= D61), V61 (≠ I62), N87 (= N88), A88 (= A89), I137 (≠ M138), S139 (= S140), Y152 (= Y153), K156 (= K157), P182 (= P183), V185 (≠ I186), T187 (= T188), P188 (= P189), M189 (≠ F190), T190 (≠ N191)
1nffA Crystal structure of rv2002 gene product from mycobacterium tuberculosis (see paper)
39% identity, 98% coverage: 2:248/251 of query aligns to 1:236/244 of 1nffA
- active site: G17 (≠ N18), S139 (= S140), Y152 (= Y153), K156 (= K157)
- binding nicotinamide-adenine-dinucleotide: G13 (= G14), R16 (≠ A17), G17 (≠ N18), M18 (≠ I19), D37 (= D38), I38 (= I39), L39 (≠ D40), L59 (≠ A60), D60 (= D61), V61 (≠ I62), N87 (= N88), A88 (= A89), G89 (= G90), I90 (= I91), I137 (≠ M138), S139 (= S140), Y152 (= Y153), K156 (= K157), P182 (= P183), V185 (≠ I186), T187 (= T188), P188 (= P189), M189 (≠ F190), T190 (≠ N191)
P9WGT1 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase; NADH-dependent 3alpha, 20beta-hydroxysteroid dehydrogenase; EC 1.1.1.53 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
40% identity, 99% coverage: 1:248/251 of query aligns to 1:237/260 of P9WGT1
- I6 (≠ S6) mutation to T: Maximal improvement in solubility; when associated with M-47 and K-69.
- R17 (≠ A17) binding NAD(+)
- M19 (≠ I19) binding NAD(+)
- D38 (= D38) binding NAD(+)
- V47 (= V47) mutation to M: Maximal improvement in solubility; when associated with T-6 and K-69.
- D61 (= D61) binding NAD(+)
- V62 (≠ I62) binding NAD(+)
- T69 (≠ K69) mutation to K: Maximal improvement in solubility; when associated with T-6 and M-47.
- N88 (= N88) binding NAD(+)
- S140 (= S140) mutation to A: Complete loss of both oxidation of androsterone and reduction of progesterone; when associated with T-6; M-47 and K-69.
- Y153 (= Y153) binding NAD(+); mutation to F: Complete loss of both oxidation of androsterone and reduction of progesterone; when associated with T-6; M-47 and K-69.
- K157 (= K157) binding NAD(+)
- V186 (≠ I186) binding NAD(+)
- T188 (= T188) binding NAD(+)
- T191 (≠ N191) binding NAD(+)
3ak4A Crystal structure of nadh-dependent quinuclidinone reductase from agrobacterium tumefaciens
35% identity, 98% coverage: 5:249/251 of query aligns to 5:255/258 of 3ak4A
- active site: G18 (≠ N18), S141 (= S140), L151 (= L150), Y154 (= Y153), K158 (= K157), E199 (≠ R201)
- binding nicotinamide-adenine-dinucleotide: K17 (≠ A17), G18 (≠ N18), I19 (= I19), D38 (= D38), L39 (≠ I39), V60 (≠ A60), D61 (= D61), V62 (≠ I62), N88 (= N88), A89 (= A89), G90 (= G90), T139 (≠ M138), S141 (= S140), Y154 (= Y153), K158 (= K157), G185 (= G184), V187 (≠ I186), T189 (= T188), M191 (≠ F190)
8zaxA Crystal structure of a short-chain dehydrogenase from lactobacillus fermentum with NADPH
38% identity, 98% coverage: 3:248/251 of query aligns to 1:242/246 of 8zaxA
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G12 (= G14), T14 (≠ V16), K15 (≠ A17), G16 (≠ N18), I17 (= I19), G37 (≠ D38), R38 (≠ I39), H39 (≠ D40), Q59 (≠ A60), D60 (= D61), V61 (≠ I62), N87 (= N88), A88 (= A89), I110 (= I111), S138 (= S140), Y151 (= Y153), K155 (= K157), P183 (= P183), I186 (= I186)
4wecA Crystal structure of a short chain dehydrogenase from mycobacterium smegmatis
35% identity, 99% coverage: 1:249/251 of query aligns to 4:250/258 of 4wecA
- active site: G21 (≠ N18), S143 (= S140), Q154 (≠ L150), Y157 (= Y153), K161 (= K157)
- binding nicotinamide-adenine-dinucleotide: G17 (= G14), A19 (≠ V16), S20 (≠ A17), G21 (≠ N18), I22 (= I19), D41 (= D38), I42 (= I39), V61 (≠ A60), D62 (= D61), V63 (≠ I62), N89 (= N88), T141 (≠ M138), Y157 (= Y153), K161 (= K157), P187 (= P183), P189 (= P189), V190 (≠ F190)
7krmC Putative fabg bound to nadh from acinetobacter baumannii
35% identity, 98% coverage: 5:249/251 of query aligns to 3:241/244 of 7krmC
- active site: G18 (vs. gap), S140 (= S140), Y155 (= Y153)
- binding nicotinamide-adenine-dinucleotide: G12 (= G14), S15 (≠ A17), G18 (vs. gap), I19 (= I19), D38 (= D38), L39 (≠ I39), A60 (= A60), N61 (≠ D61), V62 (≠ I62), N88 (= N88), V111 (≠ I111), S140 (= S140), Y155 (= Y153), K159 (= K157), I188 (= I186), T190 (= T188)
6pejA Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol
34% identity, 98% coverage: 4:248/251 of query aligns to 3:253/257 of 6pejA
1zk1A Structure of r-specific alcohol dehydrogenase (mutant g37d) from lactobacillus brevis in complex with phenylethanol and NAD (see paper)
37% identity, 98% coverage: 2:248/251 of query aligns to 1:247/251 of 1zk1A
- active site: G17 (≠ N18), S142 (= S140), Y155 (= Y153), K159 (= K157)
- binding 1-phenylethanone: A93 (≠ Q92), N95 (≠ S94), Y155 (= Y153), Y189 (≠ W185)
- binding nicotinamide-adenine-dinucleotide: G13 (= G14), L16 (≠ A17), I18 (= I19), D37 (= D38), H61 (≠ A60), D62 (= D61), S63 (≠ I62), N89 (= N88), A90 (= A89), I92 (= I91), M140 (= M138), Y155 (= Y153), G188 (= G184), I190 (= I186), L194 (≠ F190)
1zjzA Structure of r-specific alcohol dehydrogenase (mutant g37d) from lactobacillus brevis in complex with phenylethanol and NAD (see paper)
37% identity, 98% coverage: 2:248/251 of query aligns to 1:247/251 of 1zjzA
- active site: G17 (≠ N18), S142 (= S140), Y155 (= Y153), K159 (= K157)
- binding nicotinamide-adenine-dinucleotide: G13 (= G14), L16 (≠ A17), I18 (= I19), D37 (= D38), D62 (= D61), N89 (= N88), A90 (= A89), G91 (= G90), I92 (= I91), Y155 (= Y153), G188 (= G184), I190 (= I186), L194 (≠ F190)
- binding (1r)-1-phenylethanol: A93 (≠ Q92), N95 (≠ S94), L152 (= L150), Y155 (= Y153)
1zjyA Structure of r-specific alcohol dehydrogenase (mutant g37d) from lactobacillus brevis in complex with phenylethanol and nadh (see paper)
37% identity, 98% coverage: 2:248/251 of query aligns to 1:247/251 of 1zjyA
- active site: G17 (≠ N18), S142 (= S140), Y155 (= Y153), K159 (= K157)
- binding 1,4-dihydronicotinamide adenine dinucleotide: G13 (= G14), L16 (≠ A17), G17 (≠ N18), I18 (= I19), D37 (= D38), D62 (= D61), N89 (= N88), A90 (= A89), G91 (= G90), I92 (= I91), Y155 (= Y153), G188 (= G184), I190 (= I186), L194 (≠ F190)
- binding (1r)-1-phenylethanol: A93 (≠ Q92), N95 (≠ S94), L152 (= L150), Y155 (= Y153), Y189 (≠ W185)
Q8JZV9 Dehydrogenase/reductase SDR family member 6; (R)-beta-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase type 2; 4-oxo-L-proline reductase; Oxidoreductase UCPA; Short chain dehydrogenase/reductase family 15C member 1; EC 1.1.1.-; EC 1.1.1.30; EC 1.1.1.104 from Mus musculus (Mouse) (see paper)
37% identity, 98% coverage: 3:248/251 of query aligns to 2:242/245 of Q8JZV9
- Y147 (= Y153) active site, Proton acceptor; mutation to F: Loss of function.
3ijrF 2.05 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'Ames ancestor' in complex with NAD+
33% identity, 99% coverage: 2:249/251 of query aligns to 41:286/290 of 3ijrF
- active site: G57 (≠ N18), S182 (= S140), L192 (= L150), Y195 (= Y153), K199 (= K157), K240 (= K203)
- binding magnesium ion: D55 (≠ V16), S56 (≠ A17), E80 (≠ A41)
- binding nicotinamide-adenine-dinucleotide: D55 (≠ V16), S56 (≠ A17), G57 (≠ N18), I58 (= I19), Y77 (≠ D38), L78 (≠ I39), E80 (≠ A41), G103 (≠ A60), D104 (= D61), L105 (≠ I62), N131 (= N88), V132 (≠ A89), A133 (≠ G90), Q134 (≠ I91), I155 (= I111), T180 (≠ M138), S182 (= S140), Y195 (= Y153), K199 (= K157), P225 (= P183), G226 (= G184), P227 (≠ W185), I228 (= I186), T230 (= T188), L232 (≠ F190)
Sites not aligning to the query:
3i3oA 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'Ames ancestor' in complex with NAD-acetone
33% identity, 99% coverage: 2:249/251 of query aligns to 33:278/282 of 3i3oA
- active site: G49 (≠ N18), S174 (= S140), L184 (= L150), Y187 (= Y153), K191 (= K157), K232 (= K203)
- binding magnesium ion: D47 (≠ V16), S48 (≠ A17), E72 (≠ A41)
- binding nicotinamide adenine dinucleotide acetone adduct: G45 (= G14), D47 (≠ V16), S48 (≠ A17), G49 (≠ N18), I50 (= I19), Y69 (≠ D38), L70 (≠ I39), E72 (≠ A41), G95 (≠ A60), D96 (= D61), L97 (≠ I62), N123 (= N88), V124 (≠ A89), A125 (≠ G90), Q126 (≠ I91), Q127 (= Q92), I147 (= I111), T172 (≠ M138), S174 (= S140), Y187 (= Y153), K191 (= K157), P217 (= P183), G218 (= G184), I220 (= I186), T222 (= T188), L224 (≠ F190)
6ixmC Crystal structure of the ketone reductase chkred20 from the genome of chryseobacterium sp. Ca49 complexed with NAD (see paper)
35% identity, 98% coverage: 3:248/251 of query aligns to 1:244/248 of 6ixmC
- active site: G16 (≠ N18), S142 (= S140), Y155 (= Y153), K159 (= K157)
- binding nicotinamide-adenine-dinucleotide: G12 (= G14), S15 (≠ A17), G16 (≠ N18), I17 (= I19), D36 (= D38), I37 (= I39), A61 (= A60), D62 (= D61), T63 (≠ I62), N89 (= N88), A90 (= A89), M140 (= M138), S142 (= S140), Y155 (= Y153), K159 (= K157), P185 (= P183), A186 (≠ G184), Y187 (≠ W185), I188 (= I186), L192 (≠ F190)
1zk4A Structure of r-specific alcohol dehydrogenase (wildtype) from lactobacillus brevis in complex with acetophenone and NADP (see paper)
37% identity, 98% coverage: 2:248/251 of query aligns to 1:247/251 of 1zk4A
- active site: G17 (≠ N18), S142 (= S140), Y155 (= Y153), K159 (= K157)
- binding 1-phenylethanone: A93 (≠ Q92), Y155 (= Y153), Y189 (≠ W185)
- binding nadp nicotinamide-adenine-dinucleotide phosphate: G13 (= G14), T15 (≠ V16), L16 (≠ A17), I18 (= I19), T36 (≠ V37), G37 (≠ D38), R38 (≠ I39), H61 (≠ A60), D62 (= D61), N89 (= N88), A90 (= A89), G91 (= G90), I92 (= I91), Y155 (= Y153), G188 (= G184), I190 (= I186), T192 (= T188), L194 (≠ F190)
D4A1J4 Dehydrogenase/reductase SDR family member 6; (R)-beta-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase type 2; 4-oxo-L-proline reductase; Oxidoreductase UCPA; Short chain dehydrogenase/reductase family 15C member 1; EC 1.1.1.-; EC 1.1.1.30; EC 1.1.1.104 from Rattus norvegicus (Rat) (see paper)
36% identity, 98% coverage: 3:248/251 of query aligns to 2:242/245 of D4A1J4
- Y147 (= Y153) mutation to F: Loss of function.
Q6WVP7 NADP-dependent (R)-specific alcohol dehydrogenase; (R)-specific ADH; Ketoreductase; KRED; EC 1.1.1.- from Lentilactobacillus kefiri (Lactobacillus kefiri) (see paper)
37% identity, 99% coverage: 1:248/251 of query aligns to 1:248/252 of Q6WVP7
Sites not aligning to the query:
Query Sequence
>WP_015888055.1 NCBI__GCF_000018545.1:WP_015888055.1
MSGRLSGKRVLLTGGVANIGLAIVEAFVAEGAIVSVVDIDAAKGSDVEKRFGERVRFFKA
DISQEDEIKNAIAQSVAWMKGLDTLCLNAGIQLSGKMEDFSTSNWDKVFTINVRANFIFA
RESVKHLRDAGKASIVMMSSLAGKRGAPGLLAYSASKAAVIGLTTTLALELARDGIRVNA
VCPGWIDTPFNQPAIDYLGGRDKQESLVPTVIPLGRQATPQEVAPLFVYLASDEASYVTA
QSINVDGGIYN
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory