Comparing WP_023431721.1 NCBI__GCF_000496075.1:WP_023431721.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P02911 Lysine/arginine/ornithine-binding periplasmic protein; LAO-binding protein from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 4 papers)
36% identity, 99% coverage: 1:254/257 of query aligns to 1:259/260 of P02911
P02910 Histidine-binding periplasmic protein; HBP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
37% identity, 90% coverage: 25:255/257 of query aligns to 25:260/260 of P02910
Sites not aligning to the query:
1hslA Refined 1.89 angstroms structure of the histidine-binding protein complexed with histidine and its relationship with many other active transport(slash)chemosensory receptors (see paper)
37% identity, 90% coverage: 25:255/257 of query aligns to 3:238/238 of 1hslA
5owfA Structure of a lao-binding protein mutant with glutamine (see paper)
37% identity, 86% coverage: 35:254/257 of query aligns to 11:234/235 of 5owfA
1lstA Three-dimensional structures of the periplasmic lysine-, arginine-, ornithine-binding protein with and without a ligand (see paper)
37% identity, 86% coverage: 35:254/257 of query aligns to 14:237/238 of 1lstA
1lahE Structural bases for multiple ligand specificity of the periplasmic lysine-, arginine-, ornithine-binding protein (see paper)
37% identity, 86% coverage: 35:254/257 of query aligns to 14:237/238 of 1lahE
1lagE Structural bases for multiple ligand specificity of the periplasmic lysine-, arginine-, ornithine-binding protein (see paper)
37% identity, 86% coverage: 35:254/257 of query aligns to 14:237/238 of 1lagE
1lafE Structural bases for multiple ligand specificity of the periplasmic lysine-, arginine-, ornithine-binding protein (see paper)
37% identity, 86% coverage: 35:254/257 of query aligns to 14:237/238 of 1lafE
Sites not aligning to the query:
P0AEU0 Histidine-binding periplasmic protein; HBP from Escherichia coli (strain K12) (see 3 papers)
36% identity, 90% coverage: 25:255/257 of query aligns to 25:260/260 of P0AEU0
Sites not aligning to the query:
5otcA Structure of the periplasmic binding protein (pbp) noct from agrobacterium tumefaciens c58 in complex with noroctopinic acid. (see paper)
35% identity, 84% coverage: 35:251/257 of query aligns to 12:251/256 of 5otcA
Sites not aligning to the query:
5otaA Structure of the periplasmic binding protein (pbp) noct from agrobacterium tumefaciens c58 in complex with octopinic acid (see paper)
35% identity, 84% coverage: 35:251/257 of query aligns to 12:251/254 of 5otaA
Sites not aligning to the query:
5ot9A Structure of the periplasmic binding protein (pbp) noct from a.Tumefaciens c58 in complex with histopine. (see paper)
35% identity, 84% coverage: 35:251/257 of query aligns to 12:251/254 of 5ot9A
Sites not aligning to the query:
4powA Structure of the pbp noct in complex with pyronopaline (see paper)
35% identity, 84% coverage: 35:251/257 of query aligns to 12:251/254 of 4powA
Sites not aligning to the query:
5ovzA High resolution structure of the pbp noct in complex with nopaline (see paper)
35% identity, 84% coverage: 35:251/257 of query aligns to 13:252/259 of 5ovzA
Sites not aligning to the query:
5itoA Structure of the periplasmic binding protein m117n-noct from a. Tumefaciens in complex with octopine (see paper)
35% identity, 84% coverage: 35:251/257 of query aligns to 13:252/255 of 5itoA
Sites not aligning to the query:
4zv2A An ancestral arginine-binding protein bound to glutamine (see paper)
37% identity, 87% coverage: 26:248/257 of query aligns to 6:223/225 of 4zv2A
4zv1A An ancestral arginine-binding protein bound to arginine (see paper)
38% identity, 87% coverage: 26:248/257 of query aligns to 6:225/226 of 4zv1A
8hqrA Crystal structure of the arginine-/lysine-binding protein sar11_1210 from 'candidatus pelagibacter ubique' htcc1062 bound to arginine
34% identity, 91% coverage: 18:251/257 of query aligns to 2:264/267 of 8hqrA
5t0wA Crystal structure of the ancestral amino acid-binding protein anccdt- 1, a precursor of cyclohexadienyl dehydratase
34% identity, 87% coverage: 26:249/257 of query aligns to 12:229/229 of 5t0wA