Comparing WP_015927086.1 NCBI__GCF_000022085.1:WP_015927086.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4rv5A The crystal structure of a solute-binding protein from anabaena variabilis atcc 29413 in complex with pyruvic acid
36% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4rv5A
Sites not aligning to the query:
4obbA The crystal structure of a solute-binding protein from anabaena variabilis atcc 29413 in complex with (3s)-3-methyl-2-oxopentanoic acid.
36% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4obbA
Sites not aligning to the query:
4rdcA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with proline
35% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4rdcA
Sites not aligning to the query:
4qymA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with methionine
35% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4qymA
Sites not aligning to the query:
4otzA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with cystein
35% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4otzA
Sites not aligning to the query:
4og2A The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with leucine
35% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4og2A
Sites not aligning to the query:
4oatA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with isoleucine.
35% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4oatA
Sites not aligning to the query:
4nv3A The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with valine.
35% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4nv3A
Sites not aligning to the query:
4nqrA The crystal structure of a solute-binding protein (n280d mutant) from anabaena variabilis atcc 29413 in complex with alanine
35% identity, 80% coverage: 51:352/377 of query aligns to 25:334/364 of 4nqrA
Sites not aligning to the query:
4gnrA 1.0 angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein livj from streptococcus pneumoniae str. Canada mdr_19a in complex with isoleucine
32% identity, 93% coverage: 29:377/377 of query aligns to 3:344/348 of 4gnrA
3td9A Crystal structure of a leucine binding protein livk (tm1135) from thermotoga maritima msb8 at 1.90 a resolution
30% identity, 91% coverage: 29:371/377 of query aligns to 2:337/350 of 3td9A
4zpjA Abc transporter substrate-binding protein from sphaerobacter thermophilus
29% identity, 88% coverage: 28:360/377 of query aligns to 2:341/371 of 4zpjA
4n0qB Crystal structure of an abc transporter, substrate-binding protein from brucella melitensis 16m in complex with l-leucine using a crystal grown in a crystal former (microlytic)
27% identity, 87% coverage: 29:356/377 of query aligns to 3:326/345 of 4n0qB
4jb0A Rhodopseudomonas palustris (strain cga009) rp1789 transport protein (see paper)
27% identity, 90% coverage: 40:377/377 of query aligns to 15:358/367 of 4jb0A
4eyqA Crystal structure of solute binding protein of abc transporter from rhodopseudomonas palustris haa2 in complex with caffeic acid/3-(4- hydroxy-phenyl)pyruvic acid (see paper)
25% identity, 90% coverage: 40:377/377 of query aligns to 18:361/361 of 4eyqA
3ipcA Structure of atu2422-gaba f77a mutant receptor in complex with leucine (see paper)
28% identity, 90% coverage: 37:377/377 of query aligns to 11:347/348 of 3ipcA
3ip9A Structure of atu2422-gaba receptor in complex with gaba (see paper)
28% identity, 90% coverage: 37:377/377 of query aligns to 11:347/348 of 3ip9A
3ip7A Structure of atu2422-gaba receptor in complex with valine (see paper)
28% identity, 90% coverage: 37:377/377 of query aligns to 11:347/348 of 3ip7A
3ip6A Structure of atu2422-gaba receptor in complex with proline (see paper)
28% identity, 90% coverage: 37:377/377 of query aligns to 11:347/348 of 3ip6A
3ip5A Structure of atu2422-gaba receptor in complex with alanine (see paper)
28% identity, 90% coverage: 37:377/377 of query aligns to 11:347/348 of 3ip5A
>WP_015927086.1 NCBI__GCF_000022085.1:WP_015927086.1
MRVLMRGLVAAALLAGAVTGAAAQDKTPVKLGAIEILTGPNSRYGIAIQRGFDLAAAEIN
KGGGVLGGRPLALVYEDSAGAKEQALNAARKLIGRDKVPLILGPTLSNEMFAAGPVANER
KVPIVGTSTTANGITAIGPYVFRTSLPEADVIPVTLRTAKEKFGIKRVAVMYGNDDAFTK
SAYDVMKGALDKLGIEVLTTETFGSKDTDFSAQLTKIKGLNPDAIVLSALVEAASGIALQ
ARQLGIDPKVFIIGGNGLNSPKLGEIAGAAADGTIVGSPWFIGKKDPANQAFVASFREKY
GDSPDQFAAQAYDTLFIVAKAIDAAGAPESEKIKDALIKVKHTGVMGPFSFSESRDPADT
SGVVVLTMKGGKFQLLE
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory