Comparing WP_017751403.1 NCBI__GCF_000816635.1:WP_017751403.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2x5dD Crystal structure of a probable aminotransferase from pseudomonas aeruginosa (see paper)
39% identity, 91% coverage: 28:381/391 of query aligns to 15:372/380 of 2x5dD
6l1nA Substrate bound bacf structure from bacillus subtillis (see paper)
37% identity, 93% coverage: 18:382/391 of query aligns to 19:385/393 of 6l1nA
Sites not aligning to the query:
6l1oB Product bound bacf structure from bacillus subtillis (see paper)
36% identity, 97% coverage: 4:382/391 of query aligns to 6:386/392 of 6l1oB
6l1lB Apo-bacf structure from bacillus subtillis (see paper)
36% identity, 97% coverage: 4:382/391 of query aligns to 6:386/393 of 6l1lB
2o1bA Structure of aminotransferase from staphylococcus aureus
34% identity, 88% coverage: 32:376/391 of query aligns to 21:364/376 of 2o1bA
3jtxB Crystal structure of aminotransferase (np_283882.1) from neisseria meningitidis z2491 at 1.91 a resolution
27% identity, 96% coverage: 7:380/391 of query aligns to 5:388/393 of 3jtxB
2o0rA The three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis (see paper)
28% identity, 74% coverage: 90:380/391 of query aligns to 85:380/385 of 2o0rA
Sites not aligning to the query:
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
25% identity, 97% coverage: 3:382/391 of query aligns to 7:393/402 of P14909
Sites not aligning to the query:
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
24% identity, 97% coverage: 2:381/391 of query aligns to 9:379/384 of 1o4sB
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
25% identity, 93% coverage: 18:382/391 of query aligns to 19:394/400 of Q02635
Sites not aligning to the query:
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
25% identity, 93% coverage: 18:382/391 of query aligns to 18:393/399 of 6f77A
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
24% identity, 90% coverage: 30:382/391 of query aligns to 25:380/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
24% identity, 90% coverage: 30:382/391 of query aligns to 25:380/388 of 1gd9A
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
23% identity, 96% coverage: 4:380/391 of query aligns to 15:402/410 of P58350
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
24% identity, 91% coverage: 29:382/391 of query aligns to 30:388/391 of 8wkjA
6f35A Crystal structure of the aspartate aminotranferase from rhizobium meliloti (see paper)
23% identity, 96% coverage: 4:380/391 of query aligns to 5:392/400 of 6f35A
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
25% identity, 92% coverage: 25:383/391 of query aligns to 24:395/399 of 5wmhA
1xi9C Alanine aminotransferase from pyrococcus furiosus pfu-1397077-001
27% identity, 92% coverage: 24:382/391 of query aligns to 22:388/393 of 1xi9C
Q58097 (5-formylfuran-3-yl)methyl phosphate transaminase; 4-HFC-P:alanine aminotransferase; EC 2.6.1.108 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
26% identity, 92% coverage: 24:382/391 of query aligns to 23:366/370 of Q58097
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
25% identity, 92% coverage: 26:383/391 of query aligns to 25:395/402 of 5wmiA
Sites not aligning to the query:
>WP_017751403.1 NCBI__GCF_000816635.1:WP_017751403.1
MIFSSKMNQLTSAIFSQLSYKKDKLLSQGREIIDFSIGTPDIPPAPHIVDTIVEESKKIE
NYVYAINDSQELINSVKNWYSRRYKVNLEDDEILSLLGSQSGFAELSLSLVNSGDVVLTP
DPGYPIFTIGPYLAGAKIVKMPLLKENNYLVDFDSIDEKTAKMAKLMVVSYPNNPTAASA
PRDFYVKLVAFAKKYNIMVLHDNAYSELVFDGSEGGSFLSIPGAIDIGIEFNSLSKTYSI
PGCRIAFAVGNKDIINQLKILKSHIDYGMFIPFQKAAIAALNGPQDYVGFVKETYRKRRD
LLVEGLSKIGWHIDNTGGSMFVWAAIPSKYDSSLEFTFDLMEKTGVIVVPGSSFGERGEG
FVRFALVQNEDSINKAIHNIEKSSILKNGRS
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory