Comparing WP_015944234.1 NCBI__GCF_000021925.1:WP_015944234.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
A0A0H2ZQB9 Ergothioneine transporter EgtUBC from Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) (see paper)
55% identity, 69% coverage: 60:209/218 of query aligns to 54:203/506 of A0A0H2ZQB9
Sites not aligning to the query:
B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
33% identity, 95% coverage: 5:211/218 of query aligns to 37:243/553 of B5Z7I3
Sites not aligning to the query:
8wm8B Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with nitrate (see paper)
28% identity, 64% coverage: 66:205/218 of query aligns to 112:255/265 of 8wm8B
>WP_015944234.1 NCBI__GCF_000021925.1:WP_015944234.1
MRNESLWTQIILQLEMRWPDLTAALLQHIELVFISMLIAITIGVPLGILITRVKALEGPV
LGVAGILQTIPGLALLGFMIPLFGIGIKTAVAALFLYSLLPIIRNTFTGIKDVDKATIEA
AKGMGMTDWQILTKVQLPLALSVMMAGIRTATVINVGTATLAAFIGAGGLGDFIFIGISR
NLDALVLIGAFPAALLALLLDWLLGRLEKTTTPRGLKV
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory