Comparing WP_020564705.1 NCBI__GCF_000372865.1:WP_020564705.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
2pc6A Crystal structure of putative acetolactate synthase- small subunit from nitrosomonas europaea (see paper)
67% identity, 100% coverage: 1:163/163 of query aligns to 2:164/164 of 2pc6A
A0QUX7 Acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
45% identity, 98% coverage: 3:161/163 of query aligns to 8:166/170 of A0QUX7
Q9FFF4 Acetolactate synthase small subunit 2, chloroplastic; ALS-interacting protein 3; Acetohydroxy-acid synthase small subunit 2; Protein valine-tolerant 1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
43% identity, 98% coverage: 2:160/163 of query aligns to 76:232/477 of Q9FFF4
Sites not aligning to the query:
P9WKJ3 Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
44% identity, 98% coverage: 3:161/163 of query aligns to 6:164/168 of P9WKJ3
6vz8F Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
41% identity, 97% coverage: 2:159/163 of query aligns to 4:158/159 of 6vz8F
Q93YZ7 Acetolactate synthase small subunit 1, chloroplastic; ALS-interacting protein 1; Acetohydroxyacid synthase small subunit 1 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
39% identity, 98% coverage: 2:160/163 of query aligns to 86:242/491 of Q93YZ7
Sites not aligning to the query:
O60086 Probable acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
30% identity, 96% coverage: 2:157/163 of query aligns to 70:265/289 of O60086
Sites not aligning to the query:
6vz8G Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound (see paper)
36% identity, 94% coverage: 3:156/163 of query aligns to 4:157/159 of 6vz8G
6wo1B Hybrid acetohydroxyacid synthase complex structure with cryptococcus neoformans ahas catalytic subunit and saccharomyces cerevisiae ahas regulatory subunit (see paper)
31% identity, 95% coverage: 2:156/163 of query aligns to 4:195/197 of 6wo1B
6u9dL Saccharomyces cerevisiae acetohydroxyacid synthase (see paper)
29% identity, 91% coverage: 2:150/163 of query aligns to 37:234/255 of 6u9dL
Sites not aligning to the query:
5yumA Crystallographic structures of ilvn.Val/ile complexes:conformational selectivity for feedback inhibition of ahass (see paper)
33% identity, 43% coverage: 4:73/163 of query aligns to 5:73/91 of 5yumA
5yppE Crystal structure of ilvn.Val-1a (see paper)
33% identity, 43% coverage: 4:73/163 of query aligns to 5:73/91 of 5yppE
>WP_020564705.1 NCBI__GCF_000372865.1:WP_020564705.1
MRHIISILMENESGALSRVAGLFSARGYNIESLTVAPTEDPTLSRMTIVTRGSDEIIEQI
TKQLNKLIDVVKLIDLAESAHIERELMLVKVRTTEQTRAEIRSMSDIFRGKIIDVTSSSY
VVEMTGPSEKLDAFIAGIDPDAIIEVVRSGPTGILRGEKGLHL
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory