SitesBLAST
Comparing WP_018234152.1 NCBI__GCF_000378965.1:WP_018234152.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
5zaiC Crystal structure of 3-hydroxypropionyl-coa dehydratase from metallosphaera sedula (see paper)
28% identity, 69% coverage: 14:204/276 of query aligns to 5:183/259 of 5zaiC
- active site: A65 (≠ G79), F70 (= F84), S82 (≠ V97), R86 (≠ Q101), G110 (= G131), E113 (= E134), P132 (= P153), E133 (= E154), I138 (≠ L159), P140 (= P161), G141 (= G162)
- binding coenzyme a: K24 (≠ P32), L25 (≠ R33), A63 (≠ L77), G64 (= G78), A65 (≠ G79), D66 (= D80), I67 (≠ L81), P132 (= P153), R166 (≠ L187)
Sites not aligning to the query:
6yswA E. Coli anaerobic trifunctional enzyme subunit-alpha in complex with coenzyme a
31% identity, 61% coverage: 66:232/276 of query aligns to 53:215/707 of 6yswA
- active site: A66 (≠ G79), I71 (≠ F84), A84 (≠ V97), Q88 (= Q101), G112 (= G131), E115 (= E134), P136 (= P153), E137 (= E154), G145 (= G162)
- binding coenzyme a: A66 (≠ G79), D67 (= D80), I68 (≠ L81), P136 (= P153), E137 (= E154), L140 (≠ F157)
Sites not aligning to the query:
P40939 Trifunctional enzyme subunit alpha, mitochondrial; 78 kDa gastrin-binding protein; Monolysocardiolipin acyltransferase; TP-alpha; EC 2.3.1.-; EC 4.2.1.17; EC 1.1.1.211 from Homo sapiens (Human) (see 5 papers)
30% identity, 65% coverage: 36:214/276 of query aligns to 64:234/763 of P40939
Sites not aligning to the query:
- 282 V → D: in MTPD1; mild phenotype with slowly progressive myopathy and sensorimotor polyneuropathy; dbSNP:rs137852773
- 305 I → N: in MTPD1; mild phenotype with slowly progressive myopathy and sensorimotor polyneuropathy; dbSNP:rs137852774
- 342 L → P: in LCHAD deficiency; dbSNP:rs137852772
- 510 active site, For hydroxyacyl-coenzyme A dehydrogenase activity; E → Q: in AFLP and LCHAD deficiency; loss of long-chain-3-hydroxyacyl-CoA dehydrogenase activity; dbSNP:rs137852769
3h81A Crystal structure of enoyl-coa hydratase from mycobacterium tuberculosis (see paper)
29% identity, 58% coverage: 45:204/276 of query aligns to 29:180/256 of 3h81A
- active site: A64 (≠ G79), M69 (≠ F84), T79 (≠ R94), F83 (≠ L96), G107 (= G131), E110 (= E134), P129 (= P153), E130 (= E154), V135 (≠ L159), P137 (= P161), G138 (= G162)
Sites not aligning to the query:
3q0jC Crystal structure of the mycobacterium tuberculosis crotonase in complex with the inhibitor acetoacetylcoa
29% identity, 58% coverage: 45:204/276 of query aligns to 30:181/255 of 3q0jC
- active site: A65 (≠ G79), M70 (≠ F84), T80 (≠ R94), F84 (≠ L96), G108 (= G131), E111 (= E134), P130 (= P153), E131 (= E154), V136 (≠ L159), P138 (= P161), G139 (= G162)
- binding acetoacetyl-coenzyme a: A63 (≠ L77), G64 (= G78), A65 (≠ G79), D66 (= D80), I67 (≠ L81), K68 (≠ D82), M70 (≠ F84), F84 (≠ L96), G107 (= G130), G108 (= G131), E111 (= E134), P130 (= P153), E131 (= E154), P138 (= P161), G139 (= G162), M140 (= M163)
Sites not aligning to the query:
3q0gC Crystal structure of the mycobacterium tuberculosis crotonase bound to a reaction intermediate derived from crotonyl coa
29% identity, 58% coverage: 45:204/276 of query aligns to 30:181/255 of 3q0gC
- active site: A65 (≠ G79), M70 (≠ F84), T80 (≠ R94), F84 (≠ L96), G108 (= G131), E111 (= E134), P130 (= P153), E131 (= E154), V136 (≠ L159), P138 (= P161), G139 (= G162)
- binding coenzyme a: A63 (≠ L77), I67 (≠ L81), K68 (≠ D82), Y104 (≠ D127), P130 (= P153), E131 (= E154), L134 (≠ F157)
Sites not aligning to the query:
3q0gD Crystal structure of the mycobacterium tuberculosis crotonase bound to a reaction intermediate derived from crotonyl coa
40% identity, 31% coverage: 120:204/276 of query aligns to 92:176/250 of 3q0gD
Sites not aligning to the query:
5jbxB Crystal structure of liuc in complex with coenzyme a and malonic acid (see paper)
