Comparing WP_024851865.1 NCBI__GCF_000526715.1:WP_024851865.1 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
34% identity, 93% coverage: 1:212/229 of query aligns to 6:220/240 of 1ji0A
6mjpA Lptb(e163q)fgc from vibrio cholerae (see paper)
30% identity, 94% coverage: 10:225/229 of query aligns to 11:231/240 of 6mjpA
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
32% identity, 88% coverage: 10:210/229 of query aligns to 11:215/234 of 6b89A
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
32% identity, 88% coverage: 10:210/229 of query aligns to 11:215/234 of 4p31A
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
32% identity, 88% coverage: 10:210/229 of query aligns to 11:215/233 of 6b8bA
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
32% identity, 88% coverage: 10:210/229 of query aligns to 11:215/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
32% identity, 88% coverage: 10:210/229 of query aligns to 11:215/238 of 6s8gA
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
31% identity, 91% coverage: 1:208/229 of query aligns to 17:225/378 of P69874
Sites not aligning to the query:
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
32% identity, 88% coverage: 10:210/229 of query aligns to 11:215/235 of 6mhzA
3c4jA Abc protein artp in complex with atp-gamma-s
31% identity, 100% coverage: 1:228/229 of query aligns to 3:239/242 of 3c4jA
3c41J Abc protein artp in complex with amp-pnp/mg2+
31% identity, 100% coverage: 1:228/229 of query aligns to 3:239/242 of 3c41J
2olkA Abc protein artp in complex with adp-beta-s
31% identity, 100% coverage: 1:228/229 of query aligns to 3:239/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
31% identity, 100% coverage: 1:228/229 of query aligns to 3:239/242 of 2oljA
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
32% identity, 90% coverage: 17:221/229 of query aligns to 268:485/501 of P04983
Sites not aligning to the query:
6mbnA Lptb e163q in complex with atp (see paper)
32% identity, 88% coverage: 10:210/229 of query aligns to 12:216/241 of 6mbnA
1g6hA Crystal structure of the adp conformation of mj1267, an atp-binding cassette of an abc transporter (see paper)
31% identity, 88% coverage: 11:212/229 of query aligns to 14:231/254 of 1g6hA
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
31% identity, 88% coverage: 11:212/229 of query aligns to 14:231/253 of 1g9xB
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
29% identity, 100% coverage: 1:228/229 of query aligns to 1:237/240 of 4ymuJ
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
28% identity, 93% coverage: 16:227/229 of query aligns to 17:236/241 of 4u00A
Sites not aligning to the query:
3nhaA Nucleotide binding domain of human abcb6 (adp mg bound structure) (see paper)
33% identity, 93% coverage: 2:214/229 of query aligns to 41:261/278 of 3nhaA
>WP_024851865.1 NCBI__GCF_000526715.1:WP_024851865.1
MLDVSGVKVSYSESEVIHGVDFTLGQEETLAIMGRNGMGKTTLFKSLIGALPLSDGSISI
EGEDVSKMQSYERVHKGIAYVPQGRMIFPQLTVLDNILAGMSQAPSKRVPEDIYALFPVL
FDMRHRKGGNLSGGQQQQLAIARALVTNPKVLLLDEPTEGIQPSIIKDIANALNEIKKLR
NISIIVSEQVLSFTMAVADRIIVIEKGKFIHEDLRENVDEKQVSQFLSI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory