SitesBLAST
Comparing WP_024771447.1 NCBI__GCF_000520995.1:WP_024771447.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
2nwwA Crystal structure of gltph in complex with tboa (see paper)
34% identity, 91% coverage: 25:427/445 of query aligns to 6:405/407 of 2nwwA
5e9sA Crystal structure of substrate-bound glutamate transporter homologue glttk (see paper)
35% identity, 94% coverage: 10:427/445 of query aligns to 2:414/427 of 5e9sA
- binding aspartic acid: R274 (≠ A294), S275 (= S295), S276 (= S296), T313 (= T333), G353 (≠ A373), V354 (≠ I374), A357 (≠ G377), G358 (= G378), D394 (≠ G407), R397 (= R410), T398 (= T411)
- binding decyl-beta-d-maltopyranoside: L194 (≠ I214), G198 (≠ W218), Y202 (≠ L222)
- binding sodium ion: Y87 (≠ F105), T90 (= T108), S91 (≠ T109), S276 (= S296), G305 (= G325), A306 (= A326), T307 (= T327), N309 (= N329), N309 (= N329), M310 (= M330), D311 (= D331), S348 (= S368), I349 (= I369), G350 (= G370), T351 (= T371), N401 (= N414), V402 (= V415), D405 (= D418)
O59010 Glutamate transporter homolog; Glt(Ph); Sodium-aspartate symporter Glt(Ph); Sodium-dependent aspartate transporter from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
34% identity, 91% coverage: 25:431/445 of query aligns to 15:418/425 of O59010
- S65 (= S81) mutation to V: Strongly decreased chloride conductance.
- R276 (≠ A294) mutation to S: Increased rate of aspartate transport; when associated with R-395.
- RSS 276:278 (≠ ASS 294:296) binding L-aspartate
- M311 (= M330) mutation to A: Decreased dependence of aspartate binding on Na(+) concentration.
- T314 (= T333) binding L-aspartate
- V355 (≠ I374) binding L-aspartate
- D394 (≠ G407) binding L-aspartate
- M395 (= M408) mutation to R: Increased rate of aspartate transport; when associated with S-276.
- R397 (= R410) mutation to A: Strongly decreased affinity for aspartate.
- N401 (= N414) binding L-aspartate
- D405 (= D418) mutation to N: Strongly decreased affinity for aspartate.
6xwnB Structure of glutamate transporter homologue glttk in the presence of tboa inhibitor (see paper)
35% identity, 94% coverage: 10:427/445 of query aligns to 2:414/426 of 6xwnB
6zl4A The structure of glutamate transporter homologue glttk in complex with the photo switchable compound (cis) (see paper)
35% identity, 93% coverage: 13:427/445 of query aligns to 2:411/424 of 6zl4A
- binding decyl-beta-d-maltopyranoside: L3 (= L14), L191 (≠ I214), G195 (≠ W218), R282 (≠ K305)
- binding (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid: R271 (≠ A294), S272 (= S295), S273 (= S296), M307 (= M330), T310 (= T333), G353 (= G376), A354 (≠ G377), R394 (= R410), T395 (= T411)
6zgbA Glutamate transporter homologue glttk in complex with a photo cage compound (see paper)
35% identity, 93% coverage: 13:427/445 of query aligns to 3:412/425 of 6zgbA
6x15A Inward-facing state of the glutamate transporter homologue gltph in complex with l-aspartate and sodium ions (see paper)
34% identity, 91% coverage: 25:431/445 of query aligns to 15:418/419 of 6x15A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: F46 (≠ P62), F46 (≠ P62), P75 (≠ S91), L91 (≠ F107), F95 (≠ I111), L130 (= L151), I133 (≠ N154), I159 (= I184), Y167 (≠ Q192), K196 (≠ I214), G200 (≠ W218), I207 (≠ Y225), F210 (= F228), L250 (= L265), I262 (≠ L280), M269 (≠ Q287), T334 (≠ S353), V335 (= V354), G336 (≠ I355), T340 (≠ L359), L343 (≠ T362), M399 (≠ A412)
- binding aspartic acid: S277 (= S295), S278 (= S296), T314 (= T333), G354 (≠ A373), A358 (≠ G377), G359 (= G378), D394 (≠ G407), R397 (= R410), T398 (= T411)
- binding sodium ion: Y89 (≠ F105), T92 (= T108), S93 (≠ T109), G306 (= G325), T308 (= T327), N310 (= N329), N310 (= N329), M311 (= M330), D312 (= D331), S349 (= S368), I350 (= I369), T352 (= T371), N401 (= N414), V402 (= V415), D405 (= D418)
Sites not aligning to the query:
6x14A Inward-facing state of the glutamate transporter homologue gltph in complex with tfb-tboa (see paper)
34% identity, 91% coverage: 25:427/445 of query aligns to 12:411/413 of 6x14A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: G66 (= G85), V83 (≠ L102), I157 (= I185), Y164 (≠ Q192), K193 (≠ I214), T305 (= T327), I306 (= I328), I347 (= I369)
- binding (2~{S},3~{S})-2-azanyl-3-[[3-[[4-(trifluoromethyl)phenyl]carbonylamino]phenyl]methoxy]butanedioic acid: I13 (≠ V26), M199 (= M220), S275 (= S296), T311 (= T333), G356 (= G378), L384 (≠ I400), D391 (≠ G407), R394 (= R410)
Sites not aligning to the query:
6bavA Crystal structure of gltph r397c in complex with s-benzyl-l-cysteine (see paper)
34% identity, 91% coverage: 25:430/445 of query aligns to 7:409/409 of 6bavA
6r7rA Crystal structure of the glutamate transporter homologue glttk in complex with d-aspartate (see paper)
34% identity, 91% coverage: 22:427/445 of query aligns to 4:403/416 of 6r7rA
- binding d-aspartic acid: R263 (≠ A294), S265 (= S296), M299 (= M330), T302 (= T333), T340 (= T371), G342 (≠ A373), V343 (≠ I374), G347 (= G378), D383 (≠ G407), R386 (= R410), T387 (= T411), N390 (= N414)
- binding decyl-beta-d-maltopyranoside: H23 (≠ P42), V212 (≠ F243), A216 (≠ G247)
6bauA Crystal structure of gltph r397c in complex with l-cysteine (see paper)
34% identity, 91% coverage: 25:427/445 of query aligns to 7:406/408 of 6bauA