27% identity, 66% coverage: 25:207/276 of query aligns to 18:188/261 of 5jbxB
- active site: A67 (≠ G79), R72 (≠ F84), L84 (≠ V97), R88 (≠ Q101), G112 (= G131), E115 (= E134), T134 (≠ P153), E135 (= E154), I140 (≠ L159), P142 (= P161), G143 (= G162)
- binding coenzyme a: S24 (≠ H31), R25 (≠ P32), R26 (= R33), A28 (≠ C35), A65 (≠ L77), D68 (= D80), L69 (= L81), K70 (≠ D82), L110 (= L129), G111 (= G130), T134 (≠ P153), E135 (= E154), L138 (≠ F157), R168 (≠ L187)
Sites not aligning to the query:
6eqoA Tri-functional propionyl-coa synthase of erythrobacter sp. Nap1 with bound NADP+ and phosphomethylphosphonic acid adenylate ester (see paper)
37% identity, 46% coverage: 121:248/276 of query aligns to 955:1095/1804 of 6eqoA
Sites not aligning to the query:
- active site: 918
- binding phosphomethylphosphonic acid adenylate ester: 456, 458, 535, 536, 537, 538, 558, 559, 560, 561, 562, 688, 714
- binding nadp nicotinamide-adenine-dinucleotide phosphate: 1261, 1265, 1379, 1400, 1403, 1404, 1405, 1424, 1425, 1429, 1444, 1492, 1493, 1497, 1514, 1517, 1713, 1730, 1731, 1774
Q08426 Peroxisomal bifunctional enzyme; PBE; PBFE; L-bifunctional protein; LBP; Multifunctional enzyme 1; MFE1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Homo sapiens (Human) (see 5 papers)
30% identity, 50% coverage: 120:258/276 of query aligns to 90:220/723 of Q08426
- K165 (≠ A195) modified: N6-acetyllysine; alternate; mutation to Q: Greatly reduced acetylation and insensitive to treatment with TSA and NAM; when associated with Q-171; Q-346 and Q-584.
- K171 (≠ V201) modified: N6-acetyllysine; mutation to Q: Greatly reduced acetylation and insensitive to treatment with TSA and NAM; when associated with Q-165; Q-346 and Q-584.
Sites not aligning to the query:
- 3 E → K: in FRTS3; the mutant is mistargeted to mitochondria; results in impaired mitochondrial oxidative phosphorylation and defects in the transport of fluids across the epithelium of renal proximal tubular cells; dbSNP:rs398124646
- 40 V → G: in dbSNP:rs1062551
- 41 I → R: in dbSNP:rs1062552
- 75 T → I: in dbSNP:rs1062553
- 274 A → T: in dbSNP:rs2302819
- 325 A → G: in dbSNP:rs1062555
- 346 modified: N6-acetyllysine; K→Q: Greatly reduced acetylation and insensitive to treatment with TSA and NAM; when associated with Q-165; Q-171 and Q-584.
- 584 modified: N6-acetyllysine; alternate; K→Q: Greatly reduced acetylation and insensitive to treatment with TSA and NAM; when associated with Q-165; Q-171 and Q-346.
- 598 K → T: in dbSNP:rs1042437
- 606 T → P: in dbSNP:rs1042438
2dubA Enoyl-coa hydratase complexed with octanoyl-coa (see paper)
34% identity, 39% coverage: 121:229/276 of query aligns to 95:200/254 of 2dubA
- active site: G105 (= G131), E108 (= E134), P127 (= P153), E128 (= E154), T133 (≠ L159), P135 (= P161), G136 (= G162)
- binding octanoyl-coenzyme a: G105 (= G131), E108 (= E134), P127 (= P153), E128 (= E154), G136 (= G162), A137 (≠ M163)
Sites not aligning to the query:
- active site: 67, 72, 82, 221, 231
- binding octanoyl-coenzyme a: 25, 26, 27, 29, 65, 67, 68, 69, 70
1mj3A Crystal structure analysis of rat enoyl-coa hydratase in complex with hexadienoyl-coa (see paper)
34% identity, 39% coverage: 121:229/276 of query aligns to 99:204/258 of 1mj3A
- active site: G109 (= G131), E112 (= E134), P131 (= P153), E132 (= E154), T137 (≠ L159), P139 (= P161), G140 (= G162)
- binding hexanoyl-coenzyme a: G109 (= G131), P131 (= P153), E132 (= E154), L135 (≠ F157), G140 (= G162)
Sites not aligning to the query:
- active site: 68, 73, 83, 85, 225, 235
- binding hexanoyl-coenzyme a: 26, 27, 28, 30, 66, 67, 68, 69, 70
1dubA 2-enoyl-coa hydratase, data collected at 100 k, ph 6.5 (see paper)
34% identity, 39% coverage: 121:229/276 of query aligns to 101:206/260 of 1dubA
- active site: G111 (= G131), E114 (= E134), P133 (= P153), E134 (= E154), T139 (≠ L159), P141 (= P161), G142 (= G162)
- binding acetoacetyl-coenzyme a: Y107 (≠ D127), G110 (= G130), G111 (= G131), E114 (= E134), P133 (= P153), E134 (= E154), L137 (≠ F157), G142 (= G162)
Sites not aligning to the query:
- active site: 68, 73, 83, 87, 227, 237
- binding acetoacetyl-coenzyme a: 26, 27, 28, 30, 66, 68, 69, 70, 233, 249
1ey3A Structure of enoyl-coa hydratase complexed with the substrate dac-coa (see paper)
34% identity, 39% coverage: 121:229/276 of query aligns to 99:204/258 of 1ey3A
- active site: G109 (= G131), E112 (= E134), P131 (= P153), E132 (= E154), T137 (≠ L159), P139 (= P161), G140 (= G162)
- binding 4-(n,n-dimethylamino)cinnamoyl-coa: G109 (= G131), P131 (= P153), L135 (≠ F157), G140 (= G162)
Sites not aligning to the query:
- active site: 66, 71, 81, 85, 225, 235
- binding 4-(n,n-dimethylamino)cinnamoyl-coa: 24, 26, 28, 64, 65, 66, 67, 68, 85, 88
P14604 Enoyl-CoA hydratase, mitochondrial; mECH; mECH1; Enoyl-CoA hydratase 1; ECHS1; Short-chain enoyl-CoA hydratase; SCEH; EC 4.2.1.17; EC 5.3.3.8 from Rattus norvegicus (Rat) (see 3 papers)
34% identity, 40% coverage: 120:229/276 of query aligns to 130:236/290 of P14604
- E144 (= E134) mutation to D: Reduces activity 50-fold.; mutation to Q: Reduces activity 3300-fold.
- E164 (= E154) mutation to D: Reduces activity 1250-fold.; mutation to Q: Reduces activity 330000-fold.
Sites not aligning to the query:
- 1:29 modified: transit peptide, Mitochondrion
Q4WF54 Mevalonyl-coenzyme A hydratase sidH; Siderophore biosynthesis protein H; EC 4.2.1.- from Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata) (see paper)
29% identity, 62% coverage: 30:200/276 of query aligns to 29:186/270 of Q4WF54
Sites not aligning to the query:
- 268:270 PTS1-type peroxisomal targeting signal
1wdlA Fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form ii (native4) (see paper)
31% identity, 44% coverage: 117:237/276 of query aligns to 103:211/715 of 1wdlA
Sites not aligning to the query:
- active site: 69, 89, 93, 430, 451, 463, 501
- binding nicotinamide-adenine-dinucleotide: 322, 324, 325, 344, 345, 400, 401, 403, 428, 429, 430
P28793 Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi (see paper)
31% identity, 44% coverage: 117:237/276 of query aligns to 103:211/715 of P28793
Sites not aligning to the query:
- 297 binding substrate
- 325 binding NAD(+)
- 344 binding NAD(+)
- 401:403 binding NAD(+)
- 408 binding NAD(+)
- 430 binding NAD(+)
- 454 binding NAD(+)
- 501 binding substrate
- 660 binding substrate
1wdmA Fatty acid beta-oxidation multienzyme complex from pseudomonas fragi, form i (native3) (see paper)
31% identity, 44% coverage: 117:237/276 of query aligns to 103:211/707 of 1wdmA
Sites not aligning to the query:
- active site: 69, 89, 93, 430, 451, 463, 501
- binding acetyl coenzyme *a: 297, 459, 501, 534, 652, 658
- binding nicotinamide-adenine-dinucleotide: 321, 322, 324, 325, 344, 401, 403, 428, 430, 454
2hw5C The crystal structure of human enoyl-coenzyme a (coa) hydratase short chain 1, echs1
35% identity, 30% coverage: 121:204/276 of query aligns to 101:184/260 of 2hw5C
Sites not aligning to the query:
- active site: 68, 73, 83, 87, 227, 237
- binding crotonyl coenzyme a: 26, 27, 28, 30, 62, 70
Query Sequence
>WP_018234152.1 NCBI__GCF_000378965.1:WP_018234152.1
MSTTNNKNTFKHLTLSYDDKRRTYWCRLHPHPRPCFSSELLGELSQVSTRIPKEVTTLQS
EPHYFVLCSDIPGVFNLGGDLDLFAQLVRERNYRGLVEYGQKCLRMVTANSSGLQGHATT
IALVQGDALGGGFEAALAAHVLIAEEGTKLGFPEVLFNLFPGMGAYHMLSRRLPVKRAEQ
LMLSGELYSAEDLHARGVVDVLAPRGQGSEAVEEYIRSERAYARGAAAIRRIGGHLDQVP
ASSLSDVVTLWVDSAMRLTERDLKLMGRIVSRQNHL
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory