Comparing WP_020562931.1 NCBI__GCF_000372865.1:WP_020562931.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12)
32% identity, 99% coverage: 1:357/361 of query aligns to 1:376/386 of P0A9J8
2qmxA The crystal structure of l-phe inhibited prephenate dehydratase from chlorobium tepidum tls (see paper)
36% identity, 73% coverage: 94:356/361 of query aligns to 4:273/278 of 2qmxA
3mwbA The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
37% identity, 73% coverage: 96:359/361 of query aligns to 5:277/306 of 3mwbA
3mwbB The crystal structure of prephenate dehydratase in complex with l-phe from arthrobacter aurescens to 2.0a
36% identity, 73% coverage: 96:359/361 of query aligns to 5:274/303 of 3mwbB
6vh5D Crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine
31% identity, 73% coverage: 94:356/361 of query aligns to 9:276/282 of 6vh5D
7am0B Gqqa- a novel type of quorum quenching acylases (see paper)
28% identity, 74% coverage: 94:359/361 of query aligns to 4:272/278 of 7am0B
3luyA Putative chorismate mutase from bifidobacterium adolescentis
21% identity, 73% coverage: 96:358/361 of query aligns to 8:285/326 of 3luyA
7alzA Gqqa- a novel type of quorum quenching acylases (see paper)
34% identity, 28% coverage: 258:359/361 of query aligns to 84:188/194 of 7alzA
5gmuB Crystal structure of chorismate mutase like domain of bifunctional dahp synthase of bacillus subtilis in complex with chlorogenic acid (see paper)
40% identity, 24% coverage: 3:90/361 of query aligns to 1:86/87 of 5gmuB
P39912 Protein AroA(G); EC 2.5.1.54; EC 5.4.99.5 from Bacillus subtilis (strain 168) (see paper)
40% identity, 24% coverage: 3:90/361 of query aligns to 2:87/358 of P39912
5j6fA Crystal structure of dah7ps-cm complex from geobacillus sp. With prephenate (see paper)
37% identity, 23% coverage: 7:90/361 of query aligns to 4:85/352 of 5j6fA
Sites not aligning to the query:
3nvtA 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7- phosphoheptulonate synthase/chorismate mutase (aroa) from listeria monocytogenes egd-e (see paper)
32% identity, 23% coverage: 9:90/361 of query aligns to 1:75/345 of 3nvtA
Sites not aligning to the query:
3tfcA 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7- phosphoheptulonate synthase/chorismate mutase (aroa) from listeria monocytogenes egd-e in complex with phosphoenolpyruvate (see paper)
31% identity, 22% coverage: 10:90/361 of query aligns to 1:74/343 of 3tfcA
Sites not aligning to the query:
P70080 Tryptophan 5-hydroxylase 1; Tryptophan 5-monooxygenase 1; EC 1.14.16.4 from Gallus gallus (Chicken) (see paper)
32% identity, 21% coverage: 276:352/361 of query aligns to 15:89/445 of P70080
Sites not aligning to the query:
5ckxD Non-covalent complex of dahp synthase and chorismate mutase from mycobacterium tuberculosis with bound transition state analog and feedback effectors tyrosine and phenylalanine (see paper)
42% identity, 17% coverage: 7:68/361 of query aligns to 3:60/79 of 5ckxD
Sites not aligning to the query:
P9WIC1 Intracellular chorismate mutase; CM; EC 5.4.99.5 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
39% identity, 20% coverage: 4:75/361 of query aligns to 26:93/105 of P9WIC1
Sites not aligning to the query:
>WP_020562931.1 NCBI__GCF_000372865.1:WP_020562931.1
MPSVTPLSELRDKIDRIDAEILRLINQRASYAKEVALTKIAAGEVGTFYRPDRESLVLRR
IHELNQGPLSDHTAVRFFRELMSACLALEQPLEVAFLGPEGTFTQQAAFKHFGHAINTVP
VASINEIFNSVELNKCHFGVVPVENSTEGVINHTLDRFLTSPLKICGEVEVKVHQNLMGH
TESLSEITEVFSHQQSLAQCRYWLDKYLPHARLTAVASNAEAARLASVNKSTAAVAGMVA
AEVYQLPVIEKNIEDEPNNTTRFIVIGQQTSSSTGKDKTSLVISTGNQPGALYKALEPFA
RFSIGMVNIESRPSRQGLWEYVFFIDIEGHSEDPNVAEALEILKGTVSMLKLLGSYPKAV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory