SitesBLAST – Find functional sites

 

SitesBLAST

Comparing WP_015944234.1 NCBI__GCF_000021925.1:WP_015944234.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 3 hits to proteins with known functional sites (download)

A0A0H2ZQB9 Ergothioneine transporter EgtUBC from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
55% identity, 69% coverage: 60:209/218 of query aligns to 54:203/506 of A0A0H2ZQB9

query
sites
A0A0H2ZQB9
V
 
V
L
 
L
G
 
Q
V
 
I
A
 
A
G
 
G
I
 
I
L
 
F
Q
 
Q
T
 
T
I
 
I
P
 
P
G
 
S
L
 
L
A
 
A
L
 
L
L
 
L
G
 
G
F
 
L
M
 
F
I
 
I
P
 
P
L
 
L
F
 
M
G
 
G
I
 
I
G
 
G
I
 
T
K
 
L
T
 
P
A
 
A
V
 
L
A
 
T
A
 
A
L
 
L
F
 
V
L
 
I
Y
 
Y
S
 
A
L
 
I
L
 
F
P
 
P
I
 
I
I
 
L
R
 
Q
N
 
N
T
 
T
F
 
I
T
 
T
G
 
G
I
 
L
K
 
K
D
 
G
V
 
I
D
 
D
K
 
P
A
 
S
T
 
L
I
 
Q
E
 
E
A
 
A
A
 
G
K
 
I
G
 
A
M
 
F
G
 
G
M
 
M
T
 
T
D
 
R
W
 
W
Q
 
E
I
 
R
L
 
L
T
 
K
K
 
K
V
 
F
Q
 
E
L
 
I
P
 
P
L
 
L
A
 
A
L
 
M
S
 
P
V
 
V
M
 
I
M
 
M
A
 
S
G
 
G
I
 
I
R
 
R
T
 
T
A
 
A
T
 
A
V
 
V
I
 
L
N
 
I
V
 
I
G
 
G
T
 
T
A
 
A
T
 
T
L
 
L
A
 
A
A
 
T
F
 
L
I
 
I
G
 
G
A
 
A
G
 
G
G
 
G
L
 
L
G
 
G
D
 
S
F
 
F
I
 
I
F
 
L
I
 
L
G
 
G
I
 
I
S
 
D
R
 
R
N
 
N
L
 
N
D
 
A
A
 
S
L
 
L
V
 
I
L
 
L
I
 
I
G
 
G
A
 
A
F
 
L
P
 
S
A
 
S
A
 
A
L
 
V
L
 
L
A
 
A
L
 
I
L
 
A
L
 
F
D
 
N
W
 
F
L
 
L
L
 
L
G
 
K
R
 
V
L
 
M
E
 
E
K
 
K

Sites not aligning to the query:

B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
33% identity, 95% coverage: 5:211/218 of query aligns to 37:243/553 of B5Z7I3

query
sites
B5Z7I3
S
 
S
L
 
V
W
 
V
T
 
K
Q
 
Y
I
 
L
I
 
I
L
 
K
Q
 
E
L
 
F
E
 
H
M
 
D
R
 
R
W
 
F
P
 
I
D
 
Y
L
 
F
T
 
I
A
 
D
A
 
L
L
 
L
L
 
A
Q
 
Q
H
 
H
I
 
F
E
 
I
L
 
I
V
 
V
F
 
A
I
 
L
S
 
S
M
 
G
L
 
F
I
 
L
A
 
V
I
 
L
T
 
V
I
 
F
G
 
G
V
 
V
P
 
L
L
 
I
G
 
G
I
 
V
L
 
F
I
 
A
T
 
F
R
 
Y
V
 
N
K
 
S
A
 
K
L
 
A
E
 
R
G
 
A
P
 
F
V
 
L
L
 
L
G
 
P
V
 
V
A
 
V
G
 
N
I
 
F
L
 
L
Q
 
Y
T
 
T
I
 
I
P
 
P
G
 
S
L
 
L
A
 
A
L
 
L
L
 
F
G
 
A
F
 
L
M
 
F
I
 
I
P
 
P
L
 
V
F
 
I
G
 
G
I
 
V
G
 
G
I
 
L
K
 
K
T
 
N
A
 
A
V
 
L
A
 
L
A
 
V
L
 
L
F
 
V
L
 
L
Y
 
Y
S
 
G
L
 
L
L
 
L
P
 
P
I
 
I
I
 
V
R
 
Y
N
 
S
T
 
T
F
 
Y
T
 
N
G
 
A
I
 
L
K
 
K
D
 
E
V
 
V
D
 
R
K
 
E
A
 
E
T
 
V
I
 
I
E
 
K
A
 
A
A
 
A
K
 
I
G
 
G
M
 
L
G
 
G
M
 
C
T
 
N
D
 
P
W
 
K
Q
 
E
I
 
L
L
 
F
T
 
F
K
 
R
V
 
V
Q
 
H
L
 
F
P
 
L
L
 
L
A
 
A
L
 
I
S
 
P
V
 
Q
M
 
I
M
 
L
A
 
A
G
 
G
I
 
L
R
 
R
T
 
I
A
 
A
T
 
V
V
 
V
I
 
M
N
 
L
V
 
V
G
 
A
T
 
M
A
 
A
T
 
G
L
 
I
A
 
G
A
 
A
F
 
L
I
 
I
G
 
G
A
 
A
G
 
G
G
 
G
L
 
L
G
 
G
D
 
Q
F
 
A
I
 
I
F
 
F
I
 
R
G
 
G
I
 
L
S
 
N
R
 
T
N
 
Q
L
 
N
D
 
T
A
 
T
L
 
L
V
 
L
L
 
V
I
 
A
G
 
G
A
 
S
F
 
L
P
 
I
A
 
I
A
 
A
L
 
L
L
 
F
A
 
S
L
 
V
L
 
L
L
 
A
D
 
D
W
 
K
L
 
F
L
 
V
G
 
S
R
 
V
L
 
F
E
 
Q
K
 
H
T
 
E
T
 
N

Sites not aligning to the query:

8wm8B Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with nitrate (see paper)
28% identity, 64% coverage: 66:205/218 of query aligns to 112:255/265 of 8wm8B

query
sites
8wm8B
I
 
V
L
 
L
Q
 
R
T
 
T
I
 
V
P
 
P
G
 
P
L
 
L
A
 
A
L
 
W
L
 
L
G
 
P
F
 
I
M
 
S
I
 
L
P
 
A
L
 
A
F
 
F
G
 
Q
I
 
Q
G
 
A
I
 
N
K
 
P
T
 
S
A
 
A
V
 
I
A
 
F
A
 
V
L
 
I
F
 
F
L
 
I
Y
 
T
S
 
S
L
 
I
L
 
W
P
 
P
I
 
I
I
 
L
R
 
L
N
 
N
T
 
T
F
 
T
T
 
V
G
 
G
I
 
V
K
 
Q
D
 
Q
V
 
I
D
 
P
K
 
Q
A
 
D
T
 
Y
I
 
I
E
 
N
A
 
V
A
 
A
K
 
K
G
 
V
M
 
L
G
 
R
M
 
L
T
 
K
D
 
G
W
 
V
Q
 
K
I
 
Y
L
 
F
T
 
F
K
 
K
V
 
I
Q
 
V
L
 
F
P
 
P
L
 
A
A
 
T
L
 
V
S
 
P
V
 
Y
M
 
I
M
 
F
A
 
T
G
 
G
I
 
L
R
 
R
T
 
-
A
 
-
T
 
-
V
 
-
I
 
I
N
 
G
V
 
I
G
 
G
T
 
L
A
 
S
T
 
W
L
|
L
A
 
A
-
 
I
-
 
V
-
x
A
-
 
A
-
 
E
A
 
M
F
 
L
I
 
V
G
 
G
A
 
G
G
 
V
G
 
G
L
 
I
G
 
G
D
 
S
F
 
F
I
 
I
F
 
W
I
 
D
G
 
A
I
 
Y
S
 
N
-
 
T
-
 
T
-
 
T
-
 
E
R
 
T
N
 
N
L
 
L
D
 
S
A
 
E
L
 
I
V
 
I
L
 
L
I
 
A
G
 
L
A
 
I
F
 
Y
P
 
-
A
 
V
A
 
G
L
 
L
L
 
V
A
 
G
L
 
L
L
 
L
L
 
L
D
 
D
W
 
R
L
 
L
L
 
V
G
 
G

Query Sequence

>WP_015944234.1 NCBI__GCF_000021925.1:WP_015944234.1
MRNESLWTQIILQLEMRWPDLTAALLQHIELVFISMLIAITIGVPLGILITRVKALEGPV
LGVAGILQTIPGLALLGFMIPLFGIGIKTAVAALFLYSLLPIIRNTFTGIKDVDKATIEA
AKGMGMTDWQILTKVQLPLALSVMMAGIRTATVINVGTATLAAFIGAGGLGDFIFIGISR
NLDALVLIGAFPAALLALLLDWLLGRLEKTTTPRGLKV

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory