Comparing WP_017596752.1 NCBI__GCF_000341125.1:WP_017596752.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3c4jA Abc protein artp in complex with atp-gamma-s
61% identity, 92% coverage: 23:266/266 of query aligns to 9:242/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
61% identity, 92% coverage: 23:266/266 of query aligns to 9:242/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
61% identity, 92% coverage: 23:266/266 of query aligns to 9:242/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
61% identity, 92% coverage: 23:266/266 of query aligns to 9:242/242 of 2oljA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
62% identity, 92% coverage: 22:266/266 of query aligns to 7:240/241 of 4u00A
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
56% identity, 94% coverage: 17:266/266 of query aligns to 1:240/240 of 4ymuJ
1b0uA Atp-binding subunit of the histidine permease from salmonella typhimurium (see paper)
55% identity, 91% coverage: 22:263/266 of query aligns to 7:250/258 of 1b0uA
P02915 Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP; EC 7.4.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
54% identity, 92% coverage: 22:266/266 of query aligns to 11:257/258 of P02915
P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 3 papers)
37% identity, 94% coverage: 17:266/266 of query aligns to 1:245/343 of P30750
Sites not aligning to the query:
3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form (see paper)
37% identity, 94% coverage: 17:266/266 of query aligns to 2:246/344 of 3tuzC
Sites not aligning to the query:
3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form (see paper)
37% identity, 94% coverage: 17:266/266 of query aligns to 2:246/344 of 3tuiC
6cvlD Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
37% identity, 94% coverage: 17:266/266 of query aligns to 2:246/344 of 6cvlD
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
36% identity, 96% coverage: 11:265/266 of query aligns to 11:251/378 of P69874
Sites not aligning to the query:
7ahhC Opua inhibited inward-facing, sbd docked (see paper)
35% identity, 85% coverage: 37:262/266 of query aligns to 46:263/382 of 7ahhC
Sites not aligning to the query:
7aheC Opua inhibited inward facing (see paper)
35% identity, 85% coverage: 37:262/266 of query aligns to 46:263/382 of 7aheC
Sites not aligning to the query:
1g291 Malk (see paper)
36% identity, 91% coverage: 22:262/266 of query aligns to 8:240/372 of 1g291
Sites not aligning to the query:
7ahdC Opua (e190q) occluded (see paper)
35% identity, 83% coverage: 37:256/266 of query aligns to 46:257/260 of 7ahdC
Sites not aligning to the query:
2pclA Crystal structure of abc transporter with complex (aq_297) from aquifex aeolicus vf5
41% identity, 84% coverage: 20:242/266 of query aligns to 6:219/223 of 2pclA
2d62A Crystal structure of multiple sugar binding transport atp- binding protein
33% identity, 91% coverage: 22:262/266 of query aligns to 11:243/375 of 2d62A
5ws4A Crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii (see paper)
39% identity, 80% coverage: 16:227/266 of query aligns to 3:209/650 of 5ws4A
>WP_017596752.1 NCBI__GCF_000341125.1:WP_017596752.1
MAEISENPVPPGDADALVVADNVHKRFGRLEVLRGIDLTVKRGEVMCVIGPSGSGKSTFL
RCINHLEKLSAGRLWVNGELMGYRQKGGRLYELRDHEIAAQRRDIGMVFQRFNLFPHLSV
LGNVIEAPVQVKRVPRAQATEKAMELLEKVGLPDKADAYPEQLSGGQQQRVAIARALAME
PSLMLFDEPTSALDPELVGEVLDVMRDLAEGGMTMVVVTHEMGFAREVGDSLVFMDEGVV
VESGDPRDVLTDPGHERTQAFLSKVL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory