SitesBLAST
Comparing WP_020173599.1 NCBI__GCF_000385335.1:WP_020173599.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
7rbxC Crystal structure of isocitrate lyase and phosphorylmutase:isocitrate lyase from brucella melitensis biovar abortus 2308 bound to itaconic acid (see paper)
73% identity, 96% coverage: 7:427/438 of query aligns to 3:424/425 of 7rbxC
6lrtA Crystal structure of isocitrate lyase (caur_3889) from chloroflexus aurantiacus in complex with isocitrate and manganese ion
71% identity, 93% coverage: 18:426/438 of query aligns to 18:423/423 of 6lrtA
7cmyC Isocitrate lyase from bacillus cereus atcc 14579 in complex with magnessium ion, glyoxylate, and succinate
66% identity, 93% coverage: 18:426/438 of query aligns to 17:417/417 of 7cmyC
7rb1A Isocitrate lyase-1 from mycobacterium tuberculosis covalently modified by 5-descarboxy-5-nitro-d-isocitric acid (see paper)
59% identity, 93% coverage: 18:426/438 of query aligns to 22:427/427 of 7rb1A
- binding dihydroxyacetic acid: Y89 (= Y85), S91 (= S87), W93 (= W89), D153 (= D148), R228 (= R223), T347 (= T345)
- binding (3E)-3-(hydroxyimino)propanoic acid: C191 (= C186), G192 (= G187), H193 (= H188), R228 (= R223), S315 (= S313), S317 (= S315), T347 (= T345)
- binding magnesium ion: A276 (= A274), A279 (≠ S277), Q308 (≠ K306)
6wsiA Intact cis-2,3-epoxysuccinic acid bound to isocitrate lyase-1 from mycobacterium tuberculosis (see paper)
59% identity, 93% coverage: 18:426/438 of query aligns to 22:427/427 of 6wsiA
- active site: Y89 (= Y85), D108 (= D104), D153 (= D148), E155 (= E150), H180 (= H175), E182 (= E177), C191 (= C186), H193 (= H188), R228 (= R223), E285 (= E283), Q308 (≠ K306), S315 (= S313), S317 (= S315)
- binding magnesium ion: A276 (= A274), A279 (≠ S277), Q308 (≠ K306)
- binding (2R,3S)-oxirane-2,3-dicarboxylic acid: C191 (= C186), G192 (= G187), H193 (= H188), R228 (= R223), E285 (= E283), N313 (= N311), S315 (= S313), S317 (= S315), T347 (= T345)
6vb9A Covalent adduct of cis-2,3-epoxysuccinic acid with isocitrate lyase-1 from mycobacterium tuberculosis (see paper)
59% identity, 93% coverage: 18:426/438 of query aligns to 22:427/427 of 6vb9A
- active site: Y89 (= Y85), D108 (= D104), D153 (= D148), E155 (= E150), H180 (= H175), E182 (= E177), C191 (= C186), H193 (= H188), R228 (= R223), E285 (= E283), Q308 (≠ K306), S315 (= S313), S317 (= S315)
- binding magnesium ion: A276 (= A274), A279 (≠ S277), Q308 (≠ K306)
- binding oxalic acid: Y89 (= Y85), S91 (= S87), G92 (= G88), W93 (= W89), D153 (= D148), C191 (= C186), R228 (= R223), W283 (= W281), T347 (= T345)
5dqlA Crystal structure of 2-vinyl glyoxylate modified isocitrate lyase from mycobacterium tuberculosis (see paper)
59% identity, 93% coverage: 18:426/438 of query aligns to 22:427/427 of 5dqlA
- active site: Y89 (= Y85), D108 (= D104), D153 (= D148), E155 (= E150), H180 (= H175), E182 (= E177), C191 (= C186), H193 (= H188), R228 (= R223), E285 (= E283), Q308 (≠ K306), S315 (= S313), S317 (= S315)
- binding magnesium ion: A276 (= A274), A279 (≠ S277), Q308 (≠ K306)
- binding 4-hydroxy-2-oxobutanoic acid: W93 (= W89), D108 (= D104), C191 (= C186), H193 (= H188), S315 (= S313), S317 (= S315), T347 (= T345), L348 (= L346)
6xppA Crystal structure of itaconate modified mycobaterium tuberculosis isocitrate lyase (see paper)
59% identity, 93% coverage: 18:426/438 of query aligns to 21:426/426 of 6xppA
- active site: Y88 (= Y85), D107 (= D104), D152 (= D148), E154 (= E150), H179 (= H175), E181 (= E177), C190 (= C186), H192 (= H188), R227 (= R223), E284 (= E283), Q307 (≠ K306), S314 (= S313), S316 (= S315)
- binding 2-methylidenebutanedioic acid: W92 (= W89), C190 (= C186), H192 (= H188), R227 (= R223), N312 (= N311), S314 (= S313), S316 (= S315), T346 (= T345)
- binding magnesium ion: A275 (= A274), A278 (≠ S277), Q307 (≠ K306)
6c4aA Crystal structure of 3-nitropropionate modified isocitrate lyase from mycobacterium tuberculosis with pyruvate (see paper)
59% identity, 93% coverage: 18:426/438 of query aligns to 23:428/428 of 6c4aA
- active site: Y90 (= Y85), D109 (= D104), D154 (= D148), E156 (= E150), H181 (= H175), E183 (= E177), C192 (= C186), H194 (= H188), R229 (= R223), E286 (= E283), Q309 (≠ K306), S316 (= S313), S318 (= S315)
- binding 3-nitropropanoic acid: Y357 (≠ L354), S358 (= S355), R380 (≠ A377)
- binding magnesium ion: A277 (= A274), A280 (≠ S277), Q309 (≠ K306)
- binding pyruvic acid: Y90 (= Y85), S92 (= S87), G93 (= G88), W94 (= W89), D154 (= D148), C192 (= C186), R229 (= R223), W284 (= W281), T348 (= T345)
P9WKK7 Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
59% identity, 93% coverage: 18:426/438 of query aligns to 22:427/428 of P9WKK7
- SGW 91:93 (= SGW 87:89) binding substrate
- D153 (= D148) binding Mg(2+)
- C191 (= C186) mutation to S: Adopts a conformation almost identical to the wild-type.
- GH 192:193 (= GH 187:188) binding substrate
- R228 (= R223) binding substrate
- NCSPS 313:317 (= NCSPS 311:315) binding substrate
- K334 (≠ R332) modified: Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup)
- T347 (= T345) binding substrate
1f8iA Crystal structure of isocitrate lyase:nitropropionate:glyoxylate complex from mycobacterium tuberculosis (see paper)
59% identity, 93% coverage: 18:426/438 of query aligns to 22:427/427 of 1f8iA